BAC Information

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BAC

Clone NameB6Ng01-255L01
Chromosome3 (Build37)
Map Location 5,319,922 - 5,320,876
singlet/doubletsinglet
Overlap geneZfhx4
Upstream geneLOC620283
Downstream genePxmp3, EG620382, EG667759, LOC100041165, LOC100041193, EG620570
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255L01.bB6Ng01-255L01.g
ACCGA061836GA061837
length956812
definitionB6Ng01-255L01.b B6Ng01-255L01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatctgctcaaactaggaaccaagagtatttttaatcattttttt
tcctgtggcaaaccacatgcttagccaagcaaccaagatatatcaagtat
catatatagactaaatttgcaggctgttggtacttctgctctcttgcttg
ttaatagccatactattatcttcctcaccatgtttattaaatttaatgct
ggatgttggacatttgaaaaatttagaggtgaacgaaataagggtgtatt
agtctgtgccttcatgaagcttacagattgggagagaaaatagacattta
tcaaccaaatattctattatataattattgatgagctacatattccaaaa
gattatatacaatatagcaagaaactagtcagatgtcttaagattaaaaa
gaaaaaaaaaacctcttaagttaaaatatttgagtttaggacacaaatag
gaataagaagcaaaaatgagaagaaaagcattctattctaagggaattct
gagggctttttaatgttaaatgaattttatccatagaagggctaatatta
gctatgagatttggtgtaaaacgaaaagatgaaaaaggaagaagtcattg
ataaagttgggtaggagccatcaacatgaaggacctcagacaggaccata
aaggtaactctcaaagtggaggggaatgggtatcaaaaagtcactccagc
tgaggttagttataaaaaccctgtatagcttcttggccttttggctaaga
tcatgtgtaaaaacactataggttttctgctaagaggaaagggaagcaat
agaagagtactagtagggactgaattgatcagtttatcatcatcaagtaa
agtctttcattaccatacctaccctttccccacttatttttcttatttca
tttttcttgacacttttgtaaaaataaatttcatttaaatttgtgtgtgt
gtgtgt

gaattcaaggcccaaacctaaacttaatcaaagcaatgcacaacaaacca
ctagacaacatcaaattaaatggagagaagttggaagcaatcctactaaa
atcatgaactagatgaggctgtacactttctccctatctattcaatttaa
tacttgaagtcctaaccagagcagtttgacaataaaaggggatcaaaggg
atacaaattataaatgaagaagtcaaaatatcactatttgcagatgatat
gataatatatatgtgaccccaaaaattctaccagagaactcctaaacctg
ataaacagcttcagtgcagtagttggacataaaattaactcaaacaaatc
aatagcctttctgaacacaaaggatgaacaggctgagaaagaaattaggg
aaacaacacccttcataataatcacaaataaataaaataccatggtgtga
cactatcgaaggaagtgaaagacctgtattataagtactttaagtctctg
aagacagaaatctaagaagatctcagaagatggaaagatctcccatgctc
atggattggcaggattaacatagtcacaatggctatcttgctgaaagcaa
tctacagattcaatgcaatccccatcaaaagtccaattcaattcttcact
gagttagaaagggcaatttgcaaattcacccggaataacaaaaaacctag
gatagcaaaaactattctcaacaacaaaagaacctctgggggaattacca
tgccttgaccctcaagctgtattacagaaaaattttgattaaaaattgca
tgatgctggtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_5319922_5320876
seq2: B6Ng01-255L01.b_42_997

seq1  GAATTCATCTGCTCAAACTAGGAACCAAGAGTATTTTTAATCATTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGCTCAAACTAGGAACCAAGAGTATTTTTAATCATTTTTTT  50

seq1  TCCTGTGGCAAACCACATGCTTAGCCAAGCAACCAAGATATATCAAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGGCAAACCACATGCTTAGCCAAGCAACCAAGATATATCAAGTAT  100

seq1  CATATATAGACTAAATTTGCAGGCTGTTGGTACTTCTGCTCTCTTGCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATAGACTAAATTTGCAGGCTGTTGGTACTTCTGCTCTCTTGCTTG  150

seq1  TTAATAGCCATACTATTATCTTCCTCACCATGTTTATTAAATTTAATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGCCATACTATTATCTTCCTCACCATGTTTATTAAATTTAATGCT  200

seq1  GGATGTTGGACATTTGAAAAATTTAGAGGTGAACGAAATAAGGGTGTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTGGACATTTGAAAAATTTAGAGGTGAACGAAATAAGGGTGTATT  250

seq1  AGTCTGTGCCTTCATGAAGCTTACAGATTGGGAGAGAAAATAGACATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTGCCTTCATGAAGCTTACAGATTGGGAGAGAAAATAGACATTTA  300

seq1  TCAACCAAATATTCTATTATATAATTATTGATGAGCTACATATTCCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCAAATATTCTATTATATAATTATTGATGAGCTACATATTCCAAAA  350

seq1  GATTATATACAATATAGCAAGAAACTAGTCAGATGTCTTAAGATTAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATATACAATATAGCAAGAAACTAGTCAGATGTCTTAAGATTAAAAA  400

seq1  GAAAAAAAAAACCTCTTAAGTTAAAATATTTGAGTTTAGGACACAAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAAACCTCTTAAGTTAAAATATTTGAGTTTAGGACACAAATAG  450

seq1  GAATAAGAAGCAAAAATGAGAAGAAAAGCATTCTATTCTAAGGGAATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGAAGCAAAAATGAGAAGAAAAGCATTCTATTCTAAGGGAATTCT  500

seq1  GAGGGCTTTTTAATGTTAAATGAATTTTATCCATAGAAGGGCTAATATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTTTTTAATGTTAAATGAATTTTATCCATAGAAGGGCTAATATTA  550

seq1  GCTATGAGATTTGGTGTAAAACGAAAAGATGAAAAAGGAAGAAGTCATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGAGATTTGGTGTAAAACGAAAAGATGAAAAAGGAAGAAGTCATTG  600

seq1  ATAAAGTTGGGTAGGAGCCATCAACATGAAGGACCTCAGACAGGACCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTGGGTAGGAGCCATCAACATGAAGGACCTCAGACAGGACCATA  650

seq1  AAGGTAACTCTCAAAGTGGAGGGGAATGGGTATCAAAAAGTCACTCCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAACTCTCAAAGTGGAGGGGAATGGGTATCAAAAAGTCACTCCAGC  700

seq1  TGAGGTTAGTTATAAAAACCCTGTATAGCTTCTTGGCCTTTTGGCTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTAGTTATAAAAACCCTGTATAGCTTCTTGGCCTTTTGGCTAAGA  750

seq1  TCATGTGTAAAAACACTATAGGTTTTCTGCTAAGAGGAAAGGGAAGCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGTAAAAACACTATAGGTTTTCTGCTAAGAGGAAAGGGAAGCAAT  800

seq1  AGAAGAGTACTAGTAGGGACTGAATTGATCAGTTTATCATCATCAAGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGTACTAGTAGGGACTGAATTGATCAGTTTATCATCATCAAGTAA  850

seq1  AGTCTTTCATTACCATACCTACCC-TTCCCCACTTATTTTTCTTATTTCA  899
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGTCTTTCATTACCATACCTACCCTTTCCCCACTTATTTTTCTTATTTCA  900

seq1  TTTTTCTTGACACTTTTGTAAAAATAAATTTCATTTAAATTTGTGTGTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTGACACTTTTGTAAAAATAAATTTCATTTAAATTTGTGTGTGT  950

seq1  GTGTGT  955
      ||||||
seq2  GTGTGT  956


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