BAC Information

Click to search

BAC

Clone NameB6Ng01-284M08
Chromosome3 (Build37)
Map Location 13,467,439 - 13,468,122
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039798, EG668033, LOC668037, LOC100039823
Downstream geneLOC100039861, 0710005M24Rik, LOC100041679, LOC100041667, LOC100039882, EG622229, LOC668062
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284M08.bB6Ng01-284M08.g
ACCGA083391GA083392
length989684
definitionB6Ng01-284M08.b B6Ng01-284M08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaccagaggaataccaaatggcagagaagcacctgaaaaaaat
gttcaaaatctttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagttgaaaaattcaggtgacag
cagatgctgtcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctgaaaatcagtgtggcggttcctc
agaaaattggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgtcccaacctgtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacatgaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaaattatgaaattcctaggca
aatggatggacctggagggcatcatcctgagtgaagtaacccaatcacga
aggaactctcacaatatgtactcactgataagtggatattagcccagaaa
cttaggatacccaagatataagatacaatttgctatacacattaaactca
agagaacgaagaccaaagtgtggacacgttgccccttcttagaataggaa
acaaaacacccatggaaggagttacagagacaaaatttggaagagtgacg
aaaggatagaccatctagtgattgccatatccagagatccatcccataat
cagcttccaaacactgacaccattgcgtacactagcaagattttgctgaa
aggactagatatagctgtctcttgtgagactatgctggggcctagcaaac
acagaagtggatgctcacagtcagctattgaatggatcacagggccccca
atggaggagctagagaaagcacccaaggaactaaggaac
gaattctacgacaaagtgacttatgcactagaagcgtgggcacacaagtg
gcttcttcgtgcatacacttgagagggaacagaacaagtacaacaccatg
ttattacttattgattactgacctgtcagtcacccttttagtgtggatat
aagatgtgtcactttatatatttagacactgggacgtcttccaagataat
tccttagattttatccaatgaaaatgacaatgaaaatgaaaatgtggctg
tctgggagctaaacataggcatatgaaaaagttctaaatgttaagaatat
taagctaatttaaaaatgctttaatacaaattaagataagcaaatgagag
gccttcagggatcaaagacataggggaatttatatgaggcgaaacaaaat
gtgattgagaaagctcattaagaaaaccacccatcactcaatattttatt
ttattttttctgaggctttatttaagtgatattaagaaatgctatgggct
ggggttgtggtggtgtccacccttagcccattgcaaggcaaaggcaggtg
gatctctgtgtgcttgaggccagcctggtctaactagaaaattcaaggac
agcctagattatatagaggcgccctgtctcaaaacaaaagaggcagaggg
gaagagaaagggagaggaggggtgaggagaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_13467439_13468122
seq2: B6Ng01-284M08.g_69_752 (reverse)

seq1  CCATTCTCCTCACCCCTCCTCTCCCTTTCTCTTCCCCTCTGCCTCTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTCCTCACCCCTCCTCTCCCTTTCTCTTCCCCTCTGCCTCTTTTG  50

seq1  TTTTGAGACAGGGCGCCTCTATATAATCTAGGCTGTCCTTGAATTTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGACAGGGCGCCTCTATATAATCTAGGCTGTCCTTGAATTTTCTA  100

seq1  GTTAGACCAGGCTGGCCTCAAGCACACAGAGATCCACCTGCCTTTGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGACCAGGCTGGCCTCAAGCACACAGAGATCCACCTGCCTTTGCCTT  150

seq1  GCAATGGGCTAAGGGTGGACACCACCACAACCCCAGCCCATAGCATTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGGCTAAGGGTGGACACCACCACAACCCCAGCCCATAGCATTTCT  200

seq1  TAATATCACTTAAATAAAGCCTCAGAAAAAATAAAATAAAATATTGAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCACTTAAATAAAGCCTCAGAAAAAATAAAATAAAATATTGAGTG  250

seq1  ATGGGTGGTTTTCTTAATGAGCTTTCTCAATCACATTTTGTTTCGCCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGGTTTTCTTAATGAGCTTTCTCAATCACATTTTGTTTCGCCTCA  300

seq1  TATAAATTCCCCTATGTCTTTGATCCCTGAAGGCCTCTCATTTGCTTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTCCCCTATGTCTTTGATCCCTGAAGGCCTCTCATTTGCTTATC  350

seq1  TTAATTTGTATTAAAGCATTTTTAAATTAGCTTAATATTCTTAACATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTGTATTAAAGCATTTTTAAATTAGCTTAATATTCTTAACATTTA  400

seq1  GAACTTTTTCATATGCCTATGTTTAGCTCCCAGACAGCCACATTTTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTTTCATATGCCTATGTTTAGCTCCCAGACAGCCACATTTTCATT  450

seq1  TTCATTGTCATTTTCATTGGATAAAATCTAAGGAATTATCTTGGAAGACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGTCATTTTCATTGGATAAAATCTAAGGAATTATCTTGGAAGACG  500

seq1  TCCCAGTGTCTAAATATATAAAGTGACACATCTTATATCCACACTAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTGTCTAAATATATAAAGTGACACATCTTATATCCACACTAAAAG  550

seq1  GGTGACTGACAGGTCAGTAATCAATAAGTAATAACATGGTGTTGTACTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTGACAGGTCAGTAATCAATAAGTAATAACATGGTGTTGTACTTG  600

seq1  TTCTGTTCCCTCTCAAGTGTATGCACGAAGAAGCCACTTGTGTGCCCACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTCCCTCTCAAGTGTATGCACGAAGAAGCCACTTGTGTGCCCACG  650

seq1  CTTCTAGTGCATAAGTCACTTTGTCGTAGAATTC  684
      ||||||||||||||||||||||||||||||||||
seq2  CTTCTAGTGCATAAGTCACTTTGTCGTAGAATTC  684