BAC Information

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BAC

Clone NameB6Ng01-291E07
Chromosome3 (Build37)
Map Location 66,003,875 - 66,004,386
singlet/doubletsinglet
Overlap geneVeph1
Upstream geneKcnab1, Ssr3, EG433604, EG667093, LOC100041083, 4931440P22Rik, Tiparp, LOC545530, LOC100040978, EG624866, Ccnl1, LOC625048, Tpi-rs2
Downstream genePtx3, LOC625115, Shox2, Rsrc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291E07.bB6Ng01-291E07.g
ACCGA088201GA088202
length5051,193
definitionB6Ng01-291E07.b B6Ng01-291E07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
acttgtgaactaaagaatgaatgagtacccaagagtactattaattaatg
atttgaatgctggattcttatttgaacttttgtttgaaaacatcatcctc
taattcatatatgggatatagttataacaagagaggaaaataatcaaatc
acattgttacatatatatgtaatatatatatatatatatatatatatata
tatatatatatttgagagagagagagaaagagaatcaatgaaaagtaagg
tgaggtctgggctctatagtacaatgctatcagggaaatagcattgtaca
aagataaatctatataaatataataaataaaaaaaagaaagaaacattaa
acaatggaggatgctctcgcacacacatgcgtgatggaaaaatgatatcg
cgatccagctagcgctgtgtgcgaacacgtgagaaataacgagtggaaga
cactgaccaatatccagaaagcatgtgttaaatacatggtcatctttgat
tccaa
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccaataccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaaggagctaaagggatctgcaaccct
atagtggaacacatatgagctaccagtacccggagctcttgactctagct
gcatatatatcaaagatgcctagtcgcatcactgtaaagaagagtcaatt
gacttgccacctttattggcccaagttacaggaattcaggctaacggcaa
ttgctgccagtgattgcgctgcactactcatctacgcactcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_66003875_66004386
seq2: B6Ng01-291E07.b_42_552 (reverse)

seq1  TTGGTATCATAGATGGCCATGTCTTTAACACATGCTTTCTGGATATTGGT  50
      |||| |||| ||||| |||||| |||||||||||||||||||||||||||
seq2  TTGGAATCAAAGATGACCATGTATTTAACACATGCTTTCTGGATATTGGT  50

seq1  CCGTGTCCTCACTTTGTCACTTTTCACTTGTTAGATACCAGGGATAAATT  100
      | ||||| ||   | || | || |||| |||| |    ||| | ||  | 
seq2  CAGTGTCTTCCACTCGTTATTTCTCACGTGTTCGCACACAGCGCTAGCTG  100

seq1  GTATAAGTTCTGAATTTTTCCATCCTCCATGTTAATATCATATCACCCTC  150
      |     | | |  |||||||||||   |||||   |   | | || ||||
seq2  GATCGCGATAT-CATTTTTCCATCACGCATGTGTGTGCGAGAGCATCCTC  149

seq1  CATTTTTAAATGATTCCTCCATTTATTGAATTACTATAATAAGAGAGATT  200
      |||| || |||| ||| | | ||| || | ||| |||| | | | |||||
seq2  CATTGTTTAATGTTTCTTTCTTTTTTTTATTTATTATATTTATATAGATT  199

seq1  GAACCTAGGACAATGCTATTTACCTGATAGCATTGTACTATTAGCCCCAG  250
       | | | | |||||||||||| |||||||||||||||||||    |||||
seq2  TATCTTTGTACAATGCTATTTCCCTGATAGCATTGTACTATAGAGCCCAG  249

seq1  ACCTCACCTTACTTTTCATTGATTCTCTTTCTCTCTCTCTCTCAAATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACCTTACTTTTCATTGATTCTCTTTCTCTCTCTCTCTCAAATATA  299

seq1  TATATATATATATATATATATATATATATATATATTACATATATATGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATATTACATATATATGTAA  349

seq1  CAATGTGATTTGATTATTTTCCTCTCTTGTTATAACTATATCCCATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGATTTGATTATTTTCCTCTCTTGTTATAACTATATCCCATATAT  399

seq1  GAATTAGAGGATGATGTTTTCAAACAAAAGTTCAAATAAGAATCCAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGAGGATGATGTTTTCAAACAAAAGTTCAAATAAGAATCCAGCAT  449

seq1  TCAAATCATTAATTAATAGTACTCTTGGGTACTCATTCATTCTTTAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCATTAATTAATAGTACTCTTGGGTACTCATTCATTCTTTAGTTC  499

seq1  ACAAGTGAATTC  512
      ||||||||||||
seq2  ACAAGTGAATTC  511