BAC Information

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BAC

Clone NameB6Ng01-257O06
Chromosome3 (Build37)
Map Location 75,043,666 - 75,044,820
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC619764, LOC667434, LOC100041551, EG667459, BC050789
Downstream geneSerpini2, Wdr49, Pdcd10, Serpini1, Golph4, Fstl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257O06.bB6Ng01-257O06.g
ACCGA063472GA063473
length1,2191,154
definitionB6Ng01-257O06.b B6Ng01-257O06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttggatta
ttttcctgccgtctactcctcttgggtgaatttgcttcctttttttctag
agcttttagatgtgttgtcaagcttgctagtatgtgctctctcccggttt
tttcttgaaggcactcattagctaatgaggtttccctcttagaaaatgct
tttaattgtgttcccaaaggtttggggtacgtgtggctttcatttcaatt
aaactctaaaaaggtcttattttctttctttattcttcctttgaccaagt
atacattgagagagtgttgttcagttcaatgtgaatgtggcttcgtatat
tttattgtatgaagatcagcctagtgacagggatccgaaagtgataccag
tgtggtgaaacgatatatc

gaattcactacaattgaaaggggagattgaaagagctaatctgggaagta
aattgccaaccgtgcttccaggtcagagtcaagcaggaactatgtagctt
gaacgcacaccaaaaagttgtctctcttccttagcagctaaaattctctc
cttttaaggcaaataacacaccagtaaagagaatgaagttaagaaacaaa
aaaatcaatcttccatagaacatacttggctccatagtagagaattaaag
ataagcatttagcaaattttattgaagaaaagcaaacgtactttattttc
aaaaacatgttcttgaacttaaaattagcttcacctaattacagcacctc
aattattaaagcgtctctcatttcctaatcgttgtctttattaaggacat
tcatttcaccacttcacgtcagcttcttactgtatttgccccctgtttac
tgcttgtcagcaaccagcaacagctcctctgacctctgaggtcagagacc
ttgttagttttgttcccagttataactagggcccagaacagtgcccggag
gctggcgtgagctccattaatgtttgggaaattaataaatgaaatcccat
accagactgaaatgtagaacctggaagaggattacaataattgtccagta
atacaggcaaattagaaaacataccatttcttaatgaagagaacatctat
tctcaactgagccccattctttctgaaagcacaaagtgtatttctttttt
ttttaattttggatgtttatggatgtgatgttgtgcatgtgtaagcatga
gttttatatgtaggtatctgtatgatatatgtccacatgtatgtgtatgt
accctgtccatgcactagagttcaaaggaggattgtcagtatcctgctct
atcactcttcactttattctactgagtcagttctctcatggaatctgagc
taggctggtgaccatcaagccccagtgatgatcctgcacccatcctccac
agtgatagagcagtcacacagtcacacagtcacacagtaataccgagtac
acagtaacacagcagtaccacagcacatctggtgctttcatggtgggctc
ctggaatctggcactcagtcttcatgccttgagtatctatgtgttaattt
tatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75043666_75044820
seq2: B6Ng01-257O06.g_69_1222

seq1  GAATTCACTACAATTGAAAGGGGAGATTGAAAGAGCTAATCTGGGAAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTACAATTGAAAGGGGAGATTGAAAGAGCTAATCTGGGAAGTA  50

seq1  AATTGCCAACCGTGCTTCCAGGTCAGAGTCAAGCAGGAACTATGTAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCCAACCGTGCTTCCAGGTCAGAGTCAAGCAGGAACTATGTAGCTT  100

seq1  GAACGCACACCAAAAAGTTGTCTCTCTTCCTTAGCAGCTAAAATTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGCACACCAAAAAGTTGTCTCTCTTCCTTAGCAGCTAAAATTCTCTC  150

seq1  CTTTTAAGGCAAATAACACACCAGTAAAGAGAATGAAGTTAAGAAACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAGGCAAATAACACACCAGTAAAGAGAATGAAGTTAAGAAACAAA  200

seq1  AAAATCAATCTTCCATAGAACATACTTGGCTCCATAGTAGAGAATTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAATCTTCCATAGAACATACTTGGCTCCATAGTAGAGAATTAAAG  250

seq1  ATAAGCATTTAGCAAATTTTATTGAAGAAAAGCAAACGTACTTTATTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCATTTAGCAAATTTTATTGAAGAAAAGCAAACGTACTTTATTTTC  300

seq1  AAAAACATGTTCTTGAACTTAAAATTAGCTTCACCTAATTACAGCACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATGTTCTTGAACTTAAAATTAGCTTCACCTAATTACAGCACCTC  350

seq1  AATTATTAAAGCGTCTCTCATTTCCTAATCGTTGTCTTTATTAAGGACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTAAAGCGTCTCTCATTTCCTAATCGTTGTCTTTATTAAGGACAT  400

seq1  TCATTTCACCACTTCACGTCAGCTTCTTACTGTATTTGCCCCCTGTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCACCACTTCACGTCAGCTTCTTACTGTATTTGCCCCCTGTTTAC  450

seq1  TGCTTGTCAGCAACCAGCAACAGCTCCTCTGACCTCTGAGGTCAGAGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTCAGCAACCAGCAACAGCTCCTCTGACCTCTGAGGTCAGAGACC  500

seq1  TTGTTAGTTTTGTTCCCAGTTATAACTAGGGCCCAGAACAGTGCCCGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGTTTTGTTCCCAGTTATAACTAGGGCCCAGAACAGTGCCCGGAG  550

seq1  GCTGGCGTGAGCTCCATTAATGTTTGGGAAATTAATAAATGAAATCCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCGTGAGCTCCATTAATGTTTGGGAAATTAATAAATGAAATCCCAT  600

seq1  ACCAGACTGAAATGTAGAACCTGGAAGAGGATTACAATAATTGTCCAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACTGAAATGTAGAACCTGGAAGAGGATTACAATAATTGTCCAGTA  650

seq1  ATACAGGCAAATTAGAAAACATACCATTTCTTAATGAAGAGAACATCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGCAAATTAGAAAACATACCATTTCTTAATGAAGAGAACATCTAT  700

seq1  TCTCAACTGAGCCCCATTCTTTCTGAAAGCACAAAGTGTATTTCTTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACTGAGCCCCATTCTTTCTGAAAGCACAAAGTGTATTTCTTTTTT  750

seq1  TTTTAATTTTGGATGTTTATGGATGTGATGTTGTGCATGTGTAAGCATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTTTGGATGTTTATGGATGTGATGTTGTGCATGTGTAAGCATGA  800

seq1  GTTTTATATGTAGGTATCTGTATGATATATGTCCACATGTATGTGTATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATATGTAGGTATCTGTATGATATATGTCCACATGTATGTGTATGT  850

seq1  A-CCTGTCCATGCACTAGAGTTCAAAGGAGGA-TGTCAGGTATCCTGCTC  898
      | |||||||||||||||||||||||||||||| ||||| |||||||||||
seq2  ACCCTGTCCATGCACTAGAGTTCAAAGGAGGATTGTCA-GTATCCTGCTC  899

seq1  TATCACTCTTCACTTTATTCTACTGAGTCAAGTTCTCTCATGGAATCTGA  948
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TATCACTCTTCACTTTATTCTACTGAGTC-AGTTCTCTCATGGAATCTGA  948

seq1  GCTAGGCTGGTGACCATCAAGCCCCAGTGATGATCCTGCACCCATCCTCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGCTGGTGACCATCAAGCCCCAGTGATGATCCTGCACCCATCCTCC  998

seq1  ACAGTGATAGAGCAGTCACACAGTCACACAGTCACACAGTAATACCGGAG  1048
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACAGTGATAGAGCAGTCACACAGTCACACAGTCACACAGTAATACC-GAG  1047

seq1  TAACACAGTAACACAGCAGTAACACAGCAACATCCTGTGCTTTTCAT-GT  1097
      | ||||||||||||||||||| |||||| |||||  |||| |||||| ||
seq2  T-ACACAGTAACACAGCAGTACCACAGC-ACATCTGGTGC-TTTCATGGT  1094

seq1  GGGCT-CTGGGATCT-GCACTCAGTTCCTCATGC--TGAGTATCATGTGG  1143
      ||||| |||| |||| |||||||| || ||||||  |||||||| | || 
seq2  GGGCTCCTGGAATCTGGCACTCAG-TCTTCATGCCTTGAGTATC-TATGT  1142

seq1  GTTATTTTTATC  1155
      |||| |||||||
seq2  GTTAATTTTATC  1154


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