BAC Information

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BAC

Clone NameB6Ng01-280K24
Chromosome3 (Build37)
Map Location 137,280,908 - 137,281,946
singlet/doubletsinglet
Overlap genenone
Upstream genePpp3ca, LOC668870, LOC100039447, Emcn, EG229862
Downstream geneDdit4l, LOC668874, H2afz, Dnajb14, Map2k1ip1, Dapp1, EG329763, LOC100039528, Mttp, Rg9mtd2, 4930579F01Rik, Adh7, Adh1, Adh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280K24.bB6Ng01-280K24.g
ACCGA080352GA080353
length1,0481,140
definitionB6Ng01-280K24.b B6Ng01-280K24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tacataggtagatagtcttacatgcccatgtagttatccatccttcaaca
gcacccctccatggaccactccagtgccctaatctagtgagtcctcttag
gtcttaggccctttacatcctgtcccaccaaaactacacactattttatg
acacaaatctgtgggttgctgtagaagaggattcaacctaagaacttacc
caaagtgttgagtagatacagggttctgttgggtggtccacgtggcattc
tgcagctgtaaaacagagtgagttaaaccatggagtgactccatgatgta
catccatctcagggagtagaagttaggtgcatgggctgtggagcccgcct
gcctgggtttgtattccagagaaggtatttgatagcttggtaaatatgaa
taatgaactggatatttctgttggaacagtttactttttaagatgagaat
taaaataagttttccctattagagttatagggattcaggtaatgagacta
taactcactgtataaattttagccatgattacagtgacaaaatttactgt
acctttggaaaaaaaaaaccctccagtgttctggtgacattcttatgata
acattgctgggagaatgtttgtatgaactcaagagtatgtgtacaagttt
tatcatttgtgcacaggaattcatttgatgatgttctgagtattaattac
aggagacattgaaaatacaacagaatgccaggtaaatattatttctattc
caggagaattatggttagataagcagcagatatacaaaattaccattgca
ttggttcactctgttgtttctgtgaaagaatacctaaggttgggtaactt
atcagagcagagatttgtcttctacagtgcttgaatttctaggaaatcca
aagtcagtgagggccgagttctgggaaggaccttctctttgtgttgttct
gtggagaaggcagaagatcagaggagcatttcattgagagaggatgaaag
ggacaggggatggaaaagttgaaggccaaggggggtaagaaagaagga
gaattctcacctggggaataccgaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcttcagaaaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtataaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccgggggatcccgcaatacctctcctgggc
atatatccagaagatgttgcaactggtaagaaggacacatgctccactat
gttcatagaagccttattcataatagacagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaggaatgaatttatgaaattcctaggca
agatgttggacctggagggcatcatcctgattgacgtaacataatcacaa
aagaactcaaataatatgtactcactgataagtggatattaacccagaaa
cttagtatacctgagatataagatacaatttgcaaaacacatgaaactga
agaagaacgaagaccaatgtggccacttgccccttcttagaattgggaac
aatcacccatggaaggagttacagagacaaagtttgtagccgagacaaaa
gatgggatccatcccataatcagcctccaaacgatgacaccattgcatac
actagcaagagttgctgaaggaccctgatatagctgtcttcttgtgagac
taggctggggcctagcaaacacataagtggatgctcacagtcagctagtg
atggatcacagggccccaatggaggagctagagaaggtacccaggagctt
aagggatctgcaccctataggtggacacattatggactaacataccctgg
agctctttacctctagctgcatatatatcaaagatgaccttaatcgcatc
cacttggaagagtggtccattggaactgccaactttaattgccaattacg
gaatgtcaggcaaaagtggcaatgggggtgctaaggcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_137280908_137281946
seq2: B6Ng01-280K24.b_54_1101 (reverse)

seq1  TCCTTCTTTCTT-CCCCCCTT-GCCCTCAACTTTTCCATCCCCTGTCCCT  48
      |||||||||||| |||||||| ||| ||||||||||||||||||||||||
seq2  TCCTTCTTTCTTACCCCCCTTGGCCTTCAACTTTTCCATCCCCTGTCCCT  50

seq1  TTCATCCTCTCTC-ATG-AATGCTCTTCTGTTCTTCTGCCTTCTCCACAG  96
      ||||||||||||| ||| ||||||| |||| |||||||||||||||||||
seq2  TTCATCCTCTCTCAATGAAATGCTCCTCTGATCTTCTGCCTTCTCCACAG  100

seq1  AACAACAC-AAGAG-AGGTCCTTCCCAG-ACTCGGCCCTCACTGACTTTG  143
      |||||||| ||||| ||||||||||||| |||||||||||||||||||||
seq2  AACAACACAAAGAGAAGGTCCTTCCCAGAACTCGGCCCTCACTGACTTTG  150

seq1  GATTTCCTAG-AATTC-AGCACTGTAGAAGACAAATCTCTGCTCTGATAA  191
      |||||||||| ||||| |||||||||||||||||||||||||||||||||
seq2  GATTTCCTAGAAATTCAAGCACTGTAGAAGACAAATCTCTGCTCTGATAA  200

seq1  GTTACCCAACCTTAGGTATTCTTTCACAGAAACAACAGAGTGAACCAATG  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCCAACCTTAGGTATTCTTTCACAGAAACAACAGAGTGAACCAATG  250

seq1  CAATGGTAATTTTGTATATCTGCTGCTTATCTAACCATAATTCTCCTGGA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTAATTTTGTATATCTGCTGCTTATCTAACCATAATTCTCCTGGA  300

seq1  ATAGAAATAATATTTACCTGGCATTCTGTTGTATTTTCAATGTCTCCTGT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATAATATTTACCTGGCATTCTGTTGTATTTTCAATGTCTCCTGT  350

seq1  AATTAATACTCAGAACATCATCAAATGAATTCCTGTGCACAAATGATAAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATACTCAGAACATCATCAAATGAATTCCTGTGCACAAATGATAAA  400

seq1  ACTTGTACACATACTCTTGAGTTCATACAAACATTCTCCCAGCAATGTTA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTACACATACTCTTGAGTTCATACAAACATTCTCCCAGCAATGTTA  450

seq1  TCATAAGAATGTCACCAGAACACTGGAGGGTTTTTTTTTTCCAAAGGTAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGAATGTCACCAGAACACTGGAGGGTTTTTTTTTTCCAAAGGTAC  500

seq1  AGTAAATTTTGTCACTGTAATCATGGCTAAAATTTATACAGTGAGTTATA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATTTTGTCACTGTAATCATGGCTAAAATTTATACAGTGAGTTATA  550

seq1  GTCTCATTACCTGAATCCCTATAACTCTAATAGGGAAAACTTATTTTAAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATTACCTGAATCCCTATAACTCTAATAGGGAAAACTTATTTTAAT  600

seq1  TCTCATCTTAAAAAGTAAACTGTTCCAACAGAAATATCCAGTTCATTATT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTTAAAAAGTAAACTGTTCCAACAGAAATATCCAGTTCATTATT  650

seq1  CATATTTACCAAGCTATCAAATACCTTCTCTGGAATACAAACCCAGGCAG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTACCAAGCTATCAAATACCTTCTCTGGAATACAAACCCAGGCAG  700

seq1  GCGGGCTCCACAGCCCATGCACCTAACTTCTACTCCCTGAGATGGATGTA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGCTCCACAGCCCATGCACCTAACTTCTACTCCCTGAGATGGATGTA  750

seq1  CATCATGGAGTCACTCCATGGTTTAACTCACTCTGTTTTACAGCTGCAGA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGGAGTCACTCCATGGTTTAACTCACTCTGTTTTACAGCTGCAGA  800

seq1  ATGCCACGTGGACCACCCAACAGAACCCTGTATCTACTCAACACTTTGGG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACGTGGACCACCCAACAGAACCCTGTATCTACTCAACACTTTGGG  850

seq1  TAAGTTCTTAGGTTGAATCCTCTTCTACAGCAACCCACAGATTTGTGTCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCTTAGGTTGAATCCTCTTCTACAGCAACCCACAGATTTGTGTCA  900

seq1  TAAAATAGTGTGTAGTTTTGGTGGGACAGGATGTAAAGGGCCTAAGACCT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGTGTGTAGTTTTGGTGGGACAGGATGTAAAGGGCCTAAGACCT  950

seq1  AAGAGGACTCACTAGATTAGGGCACTGGAGTGGTCCATGGAGGGGTGCTG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGACTCACTAGATTAGGGCACTGGAGTGGTCCATGGAGGGGTGCTG  1000

seq1  TTGAAGGATGGATAACTACATGGGCATGTAAGACTATCTACCTATGTA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGATGGATAACTACATGGGCATGTAAGACTATCTACCTATGTA  1048