BAC Information

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BAC

Clone NameB6Ng01-278I09
Chromosome3 (Build37)
Map Location 63,909,096 - 63,909,552
singlet/doubletsinglet
Overlap geneEG56544
Upstream geneLOC666967, Mme, Plch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032
Downstream gene4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278I09.bB6Ng01-278I09.g
ACCGA078746GA078747
length552972
definitionB6Ng01-278I09.b B6Ng01-278I09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgtttagctctgtaccccatttttaatagggttatttggttttctgga
gtacaacttcttgagttctttatatatattgcatattagcccgctttcag
atttaggattgtttaagctcttttcccaatctgtagtttaccttttggtc
ttattgacagtgtcctttgcctttcataagctttgcaattttatgaggtc
ccatttgtcgattcttgatcttacagcacaagccattagtgttctgttca
agaatctttagcctgtgcccatacctttcaggcttttccccacgttctcc
tctataagtttcagtgtctctggttttatgtggagttctttgaccaatta
gatttgagctttgtacaaggagataaggatggatcaattcacattcttgt
acatgaaaacttccagttgacccagcaccggttgttgaagatgctgtctt
ctttcccctggatggttttaacacctttggcaaaaatcaagtgaacatag
gtgggtgggttcatttccgggtcatcaattctattcccttgatccaactg
gt
gaattctggtttttttcattgtctggatctctttgtccctgcttacttga
gcaccaaaggcaaattcaaagtggctgtggaaatatttgccattttggca
tccagctatggcttgttaggctgtctatttcttcccaagtgcttcattat
cttgctgaggccaaagaggaacactgatgaaactgttagtggaagagtcc
ccactgttgacaggagcatccagctcacctcagcttctgtgagcagtgag
cttaacagcactacagtgtccactgttctggatgagtagagcagtgagat
ccatgtgacatgcaaggatgtctccttagatgatatcctggctcaacctt
cccttttatgtttaatcttaagtagcttctgttgttttagtgtaatattg
gttgtggttgtgtttatgtaagtttaacatggtgaatgatatcttgttct
gtgacatgtcactctgcattgaatggagtatcacttatgatttaaattag
aaagcatatcattgagattttaaagtagagggcataactaaaaaaaaaaa
tagaaaagaaagtggggaagagacttaagcacattggcacagggggaaat
ttcctgacagaacaccaatagcttatgctctaagatcaagaattgacaag
tgagaccttgtaaaattgcaaagcaattttaaggcaaaggacagtgtcaa
taggacaaaactgcaaccaacagattgggaaaagatgtttaccaactcca
catctgttagcgggctaatatccaattcatacaaagtactcaacaagttt
agactctggagaaccaaataaccctattaaattggttatagaactaaaca
aaaaattctcaactgaggaataccaagtggtgagacacacctaaagaaat
gtccaacatccttagtcatcagagaatgcaagtcaaataactctgagatt
ccacctcataccagtcagaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63909096_63909552
seq2: B6Ng01-278I09.g_72_527

seq1  CTGGTCTTTTTCATTGTCTGGATCTCTTTTGTCCCTGCTTACTTGAGCAC  50
      ||||| |||||||||||||||||||| |||||||||||||||||||||||
seq2  CTGGTTTTTTTCATTGTCTGGATCTC-TTTGTCCCTGCTTACTTGAGCAC  49

seq1  CAAAGGCAAATTCAAAGTGGCTGTGGAAATATTTGCCATTTTGGCATCTA  100
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAAAGGCAAATTCAAAGTGGCTGTGGAAATATTTGCCATTTTGGCATCCA  99

seq1  GCTATGGCTTGTTAGGCTGTCTATTTCTTCCCAAGTGCTTCATTATCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGGCTTGTTAGGCTGTCTATTTCTTCCCAAGTGCTTCATTATCTTG  149

seq1  CTGAGGCCAAAGAGGAACACTGATGAAACTGTTGGTGGAAGAGTCCCCAC  200
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTGAGGCCAAAGAGGAACACTGATGAAACTGTTAGTGGAAGAGTCCCCAC  199

seq1  TGTTGACAGGAGCATCCAGCTGACCTCAGCTTCTGTGAGCAGTGAGCTTA  250
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGTTGACAGGAGCATCCAGCTCACCTCAGCTTCTGTGAGCAGTGAGCTTA  249

seq1  ACAGCACCACAGTGTCCACTGTTCTAGATGAGTAGAGCTGTGAATTTCAT  300
      ||||||| ||||||||||||||||| |||||||||||| ||||  | |||
seq2  ACAGCACTACAGTGTCCACTGTTCTGGATGAGTAGAGCAGTGAGATCCAT  299

seq1  GTGGCATGCAGGGATGTCACCTATCATGACACCCTTGCTCAACCTGCATT  350
      ||| |||||| ||||||| |||   |||| | ||| ||||||||| |  |
seq2  GTGACATGCAAGGATGTCTCCTTAGATGATATCCTGGCTCAACCTTCCCT  349

seq1  TTTGTGTTTCATCTGAAGCATCTGCTGATGTTGTAGGGTAATATTAGTTG  400
      ||| ||||| |||| ||| | || ||| |||| ||| |||||||| ||||
seq2  TTTATGTTTAATCTTAAGTAGCTTCTGTTGTTTTAGTGTAATATTGGTTG  399

seq1  TGGGTGTGTTGATGTAAGGTTAACCTGGTAAATGGTATCTTGTTCTGTGA  450
      ||| |||||| ||||||| ||||| |||| |||| |||||||||||||||
seq2  TGGTTGTGTTTATGTAAGTTTAACATGGTGAATGATATCTTGTTCTGTGA  449

seq1  CATGTCA  457
      |||||||
seq2  CATGTCA  456