BAC Information

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BAC

Clone NameB6Ng01-259B18
Chromosome3 (Build37)
Map Location 64,288,490 - 64,289,675
singlet/doubletsinglet
Overlap gene4930518C23Rik
Upstream genePlch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869
Downstream geneEG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110, Kcnab1, Ssr3, EG433604
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259B18.bB6Ng01-259B18.g
ACCGA064380GA064381
length8421,185
definitionB6Ng01-259B18.b B6Ng01-259B18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttattcagctctgagccccctttttttaatggggtattttgat
tttttggagtctaccttcttgagttctttatatgtattggatattagtcc
cctatatgatttaggataggtaaagatcctttcccaatctgttggtggtc
tttttgtcttattgacggtgtcttttgccttgcagaagctttgcaacttt
atgaggtcccatttacagattctcgatcttgcagcacaagccattgctgt
tctagtcaggaatgtttcccctgtacccatatctttgaggctttttccta
cactctcctctataagtttcagtgtctctggttttatgtggaattcctta
atccacttagatttgacctcagtacaaggagataggaatagatcaatttg
cattcttttacatgataacggacagttgtgccagcaccatttgttgaaaa
tgctgtcttttttccactggatggttttagctcccttgtcaaagattaag
tgaccataggtgtgtgggttcatctctgggtcttcaattctttttcattg
gtcaacttgtctgtcgctataccagtaccatgcagtttttatcacaattg
ctttgtagtacagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttactctcctaggtttttttgttattccaga
tgaatttgccaattgcccttttctaatatcgttgaagaattgagttggaa
ttttgatggcgattgcatttgaatcttgtagattgctttttggggaagat
agaacattttttactagttttaactacaacgaacacacaggt

gaattctcacctgaggaataccgaatggcagagaagcacctcaaaaaatg
ttcaacatccttaatcatcagatcaaaacaaccctgagattccacctcac
accagtcagaatggctaagatcaaaaattcaggtgacagcagatgctggc
gaggatgtggagaaagaggaacactcctccattgttggtgggattgcagg
cttgtacaaccactctggaaatcagtctggcggttcctcaggaaattgga
catagtactaccggaggatccagcaatacctctcctgggcatatatccag
aagatgccccaactgagtttcttttttataattttacattaaatagaaat
ataggcaggtttcatagagtccttttcttatgctgttgatagctctctga
aatagttctatttttttaatattatggctctgaaacctgaggaaatggct
gagttcttaaaggcagcttttctagcagacacaggttagtactctctctc
ctacatggtgcttcacagttgtttgcaaatcgttccaggggcaccaattc
tcttttctgggtgccaggcatgcacatggttcacaataatgctttacagg
cagaacactagtacatgtaacataaatgaataattactattatgaagcct
tcccttgcaacagaagctttaagagttcttggaagaaaatctgtcctttc
aaagacatgacactgaggggtttgaaatacctgtggaatcgaatttcctc
gaaagctatcaatgatgataaataagcgtctctgaagcaaggtatgatcc
tgctccaggcttttctgggagagaatgtgtgctaaagtgtctgaatttca
aaaattcctctgaaaattaagtggaaagggagctgtgttgccagcccagt
cataattagattttacggtaagatctatggcaaacatttacctagaccaa
ggcttagaatgcaagacgattcttcttaaagacatatatttttatacacg
gtgagtatactgtcactgtccttcagacacaccagaaggagggcatggca
tctcatacagatgaattgtgagcctcccatgtggtgctgagaattgactc
agaaatccactgggaagagcgggcagtgctcattacttcgagccatcttc
accagtatgcagaccttcttaagataggtttttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64288490_64289675
seq2: B6Ng01-259B18.g_70_1254

seq1  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTCAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTCAAAAAATG  50

seq1  TTCAACATCCTTAATCATCAGATCAAAACAACCCTGAGATTCCACCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAATCATCAGATCAAAACAACCCTGAGATTCCACCTCAC  100

seq1  ACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGC  150

seq1  GAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGG  200

seq1  CTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGGAAATTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGGAAATTGGA  250

seq1  CATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAG  300

seq1  AAGATGCCCCAACTGAGTTTCTTTTTTATAATTTTACATTAAATAGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCCCCAACTGAGTTTCTTTTTTATAATTTTACATTAAATAGAAAT  350

seq1  ATAGGCAGGTTTCATAGAGTCCTTTTCTTATGCTGTTGATAGCTCTCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCAGGTTTCATAGAGTCCTTTTCTTATGCTGTTGATAGCTCTCTGA  400

seq1  AATAGTTCTATTTTTTTAATATTATGGCTCTGAAACCTGAGGAAATGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTCTATTTTTTTAATATTATGGCTCTGAAACCTGAGGAAATGGCT  450

seq1  GAGTTCTTAAAGGCAGCTTTTCTAGCAGACACAGGTTAGTACTCTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTTAAAGGCAGCTTTTCTAGCAGACACAGGTTAGTACTCTCTCTC  500

seq1  CTACATGGTGCTTCACAGTTGTTTGCAAATCGTTCCAGGGGCACCAATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGGTGCTTCACAGTTGTTTGCAAATCGTTCCAGGGGCACCAATTC  550

seq1  TCTTTTCTGGGTGCCAGGCATGCACATGGTTCACAATAATGCTTTACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTGGGTGCCAGGCATGCACATGGTTCACAATAATGCTTTACAGG  600

seq1  CAGAACACTAGTACATGTAACATAAATGAATAATTACTATTATGAAGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACACTAGTACATGTAACATAAATGAATAATTACTATTATGAAGCCT  650

seq1  TCCCTTGCAACAGAAGCTTTAAGAGTTCTTGGAAGAAAATCTGTCCTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGCAACAGAAGCTTTAAGAGTTCTTGGAAGAAAATCTGTCCTTTC  700

seq1  AAAGACATGACACTGAGGGGTTTGAAATACCTGTGGAATCGAATTTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACATGACACTGAGGGGTTTGAAATACCTGTGGAATCGAATTTCCTC  750

seq1  GAAAGCTATCAATGATGATAAATAAGCGTCTCTGAAGCAAGGTATGATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTATCAATGATGATAAATAAGCGTCTCTGAAGCAAGGTATGATCC  800

seq1  TGCTCCAGGCTTTTCTGGGAGAGAATGTGTGCTAAAGTGTCTGAATTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCAGGCTTTTCTGGGAGAGAATGTGTGCTAAAGTGTCTGAATTTCA  850

seq1  AAAATTCCTCTGAAAATTAAGTGGAAAGGGAGCTGTGTTGCCAGCCCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCCTCTGAAAATTAAGTGGAAAGGGAGCTGTGTTGCCAGCCCAGT  900

seq1  CATAATTAGATTTTACGGTAAAGATCTATGGCAAACATTTACCTAGACCA  950
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CATAATTAGATTTTACGGT-AAGATCTATGGCAAACATTTACCTAGACCA  949

seq1  AGGCTTAGAATGCAAGACGATTCTTCTTAAAGACATATA-TTTTATACAC  999
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGGCTTAGAATGCAAGACGATTCTTCTTAAAGACATATATTTTTATACAC  999

seq1  -GTGAGTATACTGTCACTGT-CTTCAGACACACCAGAA-GAGGGCATGGC  1046
       ||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  GGTGAGTATACTGTCACTGTCCTTCAGACACACCAGAAGGAGGGCATGGC  1049

seq1  ATCTCATTACAGATG-ATTGTGAG-CTCCCATGTGGTTGCTGAGAATTGA  1094
      |||||| |||||||| |||||||| ||||||||||| |||||||||||| 
seq2  ATCTCA-TACAGATGAATTGTGAGCCTCCCATGTGG-TGCTGAGAATTG-  1096

seq1  ACTCAGAA--TCACT-GGAAGAGCGGGCAGTGCTCATAACCTCCGAGCCA  1141
      ||||||||   |||| ||||||||||||||||||||| | || |||||||
seq2  ACTCAGAAATCCACTGGGAAGAGCGGGCAGTGCTCATTA-CTTCGAGCCA  1145

seq1  TCTTTCCCACCCCAGTATGCAAGACTTCTTAAAAATAGTTTTTAA  1186
      ||||     | ||||||||||   |||||||| |   ||||||||
seq2  TCTT-----CACCAGTATGCAGACCTTCTTAAGATAGGTTTTTAA  1185


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