BAC Information

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BAC

Clone NameB6Ng01-265J14
Chromosome3 (Build37)
Map Location 122,275,855 - 122,276,989
singlet/doubletsinglet
Overlap genenone
Upstream geneA730020M07Rik, 4930432M17Rik, F3, Abcd3, LOC100043298, Arhgap29, Abca4, EG668788, LOC626807, LOC100043724, Gclm, Ppia-ps3_1245.1, Dnttip2, LOC675117, LOC100043726, Bcar3, Fnbp1l
Downstream genePpia-ps3_2252.1, Pde5a, LOC668792, Fabp2, 1810037I17Rik, Usp53, Myoz2, Synpo2, Sec24d, G430022H21Rik, Prss12, EG668804, Ndst3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265J14.bB6Ng01-265J14.g
ACCGA069207GA069208
length1,1891,116
definitionB6Ng01-265J14.b B6Ng01-265J14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctctaaaatgaggattaagataggatacccgctcttccttctct
tacttaataatttttgacatctgagcaattagacaagagaaaggtaatat
agggataaaaacagaaaaggcaaaagtcacactatccttatttacaaata
acacgatcctacacttgaaagactatagaatctaccagaaaagtatctac
atctgataaacactagaagacaaaaagactgtctcttggactggcagaat
tgatgtgaaaatgcctctactaccaaaactaatctataaatttaactcag
tatctttcaaaattctgatgtcacatttcacagattggggaagaactatc
caagaatttatatgaaaccacaaaagaccatgagcaatcccaagccaaag
gaatcccaaggagtgaatgagtagctggaagcatcgcaacatctcacctc
aaaaacactgtgaggccacagagatgaagatcgtctgctattggcataag
aacaaacagatggaccaagggataggatagaggacccagatataagctga
aaaaaacattctaacataatctttgacaataggaggcaaaaacatacatt
gggaaagcctcgtcaacaatggtagcaaaactggatatccacctgtaaaa
ggataaaattagattcatatctttaaccttgttcacaaattgatctgaaa
tggaccaaagaaactaacctacaaactaaaatgaagccaggtggtggtgg
tgcagtcctttaatcccagcacttgggaagcagaggcaggtggatctctg
agttccaggacagcctggtctatagtgagttccaggacagccagggctac
actgagaaagtctgactcaaaaaacaaaacacaacaaaataaataaacga
aaagcctaaaatgcagaactatgagacgaaaaataacagagaatgctctc
caaattactggagtagaaaagagcttctgactgattggcatgggatctag
cctccacatatatatcacagatgggtcaagtgaaattacattttctacac
agctagaaaactgcagcaggagccacccctacatcacagatggagaaaat
ctatatcagctatacttcagtcgagggggcctatatcatgatgagactga
gagccaagaatggacttgccaaattagaatgtgcgctca
gaattccagattgtgttaagctgacaactgaaattaaacatcaccatttt
ctcctcccctccccccgacacacacaatttttaagcaactgtacaggttc
aagcacattttattaaatattactgatctagactggcgaaatatagatgt
ttctgaacagtattacatgaagagattacatagctcttaaaacagctttt
tgtaaagaaaggctaaaatttccaattctctgactatttgtgtaaagagc
taaataaaaattaggaaactggaaagccctgaggggaattctaagtacaa
tgagcaaagagtaagaagcaagaaggaaattcatgaagaactctaagtgg
gctctatgtagatggcacaccaaaaatgaaccagacaatgtttggcacta
gggtagaaaggataaaaaggaacacagaaaacaaaacaaaacaaaacaaa
acaaaacaaaacaaaccctagtcatattaatgaccactaatactcttaac
cacggttaagcgccagaaacataaccaaaactcactgtagcacctagatt
aatttcacaattcacctaagtaccagcaaagatgctaagtgctaatcatt
atttcagggttagaggtgatggaagagtcctaactatcaacctagtagtt
atgcaaacctacagtcattctgaaagggaacccaaaaggggaagatatga
ggaagagatgacaaatctaggagttaattatataagcaaatccagagaaa
caaaaatagataagtagctgcccaaaccaggaaaaagaggaaattactgg
ggatgggtacaaagtttatttttgtgatgataaaaatgttctaaaattat
agggctctggagatggctgaatcctgaagtgtttgctgtgaagcatggag
accagaatttcatctcaagcacttaaagtaaacagtggcatgtggagcaa
ggcacacctgcaatccagtgctatggaggcagagaaacatatgagctgct
ggagccagcagtctgttagtcaatcagcagctactgcagattgtcagaga
tgtctaaaaatagatggtaggccctaggtctcaagcagagcagtctgttc
atacagtgagtcaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_122275855_122276989
seq2: B6Ng01-265J14.g_67_1182

seq1  GAATTCCAGATTGTGTTAAGCTGACAACTGAAATTAAACATCACCATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATTGTGTTAAGCTGACAACTGAAATTAAACATCACCATTTT  50

seq1  CTCCTCCCCTCCCCCCGACACACACAATTTTTAAGCAACTGTACAGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCCTCCCCCCGACACACACAATTTTTAAGCAACTGTACAGGTTC  100

seq1  AAGCACATTTTATTAAATATTACTGATCTAGACTGGCGAAATATAGATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACATTTTATTAAATATTACTGATCTAGACTGGCGAAATATAGATGT  150

seq1  TTCTGAACAGTATTACATGAAGAGATTACATAGCTCTTAAAACAGCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAACAGTATTACATGAAGAGATTACATAGCTCTTAAAACAGCTTTT  200

seq1  TGTAAAGAAAGGCTAAAATTTCCAATTCTCTGACTATTTGTGTAAAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGAAAGGCTAAAATTTCCAATTCTCTGACTATTTGTGTAAAGAGC  250

seq1  TAAATAAAAATTAGGAAACTGGAAAGCCCTGAGGGGAATTCTAAGTACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAAATTAGGAAACTGGAAAGCCCTGAGGGGAATTCTAAGTACAA  300

seq1  TGAGCAAAGAGTAAGAAGCAAGAAGGAAATTCATGAAGAACTCTAAGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAAGAGTAAGAAGCAAGAAGGAAATTCATGAAGAACTCTAAGTGG  350

seq1  GCTCTATGTAGATGGCACACCAAAAATGAACCAGACAATGTTTGGCACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTATGTAGATGGCACACCAAAAATGAACCAGACAATGTTTGGCACTA  400

seq1  GGGTAGAAAGGATAAAAAGGAACACAGAAAACAAAACAAAACAAAACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGAAAGGATAAAAAGGAACACAGAAAACAAAACAAAACAAAACAAA  450

seq1  ACAAAACAAAACAAACCCTAGTCATATTAATGACCACTAATACTCTTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAACCCTAGTCATATTAATGACCACTAATACTCTTAAC  500

seq1  CACGGTTAAGCGCCAGAAACATAACCAAAACTCACTGTAGCACCTAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTTAAGCGCCAGAAACATAACCAAAACTCACTGTAGCACCTAGATT  550

seq1  AATTTCACAATTCACCTAAGTACCAGCAAAGATGCTAAGTGCTAATCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCACAATTCACCTAAGTACCAGCAAAGATGCTAAGTGCTAATCATT  600

seq1  ATTTCAGGGTTAGAGGTGATGGAAGAGTCCTAACTATCAACCTAGTAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGGGTTAGAGGTGATGGAAGAGTCCTAACTATCAACCTAGTAGTT  650

seq1  ATGCAAACCTACAGTCATTCTGAAAGGGAACCCAAAAGGGGAAGATATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAACCTACAGTCATTCTGAAAGGGAACCCAAAAGGGGAAGATATGA  700

seq1  GGAAGAGATGACAAATCTAGGAGTTAATTATATAAGCAAATCCAGAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGATGACAAATCTAGGAGTTAATTATATAAGCAAATCCAGAGAAA  750

seq1  CAAAAATAGATAAGTAGCTGCCCAAACCAGGAAAAAGAGGAAATTACTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATAGATAAGTAGCTGCCCAAACCAGGAAAAAGAGGAAATTACTGG  800

seq1  GGATGGGTACAAAGTTTATTTTTGTGATGATAAAAATGTTCTAAAATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGTACAAAGTTTATTTTTGTGATGATAAAAATGTTCTAAAATTAT  850

seq1  AGGGCTCTGGAGATGGCTGAATCCTGAAGTGTTTGCTGTGAAGCATGGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCTGGAGATGGCTGAATCCTGAAGTGTTTGCTGTGAAGCATGGAG  900

seq1  ACCAGAATTTCATCTCAAGCACTT-AAGTAAACAGTGGCATGTGGAGCAA  949
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACCAGAATTTCATCTCAAGCACTTAAAGTAAACAGTGGCATGTGGAGCAA  950

seq1  GGCACACCTGCAATCCCAGTGCTATGGAGGCAGAGAAAACATATGAAGCT  999
      |||||||||||||| |||||||||||||||||||| ||||||||| ||||
seq2  GGCACACCTGCAAT-CCAGTGCTATGGAGGCAGAG-AAACATATG-AGCT  997

seq1  GCTGGAAGCCAGCCAGTCTGTTTAGTCAAATCAGCAAGCTTACTGCAAGA  1049
      ||||| |||||| ||||||| |||||| ||||||| ||| |||||| |||
seq2  GCTGG-AGCCAG-CAGTCTG-TTAGTC-AATCAGC-AGC-TACTGC-AGA  1040

seq1  TTTTGTCAGAGATGTCTTAAAAAATAAGATGGGAAGCCCTTAGGTCTCAG  1099
        |||||||||||||||  |||||| |||||| | |||| ||||||||| 
seq2  --TTGTCAGAGATGTCT--AAAAAT-AGATGGTAGGCCC-TAGGTCTCAA  1084

seq1  GCAGAGCCAGCCTG-TCATACACAGTGAGTTCCAGGC  1135
      |||||| ||| ||| ||||  |||||||||  |||||
seq2  GCAGAG-CAGTCTGTTCAT--ACAGTGAGT--CAGGC  1116