BAC Information

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BAC

Clone NameB6Ng01-263G10
Chromosome3 (Build37)
Map Location 3,306,306 - 3,307,325
singlet/doubletsinglet
Overlap geneLOC667655
Upstream genenone
Downstream geneLOC100039140, Hnf4g, EG383815, LOC100039157, LOC100039167, LOC667709
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263G10.bB6Ng01-263G10.g
ACCGA067580GA067581
length1,1681,099
definitionB6Ng01-263G10.b B6Ng01-263G10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttgatg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacgggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacacagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaatacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagtttcagagacaaagtttggagctgagatga
aaggatggtccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgcgactatgcccggggcctagcaaa
cacagaagtatgctcacagtcagctaatggatcgatcacagggctcccaa
tggaggagctagagaaagtactcatggagctaaagggatctgcaccctat
agtggatcacattatgactaaccagtacccagagctgttgactctagctg
catatgtattcaaaagatggctagtctcatcactggaaagaagaagccca
tggacatgcaaactttattatgcccagttacaagggaatgccaggccaaa
aagggggaagatgtcctg

gaattccacacccctaagccctttaccccataaaaacccctagctttcaa
gtctcagggtcaaatccactgtctcctgcgtgagatatgtttcaacctgg
agctctgccattaaactgcctcatgtgcttacagcaagaaggattctcgt
gtttctttgggtgctctcgctccggagactagagtgtgggtccccgaaag
ggggtcttacacaccttttctagttcactctgaactctggctggctagtt
caactcagctgttctggctcaaactcctctccaagctgactgattcaacc
tatcttctcttgggttctgactgaactgatctgcttggcctcaaactaac
cttcggcaatctgttctaatcttctggttcctccttctctggccagttct
cacctacaacctgtctctgtaaaattgtcctggtaatctcaatctcactc
cttcttctctctttccctctccctctcctcactctccctctcccctctct
ccctccctcttctccttctccttctcctcctcctctcccccctctctccc
tccctcccccctccactgttcttttaagtcacccctcttcctgtctgttc
tcaggagagtttggagtatcctgtcttgttgtgcctgttcttgagcccca
aaagatcgcccaggagccgactctgatgcaattgcactagggtctcttta
ttacaagcagaagcttgggcttgctcagtgctgaccctgatgcagcagaa
cggtttagtgaagccccaaaccctcatcatgacaaggttttataggaaat
gatgagcaagcaaggggatgtccagcctggcaggcttctcattgaaatga
ctattgtaagccctcatgaagcaaaaccatgaattattcacaaacgggtc
ttgaaagtacatctgaaacagtcagactttttctttgactggctgttgct
taggaaagtagctaggactaactctgggggtatgagcttgaggacaagcc
atggcacttaggtgctacttggtttcagctgccagggttttttttttttt
tttttagaatggaattccagttctaaggatgggagtagatttgggctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_3306306_3307325
seq2: B6Ng01-263G10.g_131_1164

seq1  CCACTGTCTCCTGCGTGAGATATGTTTCAACCTGGAGCTCTGCCATTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTCTCCTGCGTGAGATATGTTTCAACCTGGAGCTCTGCCATTAAA  50

seq1  CTGCCTCATGTGCTTACAGCAAGAAGGATTCTCGTGTTTCTTTGGGTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCATGTGCTTACAGCAAGAAGGATTCTCGTGTTTCTTTGGGTGCT  100

seq1  CTCGCTCCGGAGACTAGAGTGTGGGTCCCCGAAAGGGGGTCTTACACACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTCCGGAGACTAGAGTGTGGGTCCCCGAAAGGGGGTCTTACACACC  150

seq1  TTTTCTAGTTCACTCTGAACTCTGGCTGGCTAGTTCAACTCAGCTGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAGTTCACTCTGAACTCTGGCTGGCTAGTTCAACTCAGCTGTTCT  200

seq1  GGCTCAAACTCCTCTCCAAGCTGACTGATTCAACCTATCTTCTCTTGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAAACTCCTCTCCAAGCTGACTGATTCAACCTATCTTCTCTTGGGT  250

seq1  TCTGACTGAACTGATCTGCTTGGCCTCAAACTAACCTTCGGCAATCTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGAACTGATCTGCTTGGCCTCAAACTAACCTTCGGCAATCTGTT  300

seq1  CTAATCTTCTGGTTCCTCCTTCTCTGGCCAGTTCTCACCTACAACCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCTTCTGGTTCCTCCTTCTCTGGCCAGTTCTCACCTACAACCTGTC  350

seq1  TCTGTAAAATTGTCCTGGTAATCTCAATCTCACTCCTTCTTCTCTCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAAATTGTCCTGGTAATCTCAATCTCACTCCTTCTTCTCTCTTTC  400

seq1  CCTCTCCCTCTCCTCTCTCTCCCTCTCCCCTCTCTCCCTCCCTCTTCTCC  450
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCTCTCCTCACTCTCCCTCTCCCCTCTCTCCCTCCCTCTTCTCC  450

seq1  TTCTCCTTCTCCTCCTCCTCTCCCCCCTCTCTCCCTCCCTCCCCCCTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTCTCCTCCTCCTCTCCCCCCTCTCTCCCTCCCTCCCCCCTCCA  500

seq1  CTGTTCTTTTAAGTCACCCCTCTTCCTGTCTGTTCTCAGGAGAGTTTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTTTTAAGTCACCCCTCTTCCTGTCTGTTCTCAGGAGAGTTTGGA  550

seq1  GTATCCTGTCTTGTTGTGCCTGTTCTTGAGCCCCAAAAGATCGCCCAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCTGTCTTGTTGTGCCTGTTCTTGAGCCCCAAAAGATCGCCCAGGA  600

seq1  GCCGACTCTGATGCAATTGCACTAGGGTCTCTTTATTACAAGCAGAAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGACTCTGATGCAATTGCACTAGGGTCTCTTTATTACAAGCAGAAGCT  650

seq1  TGGGCTTGCTCAGTGCTGACCCTGATGCAGCAGAACGGTTTAGTGAAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTGCTCAGTGCTGACCCTGATGCAGCAGAACGGTTTAGTGAAGCC  700

seq1  CCAAACCCTCATCATGACAAGGTTTTATAGGAAATGATGAGCAAGCAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCCTCATCATGACAAGGTTTTATAGGAAATGATGAGCAAGCAAGG  750

seq1  GGATGTCCAGCCTGGCAGGCTTCTCATTG-AATGACTATTGTAAGCCCTC  799
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGATGTCCAGCCTGGCAGGCTTCTCATTGAAATGACTATTGTAAGCCCTC  800

seq1  ATGAAGCAAAACCATGAA-TAATCACAAAC-GGTC-TGAAAGTACATCTG  846
      |||||||||||||||||| || |||||||| |||| ||||||||||||||
seq2  ATGAAGCAAAACCATGAATTATTCACAAACGGGTCTTGAAAGTACATCTG  850

seq1  AAACAGTCAGACTTTT--CTTGACTGGCTGTTGC-TAGG-AAGTAGCTAG  892
      ||||||||||||||||   ||||||||||||||| |||| ||||||||| 
seq2  AAACAGTCAGACTTTTTCTTTGACTGGCTGTTGCTTAGGAAAGTAGCTA-  899

seq1  GGACTAACTCT-GGGGTATGAGC-TGAGGACAAGCCATGGCACTTAGGTG  940
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  GGACTAACTCTGGGGGTATGAGCTTGAGGACAAGCCATGGCACTTAGGTG  949

seq1  CTACTTGGGTTCAGCTG-CAGGGTTTTTTTTTTTTTTTTTTAG-ATGG-A  987
      |||||||| |||||||| ||||||||||||||||||||||||| |||| |
seq2  CTACTTGGTTTCAGCTGCCAGGGTTTTTTTTTTTTTTTTTTAGAATGGAA  999

seq1  TTCCAGTTCTAA-GAT-GGAGTAGATTTGGCCTCT  1020
      |||||||||||| ||| ||||||||||||| ||||
seq2  TTCCAGTTCTAAGGATGGGAGTAGATTTGGGCTCT  1034


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