BAC Information

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BAC

Clone NameB6Ng01-266I02
Chromosome3 (Build37)
Map Location 158,132,677 - 158,133,181
singlet/doubletsinglet
Overlap geneLrrc7
Upstream geneZranb2, Ptger3, LOC433686, LOC624684, Cth, Ankrd13c, Sfrs11, Lrrc40
Downstream geneLOC100041008, LOC668905
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266I02.bB6Ng01-266I02.g
ACCGA069885GA069886
length1,124501
definitionB6Ng01-266I02.b B6Ng01-266I02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttt
tcaaatgctttcttcatgtctaaggagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacgttgacggatttcggtatattaaacc
atccctgcatccctggaataaaccctacttggtcaggttgaatgattttt
ttaatgtattcttggataaggttagtgagaattctattgagtatttttgc
atcgatattcataagggaaaatagtctgaagttctctatctttgttgaat
ctttctgtggttttggtatcagagtaattgtggcttcatataatgagttg
ggtagagtaccttctacttctattttgtggaatagtttgtgcagaactgg
aattagatcttctttgaaggtcttatagaactcggtactaaacccatctg
gtctgtggcttttttggttgggagactattaatgactgcttctatttctt
taggagatatgaaactgtttagattgttaacttgatcctgatttaacttt
ggtacctggtatctgtctaaatgttttgagttaggatctttttgcatttt
gtattttctttgattgttgtgcctatgttctctgtggaatcttctgcagc
tgagattctctcttccatgtcttgtattctgttgctgatgtttgcatcta
tggttccagatttctttcctaggttttctatctccagtgttgcctcactt
tgggttttctttattgtgtctacttccctttttaggtcttggatggtttt
attcaattccatcacctgtttggtcgtgttttcctgcaattctttaaggg
atttttgtgctttctctttaggtcttctacctgtttagcggtgttctcct
gtatttctttaagtgggttattaaagtccttcttgatgtcctctaccatc
atctgagctatgctttaaatcaaggactatctttccggtgtgttggggtt
tcccacgactgggtgggagttgtggagtgcctgcaatctggacgcatggg
tggagtggcctgattcctggctagcaagatccttacccttctctttttcc
atctggtaacccttctgggaagtt

gaattccatcagcatcttccatttgttaaaagccaacattttgaaaatgt
catttatatgaatgcctaaattctgctggggatttgaagtgatgcaggat
gatttgtcataccaaacaaggatgcaggatgactggttataacaaaacaa
gacttactataaagtacttctggtcaaagttgttgcattaagcaatagtt
aactgttcatgacacccatttaaaagaacaagtgttcttattttgtttga
gaaaccaaaataattgatgtctattaagtgttttactaagcaactacact
aacaagaaaagaagaactatgtagaaagaggaaccattgtaaaatgtatg
cctaagtaagtgtgttttgtgcaagattaggagactttttcaaacctttt
gggatatatatatatatatatatatatatatatatatatatatatatgta
tatatatatgtgtatatatgtgtgtatatatatatatatatatatacata
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_158132677_158133181
seq2: B6Ng01-266I02.g_69_569

seq1  GAATTCCATCAGCATCTTCCATTTGTTAAAAGCCAACATTTTGAAAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAGCATCTTCCATTTGTTAAAAGCCAACATTTTGAAAATGT  50

seq1  CATTTATATGAATGCCTAAATTCTGCTGGGGATTTGAAGTGATGCAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATATGAATGCCTAAATTCTGCTGGGGATTTGAAGTGATGCAGGAT  100

seq1  GATTTGTCATACCAAACAAGGATGCAGGATGACTGGTTATAACAAAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTCATACCAAACAAGGATGCAGGATGACTGGTTATAACAAAACAA  150

seq1  GACTTACTATAAAGTACTTCTGGTCAAAGTTGTTGCATTAAGCAATAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTACTATAAAGTACTTCTGGTCAAAGTTGTTGCATTAAGCAATAGTT  200

seq1  AACTGTTCATGACACCCATTTAAAAGAACAAGTGTTCTTATTTTGTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTCATGACACCCATTTAAAAGAACAAGTGTTCTTATTTTGTTTGA  250

seq1  GAAACCAAAATAATTGATGTCTATTAAGTGTTTTACTAAGCAACTACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAAAATAATTGATGTCTATTAAGTGTTTTACTAAGCAACTACACT  300

seq1  AACAAGAAAAGAAGAACTATGTAGAAAGAGGAACCATTGTAAAATGTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAAAAGAAGAACTATGTAGAAAGAGGAACCATTGTAAAATGTATG  350

seq1  CCTAAGTAAGTGTGTTTTGTGCAAGATTAGGAGACTTTTTCAAACCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGTAAGTGTGTTTTGTGCAAGATTAGGAGACTTTTTCAAACCTTTT  400

seq1  GGG--ATATATATATATATATATATATATATATATATATATATATATGTA  448
      |||  |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATATATATATATATATATATATATATATATATATATATATATATGTA  450

seq1  TATATGTGTGTGTATGTGTGTGTGTATATATACACACATATATATATACA  498
      ||||| | ||||||| | |||||||||||||      ||||||||||| |
seq2  TATATATATGTGTATATATGTGTGTATATAT------ATATATATATATA  494

seq1  CACATAT  505
       ||||||
seq2  TACATAT  501


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