BAC Information

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BAC

Clone NameB6Ng01-295I22
Chromosome3 (Build37)
Map Location 6,111,102 - 6,112,236
singlet/doubletsinglet
Overlap genenone
Upstream geneZfhx4, Pxmp3, EG620382, EG667759, LOC100041165
Downstream geneLOC100041193, EG620570, LOC100041214, LOC383818, 1700008P02Rik, LOC100039349, Olfr289-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295I22.bB6Ng01-295I22.g
ACCGA091392GA091393
length1,2011,142
definitionB6Ng01-295I22.b B6Ng01-295I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctagccagagcaattagacaacaaaaggagatcaaggggataca
atttggaaaggaagaagtcaaaatatcactatttgcagatgatatgaccc
taaaaactccactagagaactcctaaagctgataaacaacttcctcaagt
ggcttgatataagattaacaaatcggtggcttctgtctacacagaggata
aacaggctgagaaagaaattagggaaacaacacccttcacaatagtcaca
aataatataaaataccttggcatgactctaactaagggagtgaaagatca
gcatgataagaatttccaagtctctgaagaaagaaatcaaagatctcaga
agatggaaagatcccccatgcacatagattgccaggattaatataataaa
aatggctttatttctgaaagtagtctgcagattcaatccaattcccatca
aaattccaaagcaattcttcaccaagttagaaagggcaatttgcaaatta
atctggaataacaaaaaacctaggttagcaaaaattactctcaacagtaa
aagaacctctggcagaatcaccatgcctgacctcaagctgcactacaaag
caattgtgataaaaactgcatggtactggtacaatgacagatagttagat
caatggaatagaatcgaagacccagaaatgaacccatacacctatggtca
cttgatctttgacaagggatctaaaacaacccagtggaaaaaaatacagc
attcaacaaatggtgctggcacaactggctgttatgtagaagaatgtgag
ttgatccattcttatctccttgtacaaagctcaagtctaagtagatcaag
gaactccacataaaaccagaaacactgaaacttatagaggagaaagtaag
gaagtgtctcaaagatatgggtacaggagaacagtttcctgacagaacag
caatggcttgtgctgttagatcaaaatttttattataagacaattgctta
agtattggaagaattgagtatgttgttctgtgtttttccttctttctaaa
cacatttcagtatttatcatagtctaaaatatacttatattaattttacg
aaactgggcttttgtatgtgaactttatatttcacctggaattgaatggt
tcgcagaatgaatttatatagaaggttttagagagagggatcctctcttt
c
gaattctaattttcttaccttaaatttgtgcatgtacccatcaaaatgaa
ttgtctgttgctagctttgtttatagccatgtgtacctgacatcttattt
attacaaaaagcagagaaaaattgtgataatagtctatagcacagtctga
aaagagtacttttgaatcatcactttgaccagtgtttctaatgataatgt
tatgactgtaaaccttctgcaactatgtgaatatttgctttgtatttatt
cagaaaatgttatatttttcacagatgagcttattacaaatgtttggaat
ttagttatttgtttatgtcagttcttgttatttgcatgtcttgaacatgg
agaaaattaatgagaaaaagtttgtatcaaattctcatatttggaaaata
tttcacaggatttttttttaagattgtggataaatatttgaaagctgaat
tgtttggggtaaatatctttttaattactattcagtattctttttactca
tctgcattttttaaaaaatctttttgtgaaaatcttaacattaaatgaaa
taatacaaaggcaaattttaaatactttatgttaatagatgaacaaatgg
aattcaaacatgatgaaatagtaagaggcattaagttgaaaaacacagca
caatatatatcctctaaatttcagtctgtttcagctaatttgggaagata
gttgtcttaataggactgataattactatagattttagtaataaacattt
atagatttgatttagaaattatttcaaccatgtaatgctcataatttatt
tcttcaccaattcaaattcaggaccgaatgaaaaggtctcttttgcttgg
gatttcttttctcatttacaaatatgctttatgatcccctggcttgtcat
tatttcctattcatcttgatttagtatatgcaatgaaactcaactctata
tgtgaaagcagccctttgatttccagtatttatcatattatatagcacat
gaacatttcaggttacttatattatagatgactatcttatattttatatc
acaggttagatgttttaacgagggaaaatattcttaggacttaccttcct
ttggatgcatattatgggaaggaaagtggatatataatgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_6111102_6112236
seq2: B6Ng01-295I22.g_66_1207

seq1  GAATTCTAATTTTCTTACCTTAAATTTGTGCATGTACCCATCAAAATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTTTCTTACCTTAAATTTGTGCATGTACCCATCAAAATGAA  50

seq1  TTGTCTGTTGCTAGCTTTGTTTATAGCCATGTGTACCTGACATCTTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGTTGCTAGCTTTGTTTATAGCCATGTGTACCTGACATCTTATTT  100

seq1  ATTACAAAAAGCAGAGAAAAATTGTGATAATAGTCTATAGCACAGTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAAAAGCAGAGAAAAATTGTGATAATAGTCTATAGCACAGTCTGA  150

seq1  AAAGAGTACTTTTGAATCATCACTTTGACCAGTGTTTCTAATGATAATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTACTTTTGAATCATCACTTTGACCAGTGTTTCTAATGATAATGT  200

seq1  TATGACTGTAAACCTTCTGCAACTATGTGAATATTTGCTTTGTATTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTGTAAACCTTCTGCAACTATGTGAATATTTGCTTTGTATTTATT  250

seq1  CAGAAAATGTTATATTTTTCACAGATGAGCTTATTACAAATGTTTGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATGTTATATTTTTCACAGATGAGCTTATTACAAATGTTTGGAAT  300

seq1  TTAGTTATTTGTTTATGTCAGTTCTTGTTATTTGCATGTCTTGAACATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTATTTGTTTATGTCAGTTCTTGTTATTTGCATGTCTTGAACATGG  350

seq1  AGAAAATTAATGAGAAAAAGTTTGTATCAAATTCTCATATTTGGAAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTAATGAGAAAAAGTTTGTATCAAATTCTCATATTTGGAAAATA  400

seq1  TTTCACAGGATTTTTTTTTAAGATTGTGGATAAATATTTGAAAGCTGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGGATTTTTTTTTAAGATTGTGGATAAATATTTGAAAGCTGAAT  450

seq1  TGTTTGGGGTAAATATCTTTTTAATTACTATTCAGTATTCTTTTTACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGGGTAAATATCTTTTTAATTACTATTCAGTATTCTTTTTACTCA  500

seq1  TCTGCATTTTTTAAAAAATCTTTTTGTGAAAATCTTAACATTAAATGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATTTTTTAAAAAATCTTTTTGTGAAAATCTTAACATTAAATGAAA  550

seq1  TAATACAAAGGCAAATTTTAAATACTTTATGTTAATAGATGAACAAATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACAAAGGCAAATTTTAAATACTTTATGTTAATAGATGAACAAATGG  600

seq1  AATTCAAACATGATGAAATAGTAAGAGGCATTAAGTTGAAAAACACAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAACATGATGAAATAGTAAGAGGCATTAAGTTGAAAAACACAGCA  650

seq1  CAATATATATCCTCTAAATTTCAGTCTGTTTCAGCTAATTTGGGAAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATATATCCTCTAAATTTCAGTCTGTTTCAGCTAATTTGGGAAGATA  700

seq1  GTTGTCTTAATAGGACTGATAATTACTATAGATTTTAGTAATAAACATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTTAATAGGACTGATAATTACTATAGATTTTAGTAATAAACATTT  750

seq1  ATAGATTTGATTTAGAAATTATTTCAACCATGTAATGCTCATAATTTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTTGATTTAGAAATTATTTCAACCATGTAATGCTCATAATTTATT  800

seq1  TCTTCACCAATTCAAATTCAGGACCGAATG-AAAGGTCTCTTTTGCTTGG  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTTCACCAATTCAAATTCAGGACCGAATGAAAAGGTCTCTTTTGCTTGG  850

seq1  GATTTCTTTTCTCATTTACAAATATGCTTTATGATCCCCTGGCTTGTCAA  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GATTTCTTTTCTCATTTACAAATATGCTTTATGATCCCCTGGCTTGTC-A  899

seq1  TTATTTCCTATTCATCTTGATTTAGTATATGCAATGAAACTCAAACTCTA  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTATTTCCTATTCATCTTGATTTAGTATATGCAATGAAACTC-AACTCTA  948

seq1  TATGTGAAAGCAGCCCTTTGATTTCCAGTATTTATCAATATTATATAGCA  999
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TATGTGAAAGCAGCCCTTTGATTTCCAGTATTTATC-ATATTATATAGCA  997

seq1  CATTGAAACATTTCA-GTTACTTATA-TATAGATGACTATCTTATA-TTT  1046
      |||   ||||||||| |||||||||| ||||||||||||||||||| |||
seq2  CAT--GAACATTTCAGGTTACTTATATTATAGATGACTATCTTATATTTT  1045

seq1  ATATCACAGGTTAGATGTTTT-ACGAGGAAAAATAT--CTAGAAATTA-C  1092
      ||||||||||||||||||||| |||||| |||||||   ||| | ||| |
seq2  ATATCACAGGTTAGATGTTTTAACGAGGGAAAATATTCTTAGGACTTACC  1095

seq1  TTCTTTTGAATGCATATAAT--GAAGAAAA--TGATATATAATGATT  1135
      ||| |||| |||||||| ||  |||| |||   ||||||||||||||
seq2  TTCCTTTGGATGCATATTATGGGAAGGAAAGTGGATATATAATGATT  1142