BAC Information

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BAC

Clone NameB6Ng01-299F19
Chromosome3 (Build37)
Map Location 148,234,346 - 148,235,337
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100040354, Lphn2, LOC100040368, LOC668893, EG381483
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299F19.bB6Ng01-299F19.g
ACCGA094223GA094224
length945993
definitionB6Ng01-299F19.b B6Ng01-299F19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctttgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggcattgcagaaattactgccac
tatcaaggacttgaaagacgcaggggtggtggttcccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtactttcgttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttcttaggagtccagtggtgtggggcatgcagagatattccttctaaggt
gaaagataagttattgcacctgggcccctcctacaaccaagaaagaagca
caacgtttagtggggtctatttggaattctggagacacacatccctcact
tgggtgtgtaacttatgcctatttaccaagtgactcggaaagctgctagc
tttgtgtgggggcctgtaacagcgagaatgcccctttaaacaggt
gaattcagtccttttctagctccatttgaatcaagacataaaactctcag
ctcctgcgtgcctgcaggctgtcatgcttcctgccatgatgataatggac
tgaacctctgaacctataagccagccccaattaagtgttattgtccttta
taagagttaccttggtcatggtgtctcctcacagcaataaaatcctagct
aagacaggaagagagagtttatttttgttttaccgttctggggggttcac
agtggcaggagcttaagattggtggtccatcgtgcatccacgatgaagga
gcagagaacaaggaagggatgccaatgccctgtttactttctccatttta
cacaattcaggatctccttacagggaaattggaccatcaacagtgaaatt
ggaccatctcacatcaattgatatgatcaatatgatcatccacacacatt
cccagctgtcccatctcagttaactctggatttcatcaagttgatagtac
taacacatccaccctgtgccttccctaaataaccctaggctggccacttc
tttataagctaacgtgtcccatctatttacgaaacccatggttaccagca
ctcaccatctgaagactcatcattacggaggatacaaagaggtgattcca
tgtagagagtggagagctttctagccaagttgactggggaaggcaataag
cctggtttcatgagatgcttagcaatgcagaccagctgccatgatcgttc
ctttccagttgtgattgagatactttagtgcagtccagttgctagagaat
ctcctctcctaatgagtgactgaaactggaaaataagagcacctttgagt
gccacagagcagaaacccatgcacaagaatgggcatctctaaatggcctt
tccgtaatatatttccttttaattttatttgttaatagacaaggaggacc
tgcatttcattagcggtctggtagccgagtgcatagcctcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_148234346_148235337
seq2: B6Ng01-299F19.g_79_1060

seq1  TTTTCTAGCTCCATTTGAATCAAGACATAAAACTCTCAGCTCCTGCGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAGCTCCATTTGAATCAAGACATAAAACTCTCAGCTCCTGCGTGC  50

seq1  CTGCAGGCTGTCATGCTTCCTGCCATGATGATAATGGACTGAACCTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGCTGTCATGCTTCCTGCCATGATGATAATGGACTGAACCTCTGA  100

seq1  ACCTATAAGCCAGCCCCAATTAAGTGTTATTGTCCTTTATAAGAGTTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATAAGCCAGCCCCAATTAAGTGTTATTGTCCTTTATAAGAGTTACC  150

seq1  TTGGTCATGGTGTCTCCTCACAGCAATAAAATCCTAGCTAAGACAGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATGGTGTCTCCTCACAGCAATAAAATCCTAGCTAAGACAGGAAG  200

seq1  AGAGAGTTTATTTTTGTTTTACCGTTCTGGGGGGTTCACAGTGGCAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTTTATTTTTGTTTTACCGTTCTGGGGGGTTCACAGTGGCAGGAG  250

seq1  CTTAAGATTGGTGGTCCATCGTGCATCCACGATGAAGGAGCAGAGAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGATTGGTGGTCCATCGTGCATCCACGATGAAGGAGCAGAGAACAA  300

seq1  GGAAGGGATGCCAATGCCCTGTTTACTTTCTCCATTTTACACAATTCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGATGCCAATGCCCTGTTTACTTTCTCCATTTTACACAATTCAGG  350

seq1  ATCTCCTTACAGGGAAATTGGACCATCAACAGTGAAATTGGACCATCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTTACAGGGAAATTGGACCATCAACAGTGAAATTGGACCATCTCA  400

seq1  CATCAATTGATATGATCAATATGATCATCCACACACATTCCCAGCTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATTGATATGATCAATATGATCATCCACACACATTCCCAGCTGTCC  450

seq1  CATCTCAGTTAACTCTGGATTTCATCAAGTTGATAGTACTAACACATCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGTTAACTCTGGATTTCATCAAGTTGATAGTACTAACACATCCA  500

seq1  CCCTGTGCCTTCCCTAAATAACCCTAGGCTGGCCACTTCTTTATAAGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGCCTTCCCTAAATAACCCTAGGCTGGCCACTTCTTTATAAGCTA  550

seq1  ACGTGTCCCATCTATTTACGAAACCCATGGTTACCAGCACTCACCATCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTCCCATCTATTTACGAAACCCATGGTTACCAGCACTCACCATCTG  600

seq1  AAGACTCATCATTACGGAGGATACAAAGAGGTGATTCCATGTAGAGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCATCATTACGGAGGATACAAAGAGGTGATTCCATGTAGAGAGTG  650

seq1  GAGAGCTTTCTAGCCAAGTTGACTGGGGAAGGCAATAAGCCTGGTTTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTTTCTAGCCAAGTTGACTGGGGAAGGCAATAAGCCTGGTTTCAT  700

seq1  GAGATGCTTAGCAATGCAGACCAGCTGCCATGATCGTTCCTTTCCAGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGCTTAGCAATGCAGACCAGCTGCCATGATCGTTCCTTTCCAGTTG  750

seq1  TGATTGAGATACTTTAGTGCAGTCCAGTTGCTAGAGAATCT-CTCTCCTA  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGATTGAGATACTTTAGTGCAGTCCAGTTGCTAGAGAATCTCCTCTCCTA  800

seq1  ATGAGTGACTGAAACTGG-AAATAAGAGCACCTTTGAGTGGCCACAAGAG  848
      |||||||||||||||||| |||||||||||||||||||| ||||| ||||
seq2  ATGAGTGACTGAAACTGGAAAATAAGAGCACCTTTGAGT-GCCAC-AGAG  848

seq1  CAGAAACCCATGCACAAGATGGGGCATCTCTAAAATTGGCCTTTCCGTTA  898
      |||||||||||||||||||  |||||||||||||  |||||||||||| |
seq2  CAGAAACCCATGCACAAGAATGGGCATCTCTAAA--TGGCCTTTCCGTAA  896

seq1  TATATTTCCTTTTTAAATTTTTATTTGTTATTTAGACAA-GAGGACCCTG  947
      |||||||||||||   | ||||||||||||  ||||||| |||||||   
seq2  TATATTTCCTTTT---AATTTTATTTGTTA-ATAGACAAGGAGGACC--T  940

seq1  GCATTTCTATTAGCGGCCTTGTAGCCAGAGTGGCATAGCCTCTTT  992
      ||||||| |||||||| || |||||| |||| |||||||||||||
seq2  GCATTTC-ATTAGCGGTCTGGTAGCC-GAGT-GCATAGCCTCTTT  982