BAC Information

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BAC

Clone NameB6Ng01-302B19
Chromosome3 (Build37)
Map Location 85,209,810 - 85,332,448
singlet/doubletdoublet
Overlap genenone
Upstream gene6330505N24Rik, Arfip1, EG667788, EG627369, Tigd4, Tmem154, LOC624889, Fbxw7, Dear1
Downstream geneLOC100042237, LOC100042125, Pet112l, 9930021J17Rik, Glt28d2, LOC100042265, Gm1019, Sh3d19, Rps3a, LOC634201, Lrba
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302B19.bB6Ng01-302B19.g
ACCGA096249GA096250
length1,120621
definitionB6Ng01-302B19.b B6Ng01-302B19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,209,810 - 85,210,936)(85,331,828 - 85,332,448)
sequence
gaattcattagctgccattgccaactgtaggtgttttctctgagccaggc
aggctccccaggatctctgcaggtcaccgggtcaacaacttaacatgcgg
aatctgcaaatgccctggtctggagcacaggccaggcaggcacaatggag
ctgcttcttctggctcagtggtctggcttcccatcagggaccaagctgaa
aagtacctgccacatcttgcagatgaatcctggggcccacctggcagatt
gcaaaccaaagacagagctagaaacctaaatctctctcctgggtgtctgg
caggctccctctccagcttgacttgaaagaagggcttttctttccttttt
ttgatttttttctttcattcccttttctctttgtggcatttgtattccca
taagaattagtaagtagatatgtatttgtaaagtaatgggtaaagatgat
aactgggtttttaaaatgtaatttctgatgttccaacttttatttaactc
agcaatgacagttatactgacagccacacttattcctgatctagagaaat
cgtctttgcctaataccacattaagcactatttgcaaagcagcatccttg
gatggcttctgccaccatgttcagggcctttgctacccaacctctggagg
ggctgccaacattttaagcaacgtcggctcttcatgataggattccatct
ggggcagagagatgtctcagagctggcacaagaggctgtctttctcagat
aaatggccctaaagatgacaggatcatcccgggctgactatcacagcaca
catcctgggaacaggcttactccaatctgaaaaaggctattgaatgagcc
tctttaattgccacccgccctctgccttacaacttacttattaaggtgtt
tggcactcgctgacggtggagattttcctgcaaggttcttttggagctac
ctagttgactttggcacaaaagtgacatataataacatcaggattatatt
attattggactagttctcattctgtgtaactggaattctaatgctcaact
tgcttgttataatactgttcctttcatcccttcagaagccatgaaggcaa
agcgaagagggcttgtgtga
gaattcaaagttccagtccaataagccaattaattgtctgaacccctctg
accacctataacaaagcctctcatgtcagggttctcagaaacacactatg
ctgttccttctgtcaccaagctgtccttctgcccccaggccacaacaggc
tgcttcctgttactctaccctgattgggccccttgcatgcctttcacaca
tatccattctttttaggtgacactaggaccttggtaggttcttttgagct
cagccactaactctgctaatggcttaaggcctgggatgttctggctgcat
cttaaccatgaacttttcagtttgaagcccaaagtattagaatttagcct
acacgggtaggctgattgatgttggggaggtgagtctgtctggggggagg
gttctaatcataccaggtaactattgtatccctccagtgaaatggtgcag
tgccctgctggtgttgtgggactgtgtaactctctctacttctgttcagt
cagatagaatgtcacttcctccacacaatcttcctttattaaaaagtagg
ttgcactgtgtgatggcactctctctctcaagtatgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_85209810_85210936
seq2: B6Ng01-302B19.b_50_1169

seq1  GAATTCATTAGCTGCCATTGCCAACTGTAGGTGTTTTCTCTGAGCCAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGCTGCCATTGCCAACTGTAGGTGTTTTCTCTGAGCCAGGC  50

seq1  AGGCTCCCCAGGATCTCTGCAGGTCACCGGGTCAACAACTTAACATGCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCCCAGGATCTCTGCAGGTCACCGGGTCAACAACTTAACATGCGG  100

seq1  AATCTGCAAATGCCCTGGTCTGGAGCACAGGCCAGGCAGGCACAATGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCAAATGCCCTGGTCTGGAGCACAGGCCAGGCAGGCACAATGGAG  150

seq1  CTGCTTCTTCTGGCTCAGTGGTCTGGCTTCCCATCAGGGACCAAGCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTTCTGGCTCAGTGGTCTGGCTTCCCATCAGGGACCAAGCTGAA  200

seq1  AAGTACCTGCCACATCTTGCAGATGAATCCTGGGGCCCACCTGGCAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCTGCCACATCTTGCAGATGAATCCTGGGGCCCACCTGGCAGATT  250

seq1  GCAAACCAAAGACAGAGCTAGAAACCTAAATCTCTCTCCTGGGTGTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCAAAGACAGAGCTAGAAACCTAAATCTCTCTCCTGGGTGTCTGG  300

seq1  CAGGCTCCCTCTCCAGCTTGACTTGAAAGAAGGGCTTTTCTTTCCTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCCCTCTCCAGCTTGACTTGAAAGAAGGGCTTTTCTTTCCTTTTT  350

seq1  TTGATTTTTTTCTTTCATTCCCTTTTCTCTTTGTGGCATTTGTATTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTTTTCTTTCATTCCCTTTTCTCTTTGTGGCATTTGTATTCCCA  400

seq1  TAAGAATTAGTAAGTAGATATGTATTTGTAAAGTAATGGGTAAAGATGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATTAGTAAGTAGATATGTATTTGTAAAGTAATGGGTAAAGATGAT  450

seq1  AACTGGGTTTTTAAAATGTAATTTCTGATGTTCCAACTTTTATTTAACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGTTTTTAAAATGTAATTTCTGATGTTCCAACTTTTATTTAACTC  500

seq1  AGCAATGACAGTTATACTGACAGCCACACTTATTCCTGATCTAGAGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGACAGTTATACTGACAGCCACACTTATTCCTGATCTAGAGAAAT  550

seq1  CGTCTTTGCCTAATACCACATTAAGCACTATTTGCAAAGCAGCATCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTTGCCTAATACCACATTAAGCACTATTTGCAAAGCAGCATCCTTG  600

seq1  GATGGCTTCTGCCACCATGTTCAGGGCCTTTGCTACCCAACCTCTGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTTCTGCCACCATGTTCAGGGCCTTTGCTACCCAACCTCTGGAGG  650

seq1  GGCTGCCAACATTTTAAGCAACGTCGGCTCTTCATGATAGGATTCCATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCAACATTTTAAGCAACGTCGGCTCTTCATGATAGGATTCCATCT  700

seq1  GGGGCAGAGAGATGTCTCAGAGCTGGCACAAGAGGCTGTCTTTCTCAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGAGAGATGTCTCAGAGCTGGCACAAGAGGCTGTCTTTCTCAGAT  750

seq1  AAATGGCCCTAAAGATGACAGGATCATCCCGGGCTGACTATCACAGCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCCCTAAAGATGACAGGATCATCCCGGGCTGACTATCACAGCACA  800

seq1  CATCCTGGGAACAGGCTTACTCCAATCTGAAAAAGGCTATTGAATGAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGGGAACAGGCTTACTCCAATCTGAAAAAGGCTATTGAATGAGCC  850

seq1  TCTTTAATTGCCACCCGCCCTCTGCCTTACAACTTACTTATTAAGGTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAATTGCCACCCGCCCTCTGCCTTACAACTTACTTATTAAGGTGTT  900

seq1  TGGCACTCGCTGACGGTGGAGATTTTCCTGCAAGGTTCTTTTGGGAGCTA  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGGCACTCGCTGACGGTGGAGATTTTCCTGCAAGGTTCTTTT-GGAGCTA  949

seq1  CCTAGGTGACTTTGGCACAAAAGTGACATATAAATAACATCAGGGATTAT  1000
      ||||| ||||||||||||||||||||||||| |||||||||| |||||| 
seq2  CCTAGTTGACTTTGGCACAAAAGTGACATAT-AATAACATCA-GGATTA-  996

seq1  TATTATTATTGGACTAGGTTCTCATTCTGTGTAACTGGGAATTCTAATGC  1050
      |||||||||||||||| ||||||||||||||||||| |||||||||||||
seq2  TATTATTATTGGACTA-GTTCTCATTCTGTGTAACT-GGAATTCTAATGC  1044

seq1  TCCAACTTGCTTGTTATAAATACTGTTCCCTTCATCCCTTCAGGAAGCAT  1100
      | ||||||||||||||| ||||||||||| ||||||||||||| |  |||
seq2  T-CAACTTGCTTGTTAT-AATACTGTTCCTTTCATCCCTTCAGAAGCCAT  1092

seq1  GAAAGCAAGGCGGAGAGGGC-TGTGTGA  1127
      ||| |||| ||| ||||||| |||||||
seq2  GAAGGCAAAGCGAAGAGGGCTTGTGTGA  1120

seq1: chr3_85331828_85332448
seq2: B6Ng01-302B19.g_66_686 (reverse)

seq1  TCACACACACACACACACACACACACACACACACACATACTTGAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACACACACACACACACACACACACACACACATACTTGAGAGAGA  50

seq1  GAGTGCCATCACACAGTGCAACCTACTTTTTAATAAAGGAAGATTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCCATCACACAGTGCAACCTACTTTTTAATAAAGGAAGATTGTGTG  100

seq1  GAGGAAGTGACATTCTATCTGACTGAACAGAAGTAGAGAGAGTTACACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGTGACATTCTATCTGACTGAACAGAAGTAGAGAGAGTTACACAG  150

seq1  TCCCACAACACCAGCAGGGCACTGCACCATTTCACTGGAGGGATACAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACAACACCAGCAGGGCACTGCACCATTTCACTGGAGGGATACAATA  200

seq1  GTTACCTGGTATGATTAGAACCCTCCCCCCAGACAGACTCACCTCCCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCTGGTATGATTAGAACCCTCCCCCCAGACAGACTCACCTCCCCAA  250

seq1  CATCAATCAGCCTACCCGTGTAGGCTAAATTCTAATACTTTGGGCTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATCAGCCTACCCGTGTAGGCTAAATTCTAATACTTTGGGCTTCAA  300

seq1  ACTGAAAAGTTCATGGTTAAGATGCAGCCAGAACATCCCAGGCCTTAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAAAGTTCATGGTTAAGATGCAGCCAGAACATCCCAGGCCTTAAGC  350

seq1  CATTAGCAGAGTTAGTGGCTGAGCTCAAAAGAACCTACCAAGGTCCTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCAGAGTTAGTGGCTGAGCTCAAAAGAACCTACCAAGGTCCTAGT  400

seq1  GTCACCTAAAAAGAATGGATATGTGTGAAAGGCATGCAAGGGGCCCAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTAAAAAGAATGGATATGTGTGAAAGGCATGCAAGGGGCCCAATC  450

seq1  AGGGTAGAGTAACAGGAAGCAGCCTGTTGTGGCCTGGGGGCAGAAGGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGAGTAACAGGAAGCAGCCTGTTGTGGCCTGGGGGCAGAAGGACA  500

seq1  GCTTGGTGACAGAAGGAACAGCATAGTGTGTTTCTGAGAACCCTGACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTGACAGAAGGAACAGCATAGTGTGTTTCTGAGAACCCTGACATG  550

seq1  AGAGGCTTTGTTATAGGTGGTCAGAGGGGTTCAGACAATTAATTGGCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTTTGTTATAGGTGGTCAGAGGGGTTCAGACAATTAATTGGCTTA  600

seq1  TTGGACTGGAACTTTGAATTC  621
      |||||||||||||||||||||
seq2  TTGGACTGGAACTTTGAATTC  621