BAC Information

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BAC

Clone NameB6Ng01-258B10
Chromosome3 (Build37)
Map Location 158,776,870 - 158,778,076
singlet/doubletsinglet
Overlap genenone
Upstream geneLrrc7, LOC100041008, LOC668905
Downstream geneLOC668907, Depdc1a, Rpe65, Gpr177
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258B10.bB6Ng01-258B10.g
ACCGA063617GA063618
length1,177872
definitionB6Ng01-258B10.b B6Ng01-258B10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctgcctattagctataggaaatcctatatcagtaagaaact
actactagacatgagagcaagaccatgatgaatatcttggctctagtgaa
gcctatgattactcctcgtatatgtgtgtaggcccaaataatatcaccaa
atgtagagcagatacaaaaaaggcttaggctttagactttaattctttga
aataacttatgatggagaaatggataattgattaagttttcataacacta
aacagttttctttggtatttaactgtttatgaagatagtaaaagttgaga
cttgaattgacactaaagattgtgttaataagttaactacttaccaatat
tccaaagataacccagtttaaaagagaaagaaatgcccttgaaaggactt
tcttggtattagagtaaaaagatctaaatatgtctcctgttttctattct
tcttagatgttctgttgcatatgtcagtgacctcagtttaataagaactg
aaatatatgtattgaaagagctttagatactatttactgcctacatacat
acataaatgctttatttatttatttatttatttatatgtacatttgtgtg
agcctgcatatttttatgtgcaccatgtgctgtagaggccagaaaaggac
atagaatgccatgcaaatggaatttgagtttgtatgagccacccaatatt
ggttgaattcaggttctggaagagcaatgtctgttcttaaccactgaaac
cttgggtagccccatgtttcagttgtgtggtgtgtgtatgtgtgtgtgtc
ttgaaaattaaatgaagtaatgtatagatatctgtaacaaaatctgtggt
gtagtgtatgtcctgtgtaagttcaaaccatttctcaagtgcaatgagtg
ccttacaatgttttcttacttaacaatgaataattagaaaaattggagac
ataagcatgcaagacaactaaatagataaacattcacttgcctgtcctca
acattccaccccaaaagatatttgctctaacattcatcattggtgatctt
agagcagagtggcgatccagctactctcctacaatcagctcttctcaaca
acaatcagaaccaatccttgggatcctggaatcatgtaggcccttggcaa
tggcgttgggtgaagctctagtaaatg

gaattccaagcttaaatatctgttttacttagctcagtcttcaaatttca
tggggcttagaaatatttgcaccccaaactgcatcctttcctacattttt
tcattattctgaatcccgtaagaatttaaaatattttcatattagttttt
tgcctgtagatatccaactgcagaatacactgatgatccttgtgcttgct
tcaccagagttttttttaattgccttaacttaatgcttctgtcttgtctt
tttttatctaaacatgaaataaagagacataaatttcataaccctattat
gttactaattgcaactgctttaatatttcctagcttcaaatgaagaccaa
agtgtggacactttgccccttcttagaattgggaacaaaacacccatgga
aggagttacagagacaaagtttggagctgagacgaaagtatggaccatct
agagactgccatacccggggatccatcccataatcagcctccaaacgctg
acaccattgcatacactagcaagattttgctgaaaggaccctgatatagc
tgtctcttttgaaactatgctggggcctagcaaccacagaagtggatgct
cacagtcagctattggatcacagggcccccaatggaggagctagagaaag
tatccaaggagctaaagggatctgcaatcctataggtggaacaacaatat
gaactaaccagtactcccccctcccccatcccgagctcatgtctctagct
gcatatgtatcagaagatggcctagtcagccatcagtggaaagagaggcc
cattggtcgtgcaaactttatatgcctcagtacaggagaacaccagggcc
caagaagtgggcgtgggtgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_158776870_158778076
seq2: B6Ng01-258B10.b_46_1222

seq1  GAATTCATTCTGCCTATTAGCTATAGGAAATCCTATATCAGTAAGAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTGCCTATTAGCTATAGGAAATCCTATATCAGTAAGAAACT  50

seq1  ACTACTAGACATGAGAGCAAGACCATGATGAATATCTTGGCTCTAGTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTAGACATGAGAGCAAGACCATGATGAATATCTTGGCTCTAGTGAA  100

seq1  GCCTATGATTACTCCTCGTATATGTGTGTAGGCCCAAATAATATCACCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATGATTACTCCTCGTATATGTGTGTAGGCCCAAATAATATCACCAA  150

seq1  ATGTAGAGCAGATACAAAAAAGGCTTAGGCTTTAGACTTTAATTCTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAGCAGATACAAAAAAGGCTTAGGCTTTAGACTTTAATTCTTTGA  200

seq1  AATAACTTATGATGGAGAAATGGATAATTGATTAAGTTTTCATAACACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTTATGATGGAGAAATGGATAATTGATTAAGTTTTCATAACACTA  250

seq1  AACAGTTTTCTTTGGTATTTAACTGTTTATGAAGATAGTAAAAGTTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTTCTTTGGTATTTAACTGTTTATGAAGATAGTAAAAGTTGAGA  300

seq1  CTTGAATTGACACTAAAGATTGTGTTAATAAGTTAACTACTTACCAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATTGACACTAAAGATTGTGTTAATAAGTTAACTACTTACCAATAT  350

seq1  TCCAAAGATAACCCAGTTTAAAAGAGAAAGAAATGCCCTTGAAAGGACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGATAACCCAGTTTAAAAGAGAAAGAAATGCCCTTGAAAGGACTT  400

seq1  TCTTGGTATTAGAGTAAAAAGATCTAAATATGTCTCCTGTTTTCTATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTATTAGAGTAAAAAGATCTAAATATGTCTCCTGTTTTCTATTCT  450

seq1  TCTTAGATGTTCTGTTGCATATGTCAGTGACCTCAGTTTAATAAGAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGATGTTCTGTTGCATATGTCAGTGACCTCAGTTTAATAAGAACTG  500

seq1  AAATATATGTATTGAAAGAGCTTTAGATACTATTTACTGCCTACATACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATGTATTGAAAGAGCTTTAGATACTATTTACTGCCTACATACAT  550

seq1  ACATAAATGCTTTATTTATTTATTTATTTATTTATATGTACATTTGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATGCTTTATTTATTTATTTATTTATTTATATGTACATTTGTGTG  600

seq1  AGCCTGCATATTTTTATGTGCACCATGTGCTGTAGAGGCCAGAAAAGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCATATTTTTATGTGCACCATGTGCTGTAGAGGCCAGAAAAGGAC  650

seq1  ATAGAATGCCATGCAAATGGAATTTGAGTTTGTATGAGCCACCCAATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATGCCATGCAAATGGAATTTGAGTTTGTATGAGCCACCCAATATT  700

seq1  GGTTGAATTCAGGTTCTGGAAGAGCAATGTCTGTTCTTAACCACTGAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAATTCAGGTTCTGGAAGAGCAATGTCTGTTCTTAACCACTGAAAC  750

seq1  CTTGGGTAGCCCCATGTTTCAGTTGTGTGGTGTGTGTATGTGTGTGTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTAGCCCCATGTTTCAGTTGTGTGGTGTGTGTATGTGTGTGTGTC  800

seq1  TTGAAAATTAAATGAAGTAATGTATAGATATCTGTAACAAAATCTGTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATTAAATGAAGTAATGTATAGATATCTGTAACAAAATCTGTGGT  850

seq1  GTAGTGTATGTCCTGTGTAAGTTCAAACCATTTCTCAAAGTGCAATGAGT  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTAGTGTATGTCCTGTGTAAGTTCAAACCATTTCTC-AAGTGCAATGAGT  899

seq1  GCCTTACAATGTTTTCTTACTTAACAATGAATAATTAGAAAAATTGGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTACAATGTTTTCTTACTTAACAATGAATAATTAGAAAAATTGGAGA  949

seq1  CATAAGCATGCAAAGAACAACTAAATAAGATAAAACATTCACTTGCCTGT  1000
      |||||||||||||   |||||||||| |||| ||||||||||||||||||
seq2  CATAAGCATGCAA--GACAACTAAAT-AGAT-AAACATTCACTTGCCTGT  995

seq1  CCCTTCAAACATTCCACCCCAAAAGATAATTTTGCTCTAACATTCATCAT  1050
      ||  || |||||||||||||||||||||  ||||||||||||||||||||
seq2  CC--TC-AACATTCCACCCCAAAAGATA--TTTGCTCTAACATTCATCAT  1040

seq1  TGGTGATCTTTAAGAAGCAGAAGTGGCGATCCAGCTTACTCTTCTACCAC  1100
      ||||||||||  || ||||| |||||||||||||| |||||| ||   ||
seq2  TGGTGATCTT--AG-AGCAG-AGTGGCGATCCAGC-TACTCTCCT---AC  1082

seq1  ATCCAGCTCTTCCTCAAACAACAAAACCACAGACACCATCCTGGGGTATC  1150
      |  |||||||| ||| ||||||||     ||||  | ||||| ||| |||
seq2  AATCAGCTCTT-CTC-AACAACAA----TCAGAACCAATCCTTGGG-ATC  1125

seq1  CTGGAAAATTCCATAGTAGGCCCTTTGACAATGGGGTTTGGTGAAG-TCT  1199
      ||||||     ||| |||||||| ||| |||||| ||| ||||||| |||
seq2  CTGGAA----TCAT-GTAGGCCC-TTGGCAATGGCGTTGGGTGAAGCTCT  1169

seq1  AGGAAATG  1207
      || |||||
seq2  AGTAAATG  1177


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