BAC Information

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BAC

Clone NameB6Ng01-254D13
Chromosome3 (Build37)
Map Location 46,812,113 - 46,813,300
singlet/doubletsinglet
Overlap genenone
Upstream geneEG241989
Downstream geneLOC545517, LOC383849, LOC383850, LOC100039426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254D13.bB6Ng01-254D13.g
ACCGA060748GA060749
length1,179560
definitionB6Ng01-254D13.b B6Ng01-254D13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatacttatttttctttcaggataaacacattagataatctaat
gaagactgcatcattgaaattctacaagcatttgtgtttattttatttat
tttttctgacatgattctattagaataattatattttagattaatataca
acatacaattgtacattattttcatagtttaatatgaaaactgtatgtaa
atctcagactacttttattaactataaatatctaattcacaaagcaggga
gtcaccccactggactatagcttcctaacctccaatctagggaaggctaa
aagcctgtaaaacaagattcaggtaacatacttaaatacctaaggacact
gttcaaccttctcaatgccctgttttgattttttttcctcattcgacacc
agaatttaaaactgcctcagtctttatttcaataagtcttggattaactc
catttgttataagttggagtaaagtattccttacctgcttaatttcctcc
atacaagttgcctttgtaattgtcgaaatccaggctagtaatagaatgat
gaaaggtagttagaaactgctggaacatctccagaaaacaaactgagcag
cctgacagccactgcactgagtaaagacatagctgttctaaagataagat
agatcagatagatgtgtgagacagacagacagacagacagacagaaggat
agactataaggtagatagttaagatggatagatacacataaaataatagt
ccaaagaaaattatgctatgatcaagcagttcttattcaaatatatgtgt
tccataaagacttcaaaattctatcaagggattatgaaatgatgccttca
attacctgtagctgaagatacatcaaagcatattatatataaggaaattt
aaatccatttttaagattatagaaatgtctgagagacagcagaatgcaag
cttattaggataaaccacttgaacattaaaatcaattcatatgaaaaggt
taacatcaagtttactagatgggagaggagagtgagagcacaatttaatg
ctctgcatgtgttaggtaataaatatagaatgatacaaaaatgatccaca
atttggatacaaaaatttcgcatagtatctatataaaaaatcttttataa
gaggattcaaaattattgttgtgaataaa

acaattgaggaatttcacacctaaagaaatggtcaaagtccttagtgatc
agagaaatgcaaatcaaaatgaccctcagattccaccttacaccagttag
aatggctacgatcaaatcctcaggtgccaacacatgttggtgaggatgtg
gagaaagatgaacactcctccattgctggtggaattgcaaagtggtacaa
acactctggaaatcaatctggacgtccctcagaaaattagaaataggtct
acctgaagacccagatataccactcttgagaatatacccaaaagataccc
caccatgccacaggggcatgtgttccactatgttcctagcagccttattt
gtgatagtcagaagctggaaacaacctagatgccccatcacagaagaatg
gatacagaaaacgtggttcatttacacagtggaatactactcagctatta
agaatgagggcatcctgacttttgcaggcaaatggatggaactagaaaat
atcatcttgactgagatagggacattcacattgagactgggtggggtggg
taggaggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_46812113_46813300
seq2: B6Ng01-254D13.b_49_1227

seq1  GAATTCTATACTTATTTTTCTTTCAGGATAAACACATTAGATAATCTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATACTTATTTTTCTTTCAGGATAAACACATTAGATAATCTAAT  50

seq1  GAAGACTGCATCATTGAAATTCTACAAGCATTTGTGTTTATTTTATTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTGCATCATTGAAATTCTACAAGCATTTGTGTTTATTTTATTTAT  100

seq1  TTTTTCTGACATGATTCTATTAGAATAATTATATTTTAGATTAATATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGACATGATTCTATTAGAATAATTATATTTTAGATTAATATACA  150

seq1  ACATACAATTGTACATTATTTTCATAGTTTAATATGAAAACTGTATGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAATTGTACATTATTTTCATAGTTTAATATGAAAACTGTATGTAA  200

seq1  ATCTCAGACTACTTTTATTAACTATAAATATCTAATTCACAAAGCAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGACTACTTTTATTAACTATAAATATCTAATTCACAAAGCAGGGA  250

seq1  GTCACCCCACTGGACTATAGCTTCCTAACCTCCAATCTAGGGAAGGCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCCACTGGACTATAGCTTCCTAACCTCCAATCTAGGGAAGGCTAA  300

seq1  AAGCCTGTAAAACAAGATTCAGGTAACATACTTAAATACCTAAGGACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGTAAAACAAGATTCAGGTAACATACTTAAATACCTAAGGACACT  350

seq1  GTTCAACCTTCTCAATGCCCTGTTTTGATTTTTTTTCCTCATTCGACACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACCTTCTCAATGCCCTGTTTTGATTTTTTTTCCTCATTCGACACC  400

seq1  AGAATTTAAAACTGCCTCAGTCTTTATTTCAATAAGTCTTGGATTAACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTAAAACTGCCTCAGTCTTTATTTCAATAAGTCTTGGATTAACTC  450

seq1  CATTTGTTATAAGTTGGAGTAAAGTATTCCTTACCTGCTTAATTTCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTATAAGTTGGAGTAAAGTATTCCTTACCTGCTTAATTTCCTCC  500

seq1  ATACAAGTTGCCTTTGTAATTGTCGAAATCCAGGCTAGTAATAGAATGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGTTGCCTTTGTAATTGTCGAAATCCAGGCTAGTAATAGAATGAT  550

seq1  GAAAGGTAGTTAGAAACTGCTGGAACATCTCCAGAAAACAAACTGAGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTAGTTAGAAACTGCTGGAACATCTCCAGAAAACAAACTGAGCAG  600

seq1  CCTGACAGCCACTGCACTGAGTAAAGACATAGCTGTTCTAAAGATAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACAGCCACTGCACTGAGTAAAGACATAGCTGTTCTAAAGATAAGAT  650

seq1  AGATCAGATAGATGTGTGAGACAGACAGACAGACAGACAGACAGAAGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGATAGATGTGTGAGACAGACAGACAGACAGACAGACAGAAGGAT  700

seq1  AGACTATAAGGTAGATAGTTAAGATGGATAGATACACATAAAATAATAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATAAGGTAGATAGTTAAGATGGATAGATACACATAAAATAATAGT  750

seq1  CCAAAGAAAATTATGCTATGATCAAGCAGTTCTTATTCAAATATATGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAAAATTATGCTATGATCAAGCAGTTCTTATTCAAATATATGTGT  800

seq1  TCCATAAAGACTTCAAAATTCTATCAAGGGATTATGAAATGATGCCTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAAAGACTTCAAAATTCTATCAAGGGATTATGAAATGATGCCTTCA  850

seq1  ATTACCTGTAGCTGAAGATACATCAAAGCATATTATATATAAGGAAATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTGTAGCTGAAGATACATCAAAGCATATTATATATAAGGAAATTT  900

seq1  AAATCCATTTTTAAGATTATAGAAATGTCTGAGAGACAGCAGAATGCAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCATTTTTAAGATTATAGAAATGTCTGAGAGACAGCAGAATGCAAG  950

seq1  CTTATTAGGATAAACCACTTGAACATTAAAATCAATTCATATGAAAAGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAGGATAAACCACTTGAACATTAAAATCAATTCATATGAAAAGGT  1000

seq1  TAACATCAAGTTTACTAAGATGGGAGAGGAGAGTGAGAGCACAATTTAAT  1050
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAACATCAAGTTTACT-AGATGGGAGAGGAGAGTGAGAGCACAATTTAAT  1049

seq1  GCTCTGCATGTGTTAGGTAATAAATATAAGAAATTGATACAAAAATGATC  1100
      ||||||||||||||||||||||||||| ||||  ||||||||||||||||
seq2  GCTCTGCATGTGTTAGGTAATAAATAT-AGAA--TGATACAAAAATGATC  1096

seq1  CCAACAAATTTGATACAAAAAATTTTCGCATAGTATCTATATAAAAAATC  1150
      |  |||| || ||||||||||  |||||||||||||||||||||||||||
seq2  C--ACAATTTGGATACAAAAA--TTTCGCATAGTATCTATATAAAAAATC  1142

seq1  TTTTATAAGAGATTTAAAAATTATTGTTGTGAAATAAA  1188
      |||||||||||  || ||||||||||||||| ||||||
seq2  TTTTATAAGAGGATTCAAAATTATTGTTGTG-AATAAA  1179


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