BAC Information

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BAC

Clone NameB6Ng01-260M03
Chromosome3 (Build37)
Map Location 149,962,593 - 149,963,715
singlet/doubletsinglet
Overlap genenone
Upstream geneEG381483, LOC100040620, LOC100040633
Downstream geneLOC100040455, LOC100040463, LOC623554
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260M03.bB6Ng01-260M03.g
ACCGA065601GA065602
length1,2231,116
definitionB6Ng01-260M03.b B6Ng01-260M03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtacccctatttaaaatagggttatttggtt
ttctggagtccaacttcctcagttctttattatattgcatattagctccc
tattggatttatgattggtaaagatcttttcccaatctgttagttgctgt
gctgtcttattgactgtgtcttttgccttacagaaacttcaattttatga
ggtcccatttttcgattcttaatcttacagcacaagccattgttgttctg
ttaagaaattattcccctgtgcccataccttcgaggttcttccccacttt
ctcctttataagtttcagtgtctctggttttatgtggagatctttgaacc
acttagaactgatctttgtacaactcgataagaatgtatcaattccaatt
cttctacatgctatcctctagttgagccagcaccatttgttgaaaatgct
gtcttctttccactggatggttttagctcctctgtcaaagatcaatgagc
atagctgtttgggttcatttctgagtatttgattctattccattgatcta
cctgtctgtcattgtaccatgcaggttgttgttttttgtttgtttgtttt
gttatgtttttgttttttttgtttgtctattttttattttttgtttttat
cgcaattgttctgtagtacagcttgaggttagacatggtgattctactag
aggtttttttattgttgagaatagtttttgctatcctaggttttttgtta
ttccaatgaatttgtaaattgctttttctaactctgtgaagaattgagtt
ggaaatttgatagggattgcattgaatctgtagattgctttaggcaagat
agtcaattttattacctgccagtccatgagatgggagatctttccatctt
ctgaaatccttttcgatttctttcttcagagacttgaagtttttatcata
cagatctttgacttccttagttagagtacacccaaaatctttccatatat
ttgtaacttattttgaagaatgttggtttcctaatttctacctcagctgt
tttttcctttgttgtagagaaaagggccactgattgtttgaagttattta
tatatccagctactcactggagtggtttatcaggttagaagttcctaatg
attcggcaagtcataaatatgactacctgcaaggaattgaacttcttcga
ttagatcttctagctcccagtct
gaattcatctggatcagtactgagttctaattttactaagtgattagtaa
aaatttatcttccataattttctattctctgtttttaaagattcaaaagt
tggcaataatggagggagcatgattgcctgtttattttagtttatctcta
agcacaaccatgaatttcattcctgccttcagctacccacaaggaaaatt
tgaaaacattataaagaaatccagggatcatattatgccattaattttca
attcagataatactactgtaaggcacagcaaagaatgatagcttttataa
tatgcatatataaacatgtatgcctaaaacacacaccacacacacacaca
cacatattcatcagatagaaatacttcatttaaacaaaaattatattatc
ttccttgttgatatatcaaatcaaagaaatcctttttgggtatgtgtcta
aatgcatgtgtggttctggtacatatgcactctataattattatgcaata
aaaattaatatgaattataacattttgtacaattataacattaaataagt
taatacatatgttgtatatgctaccagctgcaagcaagctacagagttgt
aatatagcatacattataaaatttgtaatgtaataaaatagtatatgtag
ctatgagccttgtggggtgagaactaagttactgtagagtattctatttt
ttttctcataaataatcatagaataccagcacaatatattgtgaaatata
tatgtatatgcacatatatgtttgtggaagtgtctgtgttgtatttgttt
atatgtgatatatatgtagttcaggttgcatattccagaatttcaattat
gatacacatcattctaagaatcagcagcatatcagtgaaccaaatatata
aatcttttcttttatgttttacatcaatcaagttggcatcaagcaaacag
gatgttattatgaatgcgtgtattataaacatagtacccaaacttttaaa
catggtaaaactagaaactgcagtatacaaatgattgtagcaagagaaaa
tgattctgatgtacagtggatgatcttcttttttttgtcattcattggta
ttttatgattataata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_149962593_149963715
seq2: B6Ng01-260M03.g_68_1183 (reverse)

seq1  TATTATAATCATAAAATATACAAATG-ATGAC--AAAAAAGAAGATACCA  47
      |||||||||||||||  |||| |||| |||||  ||||||||||||  ||
seq2  TATTATAATCATAAA--ATACCAATGAATGACAAAAAAAAGAAGAT--CA  46

seq1  TCCCACTTGTACATCAGAATCATTTTCTCTTTGCTCCAATCCATTTGTAT  97
      | |||| |||||||||||||||||||||| ||||| |||| |||||||||
seq2  T-CCAC-TGTACATCAGAATCATTTTCTC-TTGCTACAAT-CATTTGTAT  92

seq1  ACTTGCAGTTTTCTAGTTTTTACCATGTTT-AAAGTTTGGGTACTATGTT  146
      || ||||| ||||||| ||||||||||||| |||||||||||||||||||
seq2  AC-TGCAG-TTTCTAG-TTTTACCATGTTTAAAAGTTTGGGTACTATGTT  139

seq1  TATAATACACGCATTCATAAT-ACATCCTGTTTGCTTGATGCCAACTTTG  195
      ||||||||||||||||||||| |||||||||||||||||||||||| |||
seq2  TATAATACACGCATTCATAATAACATCCTGTTTGCTTGATGCCAAC-TTG  188

seq1  ATTTGATGTAAAACATAAAAGAAAAGATTTATATATTTGGTTCACTGATA  245
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTGATGTAAAACATAAAAGAAAAGATTTATATATTTGGTTCACTGATA  237

seq1  TGCTGCTGATTCTTAGAATGATGTGTATCATAATTGAAATTCTGGAATAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGATTCTTAGAATGATGTGTATCATAATTGAAATTCTGGAATAT  287

seq1  GCAACCTGAACTACATATATATCACATATAAACAAATACAACACAGACAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTGAACTACATATATATCACATATAAACAAATACAACACAGACAC  337

seq1  TTCCACAAACATATATGTGCATATACATATATATTTCACAATATATTGTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAAACATATATGTGCATATACATATATATTTCACAATATATTGTG  387

seq1  CTGGTATTCTATGATTATTTATGAG-AAAAAAATAGAATACTCTACAGTA  444
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTGGTATTCTATGATTATTTATGAGAAAAAAAATAGAATACTCTACAGTA  437

seq1  ACTTAGTTCTCACCCCACAAGGCTCATAGCTACATATACTATTTTATTAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTTCTCACCCCACAAGGCTCATAGCTACATATACTATTTTATTAC  487

seq1  ATTACAAATTTTATAATGTATGCTATATTACAACTCTGTAGCTTGCTTGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAATTTTATAATGTATGCTATATTACAACTCTGTAGCTTGCTTGC  537

seq1  AGCTGGTAGCATATACAACATATGTATTAACTTATTTAATGTTATAATTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTAGCATATACAACATATGTATTAACTTATTTAATGTTATAATTG  587

seq1  TACAAAATGTTATAATTCATATTAATTTTTATTGCATAATAATTATAGAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAATGTTATAATTCATATTAATTTTTATTGCATAATAATTATAGAG  637

seq1  TGCATATGTACCAGAACCACACATGCATTTAGACACATACCCAAAAAGGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATGTACCAGAACCACACATGCATTTAGACACATACCCAAAAAGGA  687

seq1  TTTCTTTGATTTGATATATCAACAAGGAAGATAATATAATTTTTGTTTAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGATTTGATATATCAACAAGGAAGATAATATAATTTTTGTTTAA  737

seq1  ATGAAGTATTTCTATCTGATGAATATGTGTGTGTGTGTGTGTGGTGTGTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTATTTCTATCTGATGAATATGTGTGTGTGTGTGTGTGGTGTGTG  787

seq1  TTTTAGGCATACATGTTTATATATGCATATTATAAAAGCTATCATTCTTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGCATACATGTTTATATATGCATATTATAAAAGCTATCATTCTTT  837

seq1  GCTGTGCCTTACAGTAGTATTATCTGAATTGAAAATTAATGGCATAATAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCCTTACAGTAGTATTATCTGAATTGAAAATTAATGGCATAATAT  887

seq1  GATCCCTGGATTTCTTTATAATGTTTTCAAATTTTCCTTGTGGGTAGCTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTGGATTTCTTTATAATGTTTTCAAATTTTCCTTGTGGGTAGCTG  937

seq1  AAGGCAGGAATGAAATTCATGGTTGTGCTTAGAGATAAACTAAAATAAAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGAATGAAATTCATGGTTGTGCTTAGAGATAAACTAAAATAAAC  987

seq1  AGGCAATCATGCTCCCTCCATTATTGCCAACTTTTGAATCTTTAAAAACA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATCATGCTCCCTCCATTATTGCCAACTTTTGAATCTTTAAAAACA  1037

seq1  GAGAATAGAAAATTATGGAAGATAAATTTTTACTAATCACTTAGTAAAAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATAGAAAATTATGGAAGATAAATTTTTACTAATCACTTAGTAAAAT  1087

seq1  TAGAACTCAGTACTGATCCAGATGAATTC  1123
      |||||||||||||||||||||||||||||
seq2  TAGAACTCAGTACTGATCCAGATGAATTC  1116