BAC Information

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BAC

Clone NameB6Ng01-283D15
Chromosome3 (Build37)
Map Location 111,338,806 - 111,480,233
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043190, LOC668712
Downstream geneLOC625585, EG229746, LOC668717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283D15.bB6Ng01-283D15.g
ACCGA082241GA082242
length1,1411,154
definitionB6Ng01-283D15.b B6Ng01-283D15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,338,806 - 111,339,710)(111,479,066 - 111,480,233)
sequence
gaattctttgtttagcttagtgccccattttttaatggggttatatgcac
tcactgataagtggatattagccaagaaaggtagaatacccaagatgcaa
cttgcaaaacacatgaaaatcaagaagaaggaagattaaagtgtggatac
tttgttgctccttataacagggaaccaaatacccatggaaggagttatag
agacaaagtttggagctgagatgaaaggatggaccaaccagagactgccc
cacccgggaatccatcccatagtaagccaccaatcccagacactatttca
tctgccagaaaggttttgctgaaaggaccctgatatagctgtctcttgtg
aggctatgccagtgcctggcaaagacagaagtagatgctcacagtcatct
attggttggaacacagtgcccccaatggagcagcagagaaagtacccaac
gagctgaaggggtctgcaaacctataggtggaacaacaatatgaactagc
cagtacccccagagcccatgtctctagctgcatatgtagcagaagatggt
ctagttggccatcattgggaagagaggccccttggtcttgcacactttat
atgccccagtacaggggaacaccggggccaagaagagagagtcggttggt
agggaaacagagtgggtggaatgtataggggaaattctggatagcatttt
gaatgtaaataaagaaaatgataaaaattgggaaaaaaacataggatgaa
ttgaaacaattgagttttaggagtaactcattttgcttggttgtggatta
aacaatgagcacaatgaaaatcatttgagactcagaaagcatttaagaaa
gaaaatggtttttatagtgaataaaactgagatggagtattagtgtgcca
atcaacaaataaaagaataatgtgaagaagagagaggaaaaaacaacaga
aactaatacaaacactaaaaatttaaactctaagtgtattactaagatta
taagccatagttttcactacattttctgatctaaatagtttaaatatttc
catttctggtggtggaggagactatagtagatagaaaaaaattgccctta
tttgcattctgttgactgtgcaaacacaaaaaaataagttg

gaattcatgcataaaatttctaattccctgggaaatgaaagattccgatg
ctatatccaagcaaatctatctatttgaccaaagactgtgttggaaacgg
ccaaagtaataagaccaaatttttgagaggatcatcccgaaggagcaatg
tcagatgatctcttggagatatcctcaacatgaattttcttctatcacgg
catttttaaacaaaatttctctttgtggtttgttttttattttgtttttg
tttttgtctctcactgccattctccccaattctcatctctcccattgttc
cctagctccatttgtagtcacatttgccttttcatgtagactcaaaggtt
tgtctttctttaccactacttagtcaatcatggtgtgcctaattttatat
ttacaaacactcttaacctttttattttattttattttttggcctgccta
tcaacattgggattaggacataaagtgaatgtactatatttatctgcttt
tagtctaggcagtcatcttgtttactataaaatttctagctccacctatt
tttgttcaaattccgtagtatcattttttctttaagagctgaagaaaatt
ccatgatctacacattctgtagtttcattatttattttccttggagatac
tcactactatatactactctaaaggtattcatttattcaatctcttttat
ccttgtattattcattatatgaaaagtcataagataaaatgtataaaatg
gtggcgcacgcctttaattccagcacttgggaggcagaggcaggtggatt
tctgagttcgaggccagcctggtctacaaagtgagttccagtacatccag
agctatacagagaaactctgtctcgaaacttttgctttaaacttcagatt
ttaatacacttcaatgtactcagtttttattgctatattctgtgaattca
gtgaaatttggaatctctatttctatttctcagattatgagtgtttctgg
attcagtttactctagcttctaagctgtgcagggctcaaagttcatggat
tgaagaagattcagcagccatgccactaaatcagctatctttctgactca
tctatcaatctgaagggtattggccatcaggcataacctgaatactgaac
tgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_111338806_111339710
seq2: B6Ng01-283D15.b_272_1182

seq1  GGACCAACCAGAGACTGCCCCACCCGGGAATCCATCCCATAGTAAGCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAACCAGAGACTGCCCCACCCGGGAATCCATCCCATAGTAAGCCAC  50

seq1  CAATCCCAGACACTATTTCATCTGCCAGAAAGGTTTTGCTGAAAGGACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCCAGACACTATTTCATCTGCCAGAAAGGTTTTGCTGAAAGGACCC  100

seq1  TGATATAGCTGTCTCTTGTGAGGCTATGCCAGTGCCTGGCAAAGACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATAGCTGTCTCTTGTGAGGCTATGCCAGTGCCTGGCAAAGACAGAA  150

seq1  GTAGATGCTCACAGTCATCTATTGGTTGGAACACAGTGCCCCCAATGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATGCTCACAGTCATCTATTGGTTGGAACACAGTGCCCCCAATGGAG  200

seq1  CAGCAGAGAAAGTACCCAACGAGCTGAAGGGGTCTGCAAACCTATAGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAGAAAGTACCCAACGAGCTGAAGGGGTCTGCAAACCTATAGGTG  250

seq1  GAACAACAATATGAACTAGCCAGTACCCCCAGAGCCCATGTCTCTAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACAATATGAACTAGCCAGTACCCCCAGAGCCCATGTCTCTAGCTG  300

seq1  CATATGTAGCAGAAGATGGTCTAGTTGGCCATCATTGGGAAGAGAGGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTAGCAGAAGATGGTCTAGTTGGCCATCATTGGGAAGAGAGGCCC  350

seq1  CTTGGTCTTGCACACTTTATATGCCCCAGTACAGGGGAACACCGGGGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCTTGCACACTTTATATGCCCCAGTACAGGGGAACACCGGGGCCA  400

seq1  AGAAGAGAGAGTCGGTTGGTAGGGAAACAGAGTGGGTGGAATGTATAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAGAGTCGGTTGGTAGGGAAACAGAGTGGGTGGAATGTATAGGG  450

seq1  GAAATTCTGGATAGCATTTTGAATGTAAATAAAGAAAATGATAAAAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCTGGATAGCATTTTGAATGTAAATAAAGAAAATGATAAAAATTG  500

seq1  GGAAAAAAACATAGGATGAATTGAAACAATTGAGTTTTAGGAGTAACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAACATAGGATGAATTGAAACAATTGAGTTTTAGGAGTAACTCA  550

seq1  TTTTGCTTGGTTGTGGATTAAACAATGAGCACAATGAAAATCATTTGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTGGTTGTGGATTAAACAATGAGCACAATGAAAATCATTTGAGA  600

seq1  CTCAGAAAGCATTTAAGAAAGAAAATGGTTTTTATAGTGAATAAAACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAAGCATTTAAGAAAGAAAATGGTTTTTATAGTGAATAAAACTGA  650

seq1  GATGGAGTATTAGTGTGCCAATCAACAAATAAAAGAATAATGTGAAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGTATTAGTGTGCCAATCAACAAATAAAAGAATAATGTGAAGAAG  700

seq1  AGAGAGGAAAAAACAACAGAAAACTAATACAAACACTAAAAA-TTAAACT  749
      ||||||||||||||||||| |||||||||||||||||||||| |||||||
seq2  AGAGAGGAAAAAACAACAG-AAACTAATACAAACACTAAAAATTTAAACT  749

seq1  CTAAAGTGTATTACTAAGATTATAAGCCATAGTTTTCACTACATTTTCTG  799
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CT-AAGTGTATTACTAAGATTATAAGCCATAGTTTTCACTACATTTTCTG  798

seq1  ATCTAAATAGTTTAAATATTTCCATTTCT-GTGGTG--AGAGACTATAGT  846
      ||||||||||||||||||||||||||||| ||||||   |||||||||||
seq2  ATCTAAATAGTTTAAATATTTCCATTTCTGGTGGTGGAGGAGACTATAGT  848

seq1  AGAATAGAAAAAAATTG-CCTTA-TTGCA-TCTGTTGACTGTG-AAACAC  892
      || |||||||||||||| ||||| ||||| ||||||||||||| ||||||
seq2  AG-ATAGAAAAAAATTGCCCTTATTTGCATTCTGTTGACTGTGCAAACAC  897

seq1  -AAAAAATAAGTTG  905
       |||||||||||||
seq2  AAAAAAATAAGTTG  911


seq1: chr3_111479066_111480233
seq2: B6Ng01-283D15.g_66_1219 (reverse)

seq1  AGCAGTTCAGTAATTCA-GTTATG-CTGAATGACAATTTACCATTCAGAA  48
      ||||||||||| ||||| |||||| ||||  | |||  |||| ||||| |
seq2  AGCAGTTCAGT-ATTCAGGTTATGCCTGATGGCCAA--TACCCTTCAG-A  46

seq1  TGGATAGATGAAGTTCAGAAAGATAGCTGATTTAGGTTGCCATGCTGGCT  98
      | |||||||||   |||||||||||||||||||||  || ||||   |||
seq2  TTGATAGATGA--GTCAGAAAGATAGCTGATTTAG--TGGCATGGCTGCT  92

seq1  GAATCTTCTTCAATCCATTGGAACTTTGAAGCCCTTGCACAGCTTAAGAA  148
      ||||||||||||||||||  |||||||| ||||| |||||||||| ||||
seq2  GAATCTTCTTCAATCCAT--GAACTTTG-AGCCC-TGCACAGCTT-AGAA  137

seq1  GCTAGAAGTAAACTGAAATCCAGAAACACTCATAAATCTGAGAAATAGAA  198
      ||||| ||||||||| ||||||||||||||||| ||||||||||||||||
seq2  GCTAG-AGTAAACTG-AATCCAGAAACACTCAT-AATCTGAGAAATAGAA  184

seq1  ATAGAGATTCCAAATTTCACTGAATTCACAGAATATAGCAATAAAAACTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGATTCCAAATTTCACTGAATTCACAGAATATAGCAATAAAAACTG  234

seq1  AGTACATTGAAGTGTATTAAAATCTGAAGTTTAAAGCAAAAGTTTCGAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATTGAAGTGTATTAAAATCTGAAGTTTAAAGCAAAAGTTTCGAGA  284

seq1  CAGAGTTTCTCTGTATAGCTCTGGATGTACTGGAACTCACTTTGTAGACC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTTCTCTGTATAGCTCTGGATGTACTGGAACTCACTTTGTAGACC  334

seq1  AGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTG  384

seq1  GAATTAAAGGCGTGCGCCACCATTTTATACATTTTATCTTATGACTTTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAAGGCGTGCGCCACCATTTTATACATTTTATCTTATGACTTTTC  434

seq1  ATATAATGAATAATACAAGGATAAAAGAGATTGAATAAATGAATACCTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATGAATAATACAAGGATAAAAGAGATTGAATAAATGAATACCTTT  484

seq1  AGAGTAGTATATAGTAGTGAGTATCTCCAAGGAAAATAAATAATGAAACT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGTATATAGTAGTGAGTATCTCCAAGGAAAATAAATAATGAAACT  534

seq1  ACAGAATGTGTAGATCATGGAATTTTCTTCAGCTCTTAAAGAAAAAATGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATGTGTAGATCATGGAATTTTCTTCAGCTCTTAAAGAAAAAATGA  584

seq1  TACTACGGAATTTGAACAAAAATAGGTGGAGCTAGAAATTTTATAGTAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACGGAATTTGAACAAAAATAGGTGGAGCTAGAAATTTTATAGTAAA  634

seq1  CAAGATGACTGCCTAGACTAAAAGCAGATAAATATAGTACATTCACTTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGACTGCCTAGACTAAAAGCAGATAAATATAGTACATTCACTTTA  684

seq1  TGTCCTAATCCCAATGTTGATAGGCAGGCCAAAAAATAAAATAAAATAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAATCCCAATGTTGATAGGCAGGCCAAAAAATAAAATAAAATAAA  734

seq1  AAGGTTAAGAGTGTTTGTAAATATAAAATTAGGCACACCATGATTGACTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTAAGAGTGTTTGTAAATATAAAATTAGGCACACCATGATTGACTA  784

seq1  AGTAGTGGTAAAGAAAGACAAACCTTTGAGTCTACATGAAAAGGCAAATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTGGTAAAGAAAGACAAACCTTTGAGTCTACATGAAAAGGCAAATG  834

seq1  TGACTACAAATGGAGCTAGGGAACAATGGGAGAGATGAGAATTGGGGAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTACAAATGGAGCTAGGGAACAATGGGAGAGATGAGAATTGGGGAGA  884

seq1  ATGGCAGTGAGAGACAAAAACAAAAACAAAATAAAAAACAAACCACAAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGTGAGAGACAAAAACAAAAACAAAATAAAAAACAAACCACAAAG  934

seq1  AGAAATTTTGTTTAAAAATGCCGTGATAGAAGAAAATTCATGTTGAGGAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTTGTTTAAAAATGCCGTGATAGAAGAAAATTCATGTTGAGGAT  984

seq1  ATCTCCAAGAGATCATCTGACATTGCTCCTTCGGGATGATCCTCTCAAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAAGAGATCATCTGACATTGCTCCTTCGGGATGATCCTCTCAAAA  1034

seq1  ATTTGGTCTTATTACTTTGGCCGTTTCCAACACAGTCTTTGGTCAAATAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTCTTATTACTTTGGCCGTTTCCAACACAGTCTTTGGTCAAATAG  1084

seq1  ATAGATTTGCTTGGATATAGCATCGGAATCTTTCATTTCCCAGGGAATTA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTTGCTTGGATATAGCATCGGAATCTTTCATTTCCCAGGGAATTA  1134

seq1  GAAATTTTATGCATGAATTC  1168
      ||||||||||||||||||||
seq2  GAAATTTTATGCATGAATTC  1154


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