BAC Information

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BAC

Clone NameB6Ng01-261G02
Chromosome3 (Build37)
Map Location 84,828,873 - 84,829,684
singlet/doubletsinglet
Overlap genenone
Upstream geneD930015E06Rik, Mnd1, Trim2, EG624713, 6330505N24Rik, Arfip1, EG667788, EG627369, Tigd4, Tmem154, LOC624889, Fbxw7, Dear1
Downstream geneLOC100042237, LOC100042125, Pet112l, 9930021J17Rik, Glt28d2, LOC100042265, Gm1019
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261G02.bB6Ng01-261G02.g
ACCGA066064GA066065
length1,187818
definitionB6Ng01-261G02.b B6Ng01-261G02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttaactctgagcccccttttttaatggggttatttgatc
ttctggagtctaccttcttgaattctttatatatattggatattagtccc
ctatctgatttagaattggtaaagatcttttcccaatctattggtggcct
ttttgtcttactgacagtgtcttttgccttacagaagctttgcaatttta
tgaggtcccatttgtcgattctcaatcttacagcacaagccattgctgtt
ctattcaggaattgttcccctgtgcccatatcttcgaggcttttccccac
tttctcctctataagtttcactgtctctggttttatgtggagttctttga
tccacttaaatttgaccttagttcaaggagataggaatgaatcaatttgc
attcttctacatgataaccaccagttgtgccagcaccacttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
actacttgtctgttgctataccagtaccatgcagttttttttttcttttt
tttatcacaattgctctgtagtaaagtttaggtcaggcatggtgattcca
ccagaggttcttttatcattgagaagagtttttgttatcctagttttttt
gttattccagatgaatttgcaaattgcactttctaattcattgaagaatt
gagttggaattttgagggggattgcattgaacctgcagattgcttttggc
aagatagccattttttactatattgatcctgccaatccatgagcatggga
gatctttccatcttctgagatcttctttaatttctttccttcagagtctt
gaagtcttatcatacagattctttcacttccttagttagagtcacgccaa
gatatttttatattattttgtgacttattgagaagtgtgttgttccccta
atttcttttctcagcctgtttattcttgtgtagagaaaggccattgacct
ggtttgagttaattttaattcaagcctactttcacagagcctgtttacag
ggtttaggagttccttgcggtactttgtgtcaatatgttaccatcaatca
tctgcctaagcgtatatttggaatcattctttgcgct
gaattctagggagggacaaggaggcagggatgtgggtttaggaacactgt
gtcaggcagaagacacaagaccttgagaattggaagggattgtctgatgt
gaggatttgggagccagctagtatcccctgaatgatctcatctagagccc
tggccagtcctgttttggggtgctgtgcacctgcagggtgtgaggactct
ccagctgccctcagagctgcccagcaggtttacagaataacaacgggcca
acgtggagaatgcttgcatattatttgcatacaatttgcacatgaatagc
ctacactatctgttcccaggaaatttcaagttaaatattaattgttactg
ccctcaggagtttttattttttgattttgctttctctgtttcttctcacc
cacttgctgtcagtgactcagatccctgtatggaaggggaggaggaggag
gacgcccccgccaggctggagaagggcagctgaggaccagaaactgggga
cttagggagtgggtggctggtgtaactctgccaactgagaggctgggtat
acagggaagacacacggaggtgccattggcaggtgctgaggagtctgcta
cacagaaaagacaggtaaagataccatccatcccaggatagcctgaggca
ctttccagtcagcacccaatggatgccatggttaagtgattgctctgctc
ctcagcctggcaccctgcctgtcccgctggcttctcaggttcccatgctc
cccatcattgtcacctaaagccagtaccagtaggttctttgaagggcgga
catgtgttttaagaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_84828873_84829684
seq2: B6Ng01-261G02.g_68_885

seq1  GAATTCTAGGGAGGGACAAGGAGGCAGGGATGTGGGTTTAGGAACACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGGAGGGACAAGGAGGCAGGGATGTGGGTTTAGGAACACTGT  50

seq1  GTCAGGCAGAAGACACAAGACCTTGAGAATTGGAAGGGATTGTCTGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCAGAAGACACAAGACCTTGAGAATTGGAAGGGATTGTCTGATGT  100

seq1  GAGGATTTGGGAGCCAGCTAGTATCCCCTGAATGATCTCATCTAGAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTTGGGAGCCAGCTAGTATCCCCTGAATGATCTCATCTAGAGCCC  150

seq1  TGGCCAGTCCTGTTTTGGGGTGCTGTGCACCTGCAGGGTGTGAGGACTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGTCCTGTTTTGGGGTGCTGTGCACCTGCAGGGTGTGAGGACTCT  200

seq1  CCAGCTGCCCTCAGAGCTGCCCAGCAGGTTTACAGAATAACAACGGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGCCCTCAGAGCTGCCCAGCAGGTTTACAGAATAACAACGGGCCA  250

seq1  ACGTGGAGAATGCTTGCATATTATTTGCATACAATTTGCACATGAATAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGAGAATGCTTGCATATTATTTGCATACAATTTGCACATGAATAGC  300

seq1  CTACACTATCTGTTCCCAGGAAATTTCAAGTTAAATATTAATTGTTACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTATCTGTTCCCAGGAAATTTCAAGTTAAATATTAATTGTTACTG  350

seq1  CCCTCAGGAGTTTTTATTTTTTGATTTTGCTTTCTCTGTTTCTTCTCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGGAGTTTTTATTTTTTGATTTTGCTTTCTCTGTTTCTTCTCACC  400

seq1  CACTTGCTGTCAGTGACTCAGATCCCTGTATGGAAGGGGAGGAGGAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCTGTCAGTGACTCAGATCCCTGTATGGAAGGGGAGGAGGAGGAG  450

seq1  GACGCCCCCGCCAGGCTGGAGAAGGGCAGCTGAGGACCAGAAACTGGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCCCCCGCCAGGCTGGAGAAGGGCAGCTGAGGACCAGAAACTGGGGA  500

seq1  CTTAGGGAGTGGGTGGCTGGTGTAACTCTGCCAACTGAGAGGCTGGGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGGAGTGGGTGGCTGGTGTAACTCTGCCAACTGAGAGGCTGGGTAT  550

seq1  ACAGGGAAGACACACGGAGGTGCCATTGGCAGGTGCTGAGGAGTCTGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAAGACACACGGAGGTGCCATTGGCAGGTGCTGAGGAGTCTGCTA  600

seq1  CACAG-AAAGACAGGTAAAGAAACCAGCCAT-CCAGGATAGCCTGAGGCA  648
      ||||| ||||||||||||||| |||| |||| ||||||||||||||||||
seq2  CACAGAAAAGACAGGTAAAGATACCATCCATCCCAGGATAGCCTGAGGCA  650

seq1  C-TTCCAGTCAGCACCCAATGGATGCCATGGTTAAGTGATTGCTCTGCTC  697
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGTCAGCACCCAATGGATGCCATGGTTAAGTGATTGCTCTGCTC  700

seq1  CTCAGCCTGGCACCCTGCCTGTCCCGCTGGCTTCTCAGGTTCCCATGCT-  746
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTCAGCCTGGCACCCTGCCTGTCCCGCTGGCTTCTCAGGTTCCCATGCTC  750

seq1  CCCATCATTGTCACCAGAAGCCAGAACCAGGAGGTTC-ATGAAGGCAGGA  795
      |||||||||||||||  ||||||| ||||| ||||||  ||||||  |||
seq2  CCCATCATTGTCACCTAAAGCCAGTACCAGTAGGTTCTTTGAAGGGCGGA  800

seq1  CAAGTG-TTTAAGAATGG  812
      || ||| |||||||||||
seq2  CATGTGTTTTAAGAATGG  818