BAC Information

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BAC

Clone NameB6Ng01-267B15
Chromosome3 (Build37)
Map Location 26,575,816 - 26,576,925
singlet/doubletsinglet
Overlap geneSpata16
Upstream geneNlgn1, LOC621017, LOC229152
Downstream geneLOC665258, Ect2, Aadacl1, LOC100040527, Tnfsf10, Ghsr, Fndc3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267B15.bB6Ng01-267B15.g
ACCGA070322GA070323
length1,1961,105
definitionB6Ng01-267B15.b B6Ng01-267B15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatgattttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacaccgagatattttatattat
tgtgactattgagaaaggtgttgtttccccaaattctttctcagcctgtt
tattcttgtgtaagaagaaaggccattgacttgtttgagttaattttata
tccagctactcaccgaagctgtttatcaggttaggagttctcctggtgga
attttaaggtcacttaataatacctatcgatatcatctgccacaggaatt
tgacttctctcaatgtatccccttgaatcttcttctggtggctcca

gaattctttaggaccggtcctcgactgtcacagttctcagcatctttggc
aacaatctgccttcagtgtggttcaacgcagagagagctttctttgatca
aggcagagagtagtttttacttatgggtataaatggatatttagaaggca
gtttgatgttattcagtttatttaaacaataataagtatcccattagacc
tatgacctctccaggcataggttgttaaacaggctaataatactagacat
ggattctctcctgtggaagcagaattctaagtagttggaagatggttgat
tgccaccataatggttatgtcactactgcatgggcaggcccatcttgtct
aacagattggttttgtatctcttaaggttaacgggaataaaaaaaatgtg
ttttttaataattaagcatgaagaaaatagatctcctgaaaaattaaaat
ttacaaatataagaaaaaaaggtatgaaccagaggactcatgtagcctcg
ggtgtcctgccaaaggacatggagtctgatgttctctaggcatgtgtgta
agcctggagcatgcagtgtggaaactcgggatctctccaggaggaaccaa
gagacaagtgaaacatgtattatgccagaagcagtgtggggcatcacttg
aaatcagacagatattaatacagatgctgagacataaatgaagagcactg
ggtcatagaccctacccaggactggttaaggtagagaccatagaggaaac
acagaagccctacttccaaattacattaagactttaatgctttctgcaga
tatcttaccctctcctcccaccttagatggtggtggtgactttaggcctt
tggagggaggtgttgtggggacaaatggggacagcctttcaaatacagcc
tcttttttgtgtcccctacttccatctccaaacgaaaagacctaagccaa
gagattcagccacattacctaccactttttgtttgccttatcactgcctg
aggaataggattcagatgcaggaacaggccataatttaagtatgcaggat
gaaccccacttacagactgaacttctattcggggtcatatattttctgct
tgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_26575816_26576925
seq2: B6Ng01-267B15.g_66_1170

seq1  GAATTCTTTAGGACCGGTCCTCGACTGTCACAGTTCTCAGCATCTTTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGGACCGGTCCTCGACTGTCACAGTTCTCAGCATCTTTGGC  50

seq1  AACAATCTGCCTTCAGTGTGGTTCAACGCAGAGAGAGCTTTCTTTGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCTGCCTTCAGTGTGGTTCAACGCAGAGAGAGCTTTCTTTGATCA  100

seq1  AGGCAGAGAGTAGTTTTTACTTATGGGTATAAATGGATATTTAGAAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGAGTAGTTTTTACTTATGGGTATAAATGGATATTTAGAAGGCA  150

seq1  GTTTGATGTTATTCAGTTTATTTAAACAATAATAAGTATCCCATTAGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATGTTATTCAGTTTATTTAAACAATAATAAGTATCCCATTAGACC  200

seq1  TATGACCTCTCCAGGCATAGGTTGTTAAACAGGCTAATAATACTAGACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACCTCTCCAGGCATAGGTTGTTAAACAGGCTAATAATACTAGACAT  250

seq1  GGATTCTCTCCTGTGGAAGCAGAATTCTAAGTAGTTGGAAGATGGTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTCTCCTGTGGAAGCAGAATTCTAAGTAGTTGGAAGATGGTTGAT  300

seq1  TGCCACCATAATGGTTATGTCACTACTGCATGGGCAGGCCCATCTTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCATAATGGTTATGTCACTACTGCATGGGCAGGCCCATCTTGTCT  350

seq1  AACAGATTGGTTTTGTATCTCTTAAGGTTAACGGGAATAAAAAAAATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATTGGTTTTGTATCTCTTAAGGTTAACGGGAATAAAAAAAATGTG  400

seq1  TTTTTTAATAATTAAGCATGAAGAAAATAGATCTCCTGAAAAATTAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATAATTAAGCATGAAGAAAATAGATCTCCTGAAAAATTAAAAT  450

seq1  TTACAAATATAAGAAAAAAAGGTATGAACCAGAGGACTCATGTAGCCTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAATATAAGAAAAAAAGGTATGAACCAGAGGACTCATGTAGCCTCG  500

seq1  GGTGTCCTGCCAAAGGACATGGAGTCTGATGTTCTCTAGGCATGTGTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCTGCCAAAGGACATGGAGTCTGATGTTCTCTAGGCATGTGTGTA  550

seq1  AGCCTGGAGCATGCAGTGTGGAAACTCGGGATCTCTCCAGGAGGAACCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGAGCATGCAGTGTGGAAACTCGGGATCTCTCCAGGAGGAACCAA  600

seq1  GAGACAAGTGAAACATGTATTATGCCAGAAGCAGTGTGGGGCATCACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAGTGAAACATGTATTATGCCAGAAGCAGTGTGGGGCATCACTTG  650

seq1  AAATCAGACAGATATTAATACAGATGCTGAGACATAAATGAAGAGCACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGACAGATATTAATACAGATGCTGAGACATAAATGAAGAGCACTG  700

seq1  GGTCATAGACCCTACCCAGGACTGGTTAAGGTAGAGACCATAGAGGAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATAGACCCTACCCAGGACTGGTTAAGGTAGAGACCATAGAGGAAAC  750

seq1  ACAGAAGCCCTACTTCCAAATTACATTAAGACTTTAATGCTTTCTGCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGCCCTACTTCCAAATTACATTAAGACTTTAATGCTTTCTGCAGA  800

seq1  TATCTTACCCTCTCCTCCCACCTTAGATGGTGGTGGTGACTTTAGGCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTACCCTCTCCTCCCACCTTAGATGGTGGTGGTGACTTTAGGCCTT  850

seq1  TGGAGGGAGGTGTTGTGGGGACAAATGGGGACAGCCTTTCAAATACAGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGAGGTGTTGTGGGGACAAATGGGGACAGCCTTTCAAATACAGCC  900

seq1  TCTTTTTTGTGTCCCCTACTTCCATCTCCAAACGAAAAAGACCTAAGCCA  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCTTTTTTGTGTCCCCTACTTCCATCTCCAAACG-AAAAGACCTAAGCCA  949

seq1  AGAGATTCAGCCACATTACCCTAACCAC-TTTTGTTTGCCCTTATCACTG  999
      ||||||||||||||||||||   ||||| ||||||||| |||||||||||
seq2  AGAGATTCAGCCACATTACC--TACCACTTTTTGTTTG-CCTTATCACTG  996

seq1  CCCTGAGGAATAAGAATTCAGATGCAGGAACAGGGCATAATTAAATTATG  1049
       |||||||||| || ||||||||||||||||||| ||||||| || ||||
seq2  -CCTGAGGAAT-AGGATTCAGATGCAGGAACAGGCCATAATTTAAGTATG  1044

seq1  CA-GATGACACCCCACTACCAAGACTGAACTTCTATTTCGGGGTCATATA  1098
      || ||||| ||||||||  | |||||||||||||| ||||||||||||||
seq2  CAGGATGA-ACCCCACTTAC-AGACTGAACTTCTA-TTCGGGGTCATATA  1091

seq1  TTT--TTCTTGTTG  1110
      |||  | |||||||
seq2  TTTTCTGCTTGTTG  1105


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