BAC Information

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BAC

Clone NameB6Ng01-260P12
Chromosome3 (Build37)
Map Location 76,233,766 - 76,234,592
singlet/doubletsinglet
Overlap geneFstl5
Upstream geneWdr49, Pdcd10, Serpini1, Golph4
Downstream geneLOC100041625, LOC100041635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260P12.bB6Ng01-260P12.g
ACCGA065756GA065757
length827966
definitionB6Ng01-260P12.b B6Ng01-260P12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacagagcatttcgtgagtgcagattcaatctttatctcatttt
gctcttttcttttcctgatgctttatacaatatggcttgcaggctttatc
ctaagtacaagctgtttcataaaaaaacgtgttataacagagagaattta
aggttttggctcttccagtatatagatgaatccaggcaattgtgcatttg
agaaaaaaactctgtagacatgctctcttctgtagggtatcccatgtttt
gttgactttggtgtgagagccagtttacaatgttgccttagaggctcctc
tagagggaaaacactgacctgctgtcatcacacctcaggaacaatttaat
tacttgtgcagtgacatttacaactttattacaaaagcaaaaataaatta
acagatgaggttactgtacattccaggaactatgacacgttaagactttt
tcttccattggaataaaacattatattcatgctaaggagttgtaaaacaa
tttatttttgtttaaaagtaccatttaaaagtaccttagaataacaaact
ctgctttccttataaaacaaaatatgaagatttagtcaatataatactta
aaaagaacagactacaaaaccacagctaaaacaatgaaataatcaagatc
tgtgctcaagagaaaaacaaaagaaacagagaaacaaatgtggctactta
caaagcagtaacaatccatatcatgtcctcaactgggcacatgaaaacaa
agcttaagacagcttgattacagatagacaggtagcctttgcatatgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtg

gaattctcacctgaggaataccgaatggcagaaaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgccgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacgtggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaactagtcattttgtttaactcttagtgcataggga
agagatcttatctatgttaaagggtggccctggctagcttcacgtccact
tgacacaaagctagaggtgtatgaaaaaagaataacaattgagaaaatgc
ctccttacaatccagctgcaggccattttgttaattaacaattaattggg
agaaggtacagcccactgtgagtgctgctatctctgggctatagttccat
aagaaattaacctggtaggccagggcaagaaagccagtagtaggcagcac
tactccatgggcctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76233766_76234592
seq2: B6Ng01-260P12.b_48_874

seq1  GAATTCTACAGAGCATTTCGTGAGTGCAGATTCAATCTTTATCTCATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGAGCATTTCGTGAGTGCAGATTCAATCTTTATCTCATTTT  50

seq1  GCTCTTTTCTTTTCCTGATGCTTTATACAATATGGCTTGCAGGCTTTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTTCTTTTCCTGATGCTTTATACAATATGGCTTGCAGGCTTTATC  100

seq1  CTAAGTACAAGCTGTTTCATAAAAAAACGTGTTATAACAGAGAGAATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTACAAGCTGTTTCATAAAAAAACGTGTTATAACAGAGAGAATTTA  150

seq1  AGGTTTTGGCTCTTCCAGTATATAGATGAATCCAGGCAATTGTGCATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTGGCTCTTCCAGTATATAGATGAATCCAGGCAATTGTGCATTTG  200

seq1  AGAAAAAAACTCTGTAGACATGCTCTCTTCTGTAGGGTATCCCATGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAACTCTGTAGACATGCTCTCTTCTGTAGGGTATCCCATGTTTT  250

seq1  GTTGACTTTGGTGTGAGAGCCAGTTTACAATGTTGCCTTAGAGGCTCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTTTGGTGTGAGAGCCAGTTTACAATGTTGCCTTAGAGGCTCCTC  300

seq1  TAGAGGGAAAACACTGACCTGCTGTCATCACACCTCAGGAACAATTTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGAAAACACTGACCTGCTGTCATCACACCTCAGGAACAATTTAAT  350

seq1  TACTTGTGCAGTGACATTTACAACTTTATTACAAAAGCAAAAATAAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTGCAGTGACATTTACAACTTTATTACAAAAGCAAAAATAAATTA  400

seq1  ACAGATGAGGTTACTGTACATTCCAGGAACTATGACACGTTAAGACTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGAGGTTACTGTACATTCCAGGAACTATGACACGTTAAGACTTTT  450

seq1  TCTTCCATTGGAATAAAACATTATATTCATGCTAAGGAGTTGTAAAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCATTGGAATAAAACATTATATTCATGCTAAGGAGTTGTAAAACAA  500

seq1  TTTATTTTTGTTTAAAAGTACCATTTAAAAGTACCTTAGAATAACAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTGTTTAAAAGTACCATTTAAAAGTACCTTAGAATAACAAACT  550

seq1  CTGCTTTCCTTATAAAACAAAATATGAAGATTTAGTCAATATAATACTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTCCTTATAAAACAAAATATGAAGATTTAGTCAATATAATACTTA  600

seq1  AAAAGAACAGACTACAAAACCACAGCTAAAACAATGAAATAATCAAGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACAGACTACAAAACCACAGCTAAAACAATGAAATAATCAAGATC  650

seq1  TGTGCTCAAGAGAAAAACAAAAGAAACAGAGAAACAAATGTGGCTACTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCAAGAGAAAAACAAAAGAAACAGAGAAACAAATGTGGCTACTTA  700

seq1  CAAAGCAGTAACAATCCATATCATGTCCTCAACTGGGCACATGAAAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAGTAACAATCCATATCATGTCCTCAACTGGGCACATGAAAACAA  750

seq1  AGCTTAAGACAGCTTGATTACAGATAGACAGGTAGCCTTTGCATATGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAAGACAGCTTGATTACAGATAGACAGGTAGCCTTTGCATATGTGT  800

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTG  827
      |||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTG  827


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