BAC Information

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BAC

Clone NameB6Ng01-273O02
Chromosome3 (Build37)
Map Location 45,387,158 - 45,387,684
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC676484, LOC100039296, Pcdh10, LOC100039282
Downstream geneLOC433580, LOC671801, EG241989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273O02.b
ACCGA075335
length1,028
definitionB6Ng01-273O02.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccatttttaatggagttatttgtttt
tctggggtccagattcttgagctctttgtatatattggatatcagtcccc
tatctgatttaggagaggtaaagatcttttcccaatctgttggtggcctt
tatgtcttattgatggtgtctttttccttacagaagctttgcaattttat
gaggacccatttgtctattctcgatcttacagctcaggccattgctgttc
tattcaggaaattttcccctgtacccatatcttcgaggcttttacccact
ttctcctctataagtttcactgtctctggttttatgtggagttccttgat
ccacttagatttgaccttagtacaaggagataggaatggattaattggca
ttcttctacatgataaccaccagttgtacctagacaacttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcaaatatcaagtg
accataggtgtgtgggttcatctctgggtcttcaattctattccattggt
ctacttgtctgtccctataccagtaccatgcagtttttatcacaattgtt
ctgtagtacagctttaagtcaggcatggtgattacaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atttgcttatttccctttctaatttgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagacttgaatttcttatcatac
agatctttccacttcccttagttagagtcccgcccaaggtattttataat
tatttgtgacttattgtgaagggtgtttgttctcctaatttcctttctca
gcctgttttgtccttttgtgtacagaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_45387158_45387684
seq2: B6Ng01-273O02.b_538_1073 (reverse)

seq1  TTTCTCTACACAAA--GAATAAACAGGCTGAGAAA-GAAATTAGG-GAAA  46
      ||||| ||||||||  ||  ||||||||||||||| ||||||||| ||| 
seq2  TTTCTGTACACAAAAGGACAAAACAGGCTGAGAAAGGAAATTAGGAGAAC  50

seq1  CAACACCCTTCTCAAT-AGCCACAAATAA-TATAAAATATC-TCGGCGTG  93
       |||||||||| |||| || ||||||||| ||||||||| | | |||| |
seq2  AAACACCCTTCACAATAAGTCACAAATAATTATAAAATACCTTGGGCGGG  100

seq1  ACTCTAACGAA-GGAAGT-GAAAGATCTGTATGATAAAAACTTCAAGTCC  141
      |||||||| || |||||| |||||||||||||||||| || |||||||| 
seq2  ACTCTAACTAAGGGAAGTGGAAAGATCTGTATGATAAGAAATTCAAGTCT  150

seq1  CTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATG  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATG  200

seq1  CTCATGGATTGGCAGGACCAACATTGTAAAAATGGCTATCTTGCCAAAAG  241
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAG  250

seq1  CAATCTACAGATTCAATGCAATCCCCATTAAAATTCCAACTCAATTCTTC  291
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTC  300

seq1  AACGAACTAGAAGGAGCAATTTGCAAATTCATCTGGAATAACAAAAAACC  341
      ||| || ||||| | | |||  ||||||||||||||||||||||||||||
seq2  AACAAATTAGAAAGGGAAATAAGCAAATTCATCTGGAATAACAAAAAACC  350

seq1  GAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAACTTCTGGTGGAATCA  391
       ||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  TAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAACCTCTGGTGTAATCA  400

seq1  CCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCA  441
      ||||||||||| ||||||| ||||||||| ||||||||||||||||||||
seq2  CCATGCCTGACTTAAAGCTGTACTACAGAACAATTGTGATAAAAACTGCA  450

seq1  TGGTACTGGTATAGAGACAGACAAGTGGACCAATGGAATAGAATTGAAGA  491
      |||||||||||||| ||||||||||| |||||||||||||||||||||||
seq2  TGGTACTGGTATAGGGACAGACAAGTAGACCAATGGAATAGAATTGAAGA  500

seq1  CCCAGAAATGAACCCACACACCTATGGTCACTTGAT  527
      |||||| |||||||||||||||||||||||||||||
seq2  CCCAGAGATGAACCCACACACCTATGGTCACTTGAT  536