BAC Information

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BAC

Clone NameB6Ng01-267M22
Chromosome3 (Build37)
Map Location 59,506,314 - 59,700,853
singlet/doubletdoublet
Overlap geneLOC433597, LOC433598, LOC100040407, LOC669780, EG666803
Upstream geneLOC100040293, Clrn1, LOC100040416, Gpr171, P2ry14, Gpr87, P2ry13, P2ry12, Igsf10, EG666751, EG666756, EG229330, EG435732
Downstream geneC130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1, LOC669823, LOC100040485, Mbnl1, LOC676933, LOC100040501, EG666853
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267M22.bB6Ng01-267M22.g
ACCGA070830GA070831
length6371,195
definitionB6Ng01-267M22.b B6Ng01-267M22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,700,306 - 59,700,853)(59,506,314 - 59,507,494)
sequence
gaattcccaacaaacttactaatgctgaccaaacaaagttaaaattgttg
tagtaagaaaaattccaaggtgatagtaatcaaaaatatcaaggttccca
gctactgggagatacacactatctgacagtaaatcaatcaataagcttag
aactctgtgaagaaattttttagatggaatgaagttttcaacaaatagct
ttcagatgaagtggctagattagttagcctaaccaatcatttgattcctt
aaaccaaggagttttttacacttagacacaaaacacaaaccttagagggt
aaaaggcgagcgaggccatctgagaatttctcaattgcctcttgaagtag
atgggatcacatggcagcctttagaggagagagttgttttcaataaaata
taaagaaaagatggaaggagggaagactactctaggtatggaagaacatg
actgaagatccaccaagagttcattggaaagaatcatgagttcaaggtga
acctcggcagtatagcaagctctaagttgatcttgctttgggataagacc
ccaaaatataaaaaaggcaagaatagagaaaggtatagagggagatattg
gaggagaatgaaaagagagaaggagtataagaataat
cgatgatttgtgtctcatcattaatggaagaggggaaggttgctgatata
gtttagactcatagaggtgagcaagaaaaacagcaggaaatggtgcggaa
attatctgaaggctctaaaccacttacaagtcttatagtttcattaaaca
tcatggatgctattcattgactcttagagtgggagaaacaggaacacaaa
accaccctttttaagtgctttcttccagcaagaggaaataaattttagtg
agtgttgttttgtcaaaggcagtacatttctacttctctgaaagatagtt
tgtttttgatcatatgcgatagtctccctgtaactgttgtaccacaagaa
aagaagatttgagggcacccagtcttacttccattaatcaacatttcagt
tatttctgtgtttgtagatagaaacaggtatatagtacttaccacagcaa
gggaacatgaaacaaaagggagagaggtagattccccagatgagacaccc
tagaaccaagttaaatatacttttacacattgtggtttcccttgtgctca
aggaacttctctactcaggaaatctgaaacacctgacagtgaacactttt
ttacttagtagaatctgtttacttctttaaatggtgaataaaataatcca
tctgctagcctgtatcacctcagtgaccatcttggggcaataggagttca
tacagggcccttacatgaaccctctaaattcctaaggtcaataatgcatg
atgctaacaggaatagggcatgagaaagcagccattgttttcctttgtcc
cactggagaccaccaaaccatcagaaaacactaggcctcaatacaaccaa
actctttgagtgtaacaggttcctcagcacttagtaggcccttagcataa
cttactaactgatggaaatgccattcaagaagttaaaacacatcatgtag
acaataacaccagccaaacaacaacaaaaacccttactcatcaaagttca
tatttctggagcagtttcttgctttttgggttttctgtagttctgcttta
gcttacctgttcttgtaactgaagtatttttacacgaagtggaagaaatt
ctctgctgttgtttgagacctcaactgtggccctcggtggttttctgaag
ttgctttacgaaagaatgtcttggtgaaatacgacaccgtggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_59700306_59700853
seq2: B6Ng01-267M22.b_46_593 (reverse)

seq1  TCTTATCCCAAAGCAAGATCAACTTAGAGCTTGCTATACTGCCGAGGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCCCAAAGCAAGATCAACTTAGAGCTTGCTATACTGCCGAGGTTC  50

seq1  ACCTTGAACTCATGATTCTTTCCAATGAACTCTTGGTGGATCTTCAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAACTCATGATTCTTTCCAATGAACTCTTGGTGGATCTTCAGTCA  100

seq1  TGTTCTTCCATACCTAGAGTAGTCTTCCCTCCTTCCATCTTTTCTTTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCCATACCTAGAGTAGTCTTCCCTCCTTCCATCTTTTCTTTATA  150

seq1  TTTTATTGAAAACAACTCTCTCCTCTAAAGGCTGCCATGTGATCCCATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGAAAACAACTCTCTCCTCTAAAGGCTGCCATGTGATCCCATCT  200

seq1  ACTTCAAGAGGCAATTGAGAAATTCTCAGATGGCCTCGCTCGCCTTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAGAGGCAATTGAGAAATTCTCAGATGGCCTCGCTCGCCTTTTAC  250

seq1  CCTCTAAGGTTTGTGTTTTGTGTCTAAGTGTAAAAAACTCCTTGGTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAGGTTTGTGTTTTGTGTCTAAGTGTAAAAAACTCCTTGGTTTAA  300

seq1  GGAATCAAATGATTGGTTAGGCTAACTAATCTAGCCACTTCATCTGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCAAATGATTGGTTAGGCTAACTAATCTAGCCACTTCATCTGAAAG  350

seq1  CTATTTGTTGAAAACTTCATTCCATCTAAAAAATTTCTTCACAGAGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGTTGAAAACTTCATTCCATCTAAAAAATTTCTTCACAGAGTTCT  400

seq1  AAGCTTATTGATTGATTTACTGTCAGATAGTGTGTATCTCCCAGTAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTATTGATTGATTTACTGTCAGATAGTGTGTATCTCCCAGTAGCTG  450

seq1  GGAACCTTGATATTTTTGATTACTATCACCTTGGAATTTTTCTTACTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCTTGATATTTTTGATTACTATCACCTTGGAATTTTTCTTACTACA  500

seq1  ACAATTTTAACTTTGTTTGGTCAGCATTAGTAAGTTTGTTGGGAATTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTTAACTTTGTTTGGTCAGCATTAGTAAGTTTGTTGGGAATTC  548

seq1: chr3_59506314_59507494
seq2: B6Ng01-267M22.g_77_1271

seq1  CGATGATTTGTGTCTCATCATTAATGGAAGAGGGGAAGGTTGCTGATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGATTTGTGTCTCATCATTAATGGAAGAGGGGAAGGTTGCTGATATA  50

seq1  GTTTAGACTCATAGAGGTGAGCAAGAAAAACAGCAGGAAATGGTGCGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGACTCATAGAGGTGAGCAAGAAAAACAGCAGGAAATGGTGCGGAA  100

seq1  ATTATCTGAAGGCTCTAAACCACTTACAAGTCTTATAGTTTCATTAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTGAAGGCTCTAAACCACTTACAAGTCTTATAGTTTCATTAAACA  150

seq1  TCATGGATGCTATTCATTGACTCTTAGAGTGGGAGAAACAGGAACACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGATGCTATTCATTGACTCTTAGAGTGGGAGAAACAGGAACACAAA  200

seq1  ACCACCCTTTTTAAGTGCTTTCTTCCAGCAAGAGGAAATAAATTTTAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCCTTTTTAAGTGCTTTCTTCCAGCAAGAGGAAATAAATTTTAGTG  250

seq1  AGTGTTGTTTTGTCAAAGGCAGTACATTTCTACTTCTCTGAAAGATAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGTTTTGTCAAAGGCAGTACATTTCTACTTCTCTGAAAGATAGTT  300

seq1  TGTTTTTGATCATATGCGATAGTCTCCCTGTAACTGTTGTACCACAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGATCATATGCGATAGTCTCCCTGTAACTGTTGTACCACAAGAA  350

seq1  AAGAAGATTTGAGGGCACCCAGTCTTACTTCCATTAATCAACATTTCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGATTTGAGGGCACCCAGTCTTACTTCCATTAATCAACATTTCAGT  400

seq1  TATTTCTGTGTTTGTAGATAGAAACAGGTATATAGTACTTACCACAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGTGTTTGTAGATAGAAACAGGTATATAGTACTTACCACAGCAA  450

seq1  GGGAACATGAAACAAAAGGGAGAGAGGTAGATTCCCCAGATGAGACACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACATGAAACAAAAGGGAGAGAGGTAGATTCCCCAGATGAGACACCC  500

seq1  TAGAACCAAGTTAAATATACTTTTACACATTGTGGTTTCCCTTGTGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCAAGTTAAATATACTTTTACACATTGTGGTTTCCCTTGTGCTCA  550

seq1  AGGAACTTCTCTACTCAGGAAATCTGAAACACCTGACAGTGAACACTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTTCTCTACTCAGGAAATCTGAAACACCTGACAGTGAACACTTTT  600

seq1  TTACTTAGTAGAATCTGTTTACTTCTTTAAATGGTGAATAAAATAATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAGTAGAATCTGTTTACTTCTTTAAATGGTGAATAAAATAATCCA  650

seq1  TCTGCTAGCCTGTATCACCTCAGTGACCATCTTGGGGCAATAGGAGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTAGCCTGTATCACCTCAGTGACCATCTTGGGGCAATAGGAGTTCA  700

seq1  TACAGGGCCCTTACATGAACCCTCTAAATTCCTAAGGTCAATAATGCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGCCCTTACATGAACCCTCTAAATTCCTAAGGTCAATAATGCATG  750

seq1  ATGCTAACAGGAATAGGGCATGAGAAAGCAGCCATTGTTTTCCTTTGT-C  799
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATGCTAACAGGAATAGGGCATGAGAAAGCAGCCATTGTTTTCCTTTGTCC  800

seq1  CACTGGAGACCACCAAACCATCAGAAAACACTAGGCCTCAATACAACCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAGACCACCAAACCATCAGAAAACACTAGGCCTCAATACAACCAA  850

seq1  ACTC-TTGAGTGTAACAGG-TCCTCAGCACTTAGTAGGCCCTTAGCATAA  897
      |||| |||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACTCTTTGAGTGTAACAGGTTCCTCAGCACTTAGTAGGCCCTTAGCATAA  900

seq1  CTTACTAACTGATGGAAATGCCATTCAAGAAG-TAAAACACATCATGTAG  946
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTTACTAACTGATGGAAATGCCATTCAAGAAGTTAAAACACATCATGTAG  950

seq1  ACAATACCACCAGCCAAACAACAACAAAAACCCTAACTCATCAAAGTTCA  996
      |||||| ||||||||||||||||||||||||||| |||||||||||||||
seq2  ACAATAACACCAGCCAAACAACAACAAAAACCCTTACTCATCAAAGTTCA  1000

seq1  TAATTCTGGAGCAGTTTCTTGCTTTTTGG--TTTCTGTAGTTCTGCTTTT  1044
      || ||||||||||||||||||||||||||  ||||||||||||||| |||
seq2  TATTTCTGGAGCAGTTTCTTGCTTTTTGGGTTTTCTGTAGTTCTGC-TTT  1049

seq1  AGC-TAACTGTTCTTGTTAACTGAAGTATTTT---ACGAAGTG--AGAA-  1087
      ||| || ||||||||| |||||||||||||||   ||||||||  |||| 
seq2  AGCTTACCTGTTCTTG-TAACTGAAGTATTTTTACACGAAGTGGAAGAAA  1098

seq1  -TTTCTGCTGTTGTTGGAGA-CTCAACTGTGCCTCGTGGTGTTTTTCTGA  1135
       | |||||||||||| |||| |||||||||| | |  |||| ||||||| 
seq2  TTCTCTGCTGTTGTTTGAGACCTCAACTGTGGCCCTCGGTGGTTTTCTG-  1147

seq1  AAGTTGTTTTATGAGAAGATGTTTTGGTGAAGTA-GATA-CGTGGTGT  1181
      |||||| |||| || |  |||| |||||||| || || | ||||||||
seq2  AAGTTGCTTTACGAAAGAATGTCTTGGTGAAATACGACACCGTGGTGT  1195