BAC Information

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BAC

Clone NameB6Ng01-289L07
Chromosome3 (Build37)
Map Location 48,497,101 - 48,498,226
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666202, LOC666208, 1700018B24Rik
Downstream geneLOC100039404, EG666230, 4932443G14, LOC545519, LOC676568, LOC666247, LOC100039579, LOC100039587, LOC638779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289L07.bB6Ng01-289L07.g
ACCGA087032GA087033
length1,0601,131
definitionB6Ng01-289L07.b B6Ng01-289L07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggattccaccttcttaagttctttatatatattggatattagtccc
ctatctgatttatgataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgaaggtgtcttttaccttacagaaactttgcaatttta
tgaagtcccatttgtgaattctcaaatttacatcacaagccattgctgtt
ctattcaggaatttttccaagaacccagatgcccctcaacagaggaatgg
atatagaaagtgtggtacatttacacaatggagtatactattcagctatt
aaaaagaatgaatttataaaattcctaggcaaatggatggacctggaggg
tatcatcctgagtgaggtaacccaatcacaaaagaactcacatgatatgt
actcactgataagtggatattagcccagaaacttagaatactcaagatgt
aaaatacaatttgcaaaacacatgaaactcaagaacgaagaccaaagtgt
gtacactttgccccttcttataattgggaacaaaacacccatggaaggag
ttagagagataaagtttggagctgagacgaaaggatgcaccatctaaaga
ctgccatgcccgggaatccatcccataatcagcttccaaacgctgacact
attgcatacactagcaagattttgctgaaaggaccccgataaagctgtct
cttgtgaggctatgccagggcctaacaaacattgaagtggatgctcacag
tcaactattggatggatcacaggacccccaatggaggagctagagaaagt
acccaaggagttaaaggggtctgcaaccctataggtggaactggtacccc
ccagagctcgtgtctctagctacataagtatcagaagatagcctagttgg
tcatcagtggaaagagaggcccattgggtcttgcaactttatatgcctca
gtataggggaatgccagggccagaagtggggaggtggggtggggttaggg
ttagttggcg

tggaaacagttaaggctccagactgatacacctctgagaatgtttttctc
attctctgtaaagagatgaagctgtgttgctccatgtgatcttgtcgaca
tctgacaccatccattgagcttaggaagagagcgatgaaatgaacacacg
tgctctttattcagagaagcaaaagtcattgcttttctttcttcctgaag
tgttttctccagttttctgagtgtgtttctggatgaagtgagctaatttc
actacagctgaaacgtgctagtctcttgaccataaagagactatctagtg
tcattcgttgttagtggtatttccaaagtgtgaagggaaataactgtcag
acctttgtcatctacccataatataataacattacatgaaatatttgttc
ctagaattagcagaaaattctttgttggttgaaaaaaaataactactttt
tgtatttactatgcaagtcctaggagtgtccattcatggaaaggaatgtt
ctaatactgtggtcatgcatgtctttctaagccctaggatatcaagaaag
ccaaaactatgcagggacagagacacagaactcacatgggttaaaactca
caatattgcataattttaaatatctctaaatgtgcaggagttatattaag
ggaatgtaaaactaagtacttgatttaatatttttcagggttttttttgt
actttttaaattcaaaagacaaatggatctgactcagtcatctgaagaga
caaaaatcttttcactctatacagagaagaccaagaaatcatgctagaat
tgggtttctactctctacagctatggacacttaagaaatatatattattt
gtaagcatccatttatactttgatatagaaattgaaaatcccaataccca
tataggcagggtagttaaaataaaattaaataagattaagtggatcttac
attgtctaatggctctctgtaaacattctctaagaaaatggggatgtctt
aatctaacttccattggcttagcaatttggtaaattctcagctacttgcc
gccagaattataaagggtccgtattgaatattacttataaagttggaacc
tggaggctgacctaaggaaggctaccaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_48497101_48498226
seq2: B6Ng01-289L07.g_76_1206

seq1  TGGAAACAGTTAAGGCTCCAGACTGATACACCTCTGAGAATGTTTTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACAGTTAAGGCTCCAGACTGATACACCTCTGAGAATGTTTTTCTC  50

seq1  ATTCTCTGTAAAGAGATGAAGCTGTGTTGCTCCATGTGATCTTGTCGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTGTAAAGAGATGAAGCTGTGTTGCTCCATGTGATCTTGTCGACA  100

seq1  TCTGACACCATCCATTGAGCTTAGGAAGAGAGCGATGAAATGAACACACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACACCATCCATTGAGCTTAGGAAGAGAGCGATGAAATGAACACACG  150

seq1  TGCTCTTTATTCAGAGAAGCAAAAGTCATTGCTTTTCTTTCTTCCTGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTATTCAGAGAAGCAAAAGTCATTGCTTTTCTTTCTTCCTGAAG  200

seq1  TGTTTTCTCCAGTTTTCTGAGTGTGTTTCTGGATGAAGTGAGCTAATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTCCAGTTTTCTGAGTGTGTTTCTGGATGAAGTGAGCTAATTTC  250

seq1  ACTACAGCTGAAACGTGCTAGTCTCTTGACCATAAAGAGACTATCTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGCTGAAACGTGCTAGTCTCTTGACCATAAAGAGACTATCTAGTG  300

seq1  TCATTCGTTGTTAGTGGTATTTCCAAAGTGTGAAGGGAAATAACTGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCGTTGTTAGTGGTATTTCCAAAGTGTGAAGGGAAATAACTGTCAG  350

seq1  ACCTTTGTCATCTACCCATAATATAATAACATTACATGAAATATTTGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGTCATCTACCCATAATATAATAACATTACATGAAATATTTGTTC  400

seq1  CTAGAATTAGCAGAAAATTCTTTGTTGGTTGAAAAAAAATAACTACTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATTAGCAGAAAATTCTTTGTTGGTTGAAAAAAAATAACTACTTTT  450

seq1  TGTATTTACTATGCAAGTCCTAGGAGTGTCCATTCATGGAAAGGAATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTACTATGCAAGTCCTAGGAGTGTCCATTCATGGAAAGGAATGTT  500

seq1  CTAATACTGTGGTCATGCATGTCTTTCTAAGCCCTAGGATATCAAGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATACTGTGGTCATGCATGTCTTTCTAAGCCCTAGGATATCAAGAAAG  550

seq1  CCAAAACTATGCAGGGACAGAGACACAGAACTCACATGGGTTAAAACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACTATGCAGGGACAGAGACACAGAACTCACATGGGTTAAAACTCA  600

seq1  CAATATTGCATAATTTTAAATATCTCTAAATGTGCAGGAGTTATATTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTGCATAATTTTAAATATCTCTAAATGTGCAGGAGTTATATTAAG  650

seq1  GGAATGTAAAACTAAGTACTTGATTTAATATTTTTCAGGGTTTTTTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTAAAACTAAGTACTTGATTTAATATTTTTCAGGGTTTTTTTTGT  700

seq1  ACTTTTTAAATTCAAAAGACAAATGGATCTGACTCAGTCATCTGAAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTAAATTCAAAAGACAAATGGATCTGACTCAGTCATCTGAAGAGA  750

seq1  CAAAAATCTTTTCACTCTATACAGAGAAGACCAAGAAATCATGCTAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATCTTTTCACTCTATACAGAGAAGACCAAGAAATCATGCTAGAAT  800

seq1  T-GGTTTCTACTCTCTACAGCTATGGACACTTAAGAAATATATATTATTT  849
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTCTACTCTCTACAGCTATGGACACTTAAGAAATATATATTATTT  850

seq1  GTAAAGCATCCATTTATACTTTGATATAGAAATTGAAAATTCCCAATACC  899
      || |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GT-AAGCATCCATTTATACTTTGATATAGAAATTGAAAA-TCCCAATACC  898

seq1  CATATAAGCAGGGTAGTTAAAATAAAATTAAATAAGATTAAGT-GATCTT  948
      |||||| |||||||||||||||||||||||||||||||||||| ||||||
seq2  CATATAGGCAGGGTAGTTAAAATAAAATTAAATAAGATTAAGTGGATCTT  948

seq1  ACATTGTCT-ATTGCTCTCTGTAAACATTCTCT-AGAAA--TGGGATGTC  994
      ||||||||| || |||||||||||||||||||| |||||   ||||||||
seq2  ACATTGTCTAATGGCTCTCTGTAAACATTCTCTAAGAAAATGGGGATGTC  998

seq1  TT-ATCTAACTTTCCATT-GCTTAGCAATTTG--TAATTCTCCAGTTACT  1040
      || ||||||| ||||||| |||||||||||||   |||||| ||| ||||
seq2  TTAATCTAAC-TTCCATTGGCTTAGCAATTTGGTAAATTCT-CAGCTACT  1046

seq1  TGCGGCCAG-ATTAT-AAGGTTCCGTTATTTGAATATATAC-TATAAATT  1087
      ||| ||||| ||||| |||| |||||   |||||||| ||| |||||| |
seq2  TGCCGCCAGAATTATAAAGGGTCCGT--ATTGAATAT-TACTTATAAAGT  1093

seq1  TAGAAACTGGAGGCTGACATAAGGAAAGCTTACCAATGT  1126
      | ||| |||||||||||| ||||||| || |||||||||
seq2  TGGAACCTGGAGGCTGACCTAAGGAAGGC-TACCAATGT  1131


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