BAC Information

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BAC

Clone NameB6Ng01-302M18
Chromosome3 (Build37)
Map Location 150,362,209 - 150,455,660
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040620, LOC100040633, LOC100040455, LOC100040463, LOC623554
Downstream geneEltd1, Ifi44, H28
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302M18.bB6Ng01-302M18.g
ACCGA096756GA096757
length1,1121,106
definitionB6Ng01-302M18.b B6Ng01-302M18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,454,540 - 150,455,660)(150,362,209 - 150,363,324)
sequence
gaattctttatgatttgtaataagtatgagaacaaaaaggaggattaaac
attgattctcagtaaatggaaaggattggtgttttctttggcatagaaac
ttgctgagaagctcaagctagacctgcacattttaaaacgataattgctg
tcttgaaaacacacacggtggtaggcttaaaatgaaggcttgtagatgaa
aaatacattgagaaaatcactcctctggaataccatctttgaaatatgtg
aataagaaatgcacacttttcaataagaattgctgatgtggtgacaccat
agttcctacgaagtggttcattttactctattcaggatacagcttgattc
atcatgaagtgttctgaggccttttcagaatgaaggttgggaacagctga
atgatcactccataaacacatatccaacccaggaagaaataatttacctt
cacaaagccttatttccttttggagggagtatgattaagtcatatcaaat
atgtcctgactcaaagttattctaacgatcatgtagtaaattctgtaagt
ttcttgacagtttaataaacacttacaaagtggctttcttaatcagtcaa
ggatattatgacttgatgatatttatttcttctaaataagggtatgggag
tgtctgggtactgaactaggtatttgagttgaaaataatatgaaccatac
actttcaaacatcttaaaatttgcattacatgtcttagttactgctctat
tgctgtgaaaagacagcaggacaagtaaaacttataaaaacttacaaaag
acagtaatttatgtgggtttgcttataatttcagaaggtaagtctataac
cgtcatggcaggaggcacagcagcaggtggacaggcagaagttattcagg
agcagcagctaagtggttatttgctacacatgcacaaggcagagtgcaaa
accagacctaggatgggcttttgaaacttcaaacgccatcacgagtgaga
cttttcttcacatgttcacactgcctaatcattcttcacagttcacacta
ggaccaaacattgaaataaatgagctacggcgcattctactcagacacca
cacagcctttat

gaattcttaagattcttctcctcttcaatgtttacattgtctactttcac
tttggtaacttttcaaaatgaaattttttacacattatacattttagaaa
aattttgattcaaaaggctaggtcgtataggaaaaaacaaaccaggcaga
cttcatccttgtcccctgcctcccaggttctctccgattcatctttgtct
cctgcatcccaggtttttcttggagcaaacagtaatacaagctattcaaa
actgtttcgttcacttaaaagtggaccagtgtaatatatcctttctatgt
aggtttactttagtaagtagttacattatattttgttcaaactatacagt
agaattctgattggcattctgctctggaccccacggcactggttaaagta
attaccctataagaaaagccagaaatggtcctcaaataagaggtgcaaaa
caggcataaccaagtattgactccttaagccagggcctcagcctgaggtg
tcagcccccagtcagtgtcctcagaacctctgtgaataagagtacataga
tcacattcctgcattagatgtgagctcttgtgggacaagaagtcaaattt
cagcttagctcttgaaaaatagaagtatatatacactctgaaggcataaa
tgaatattttttgctcactgaattttttttttcaggactgtcagcaagac
ccacttaataatgtcataatatttccacatagatttcatctttgcagtgc
agagctttcccatgtgttaatgtatttggttttgaaactattcttatttc
tttaaatcatagtaagcagaccaagttccatggacttgaggtagaaaaaa
ttgtagtgtttatttgcctcaagtatatgtagctgttattaaaactttgg
tcctgaaaggaaatcctgtcctttgttgccatagcaaagacataaggaga
aggaaagactacataatatttatctaagtcataacatagatgtcgctatc
atttgaggaagtgcaccctgactatgacacttttagatattccggacagt
catgtgagaacaagccatgcagaaacctgggtgtttaattagcatctaca
gcaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150454540_150455660
seq2: B6Ng01-302M18.b_47_1158 (reverse)

seq1  ATAAA-GCTGTGTGGTGTCTTGAGTAAGAATGGCGCCCGTAGGCTCATTT  49
      ||||| ||||||||||||| ||||| ||||| ||| ||||| ||||||||
seq2  ATAAAGGCTGTGTGGTGTC-TGAGT-AGAAT-GCG-CCGTA-GCTCATTT  45

seq1  ATTTCAATGTTTGGTTCCTAGTTGGTGGAACTGTTGAAGAATGATTAGGC  99
      |||||||||||||| |||||||  || |||||| ||||||||||||||||
seq2  ATTTCAATGTTTGG-TCCTAGT--GT-GAACTG-TGAAGAATGATTAGGC  90

seq1  AGTGTGAACATGTGGAAGAAAGTCTCACTCGTGATGGCGTTTGAAGTTTC  149
      |||||||||||||| |  ||||||||||||||||||||||||||||||||
seq2  AGTGTGAACATGTGAAGAAAAGTCTCACTCGTGATGGCGTTTGAAGTTTC  140

seq1  AAAAGCCCATCCTAGGTCTGGTTTTGCACTCTGCCTTGTGCATGTGTAGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCCATCCTAGGTCTGGTTTTGCACTCTGCCTTGTGCATGTGTAGC  190

seq1  AAATAACCACTTAGCTGCTGCTCCTGAATAACTTCTGCCTGTCCACCTGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACCACTTAGCTGCTGCTCCTGAATAACTTCTGCCTGTCCACCTGC  240

seq1  TGCTGTGCCTCCTGCCATGACGGTTATAGACTTACCTTCTGAAATTATAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGCCTCCTGCCATGACGGTTATAGACTTACCTTCTGAAATTATAA  290

seq1  GCAAACCCACATAAATTACTGTCTTTTGTAAGTTTTTATAAGTTTTACTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCCACATAAATTACTGTCTTTTGTAAGTTTTTATAAGTTTTACTT  340

seq1  GTCCTGCTGTCTTTTCACAGCAATAGAGCAGTAACTAAGACATGTAATGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGCTGTCTTTTCACAGCAATAGAGCAGTAACTAAGACATGTAATGC  390

seq1  AAATTTTAAGATGTTTGAAAGTGTATGGTTCATATTATTTTCAACTCAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAAGATGTTTGAAAGTGTATGGTTCATATTATTTTCAACTCAAA  440

seq1  TACCTAGTTCAGTACCCAGACACTCCCATACCCTTATTTAGAAGAAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGTTCAGTACCCAGACACTCCCATACCCTTATTTAGAAGAAATAA  490

seq1  ATATCATCAAGTCATAATATCCTTGACTGATTAAGAAAGCCACTTTGTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATCAAGTCATAATATCCTTGACTGATTAAGAAAGCCACTTTGTAA  540

seq1  GTGTTTATTAAACTGTCAAGAAACTTACAGAATTTACTACATGATCGTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTATTAAACTGTCAAGAAACTTACAGAATTTACTACATGATCGTTA  590

seq1  GAATAACTTTGAGTCAGGACATATTTGATATGACTTAATCATACTCCCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACTTTGAGTCAGGACATATTTGATATGACTTAATCATACTCCCTC  640

seq1  CAAAAGGAAATAAGGCTTTGTGAAGGTAAATTATTTCTTCCTGGGTTGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGAAATAAGGCTTTGTGAAGGTAAATTATTTCTTCCTGGGTTGGA  690

seq1  TATGTGTTTATGGAGTGATCATTCAGCTGTTCCCAACCTTCATTCTGAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTTTATGGAGTGATCATTCAGCTGTTCCCAACCTTCATTCTGAAA  740

seq1  AGGCCTCAGAACACTTCATGATGAATCAAGCTGTATCCTGAATAGAGTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCAGAACACTTCATGATGAATCAAGCTGTATCCTGAATAGAGTAA  790

seq1  AATGAACCACTTCGTAGGAACTATGGTGTCACCACATCAGCAATTCTTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACCACTTCGTAGGAACTATGGTGTCACCACATCAGCAATTCTTAT  840

seq1  TGAAAAGTGTGCATTTCTTATTCACATATTTCAAAGATGGTATTCCAGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGTGTGCATTTCTTATTCACATATTTCAAAGATGGTATTCCAGAG  890

seq1  GAGTGATTTTCTCAATGTATTTTTCATCTACAAGCCTTCATTTTAAGCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATTTTCTCAATGTATTTTTCATCTACAAGCCTTCATTTTAAGCCT  940

seq1  ACCACCGTGTGTGTTTTCAAGACAGCAATTATCGTTTTAAAATGTGCAGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCGTGTGTGTTTTCAAGACAGCAATTATCGTTTTAAAATGTGCAGG  990

seq1  TCTAGCTTGAGCTTCTCAGCAAGTTTCTATGCCAAAGAAAACACCAATCC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTTGAGCTTCTCAGCAAGTTTCTATGCCAAAGAAAACACCAATCC  1040

seq1  TTTCCATTTACTGAGAATCAATGTTTAATCCTCCTTTTTGTTCTCATACT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTTACTGAGAATCAATGTTTAATCCTCCTTTTTGTTCTCATACT  1090

seq1  TATTACAAATCATAAAGAATTC  1121
      ||||||||||||||||||||||
seq2  TATTACAAATCATAAAGAATTC  1112


seq1: chr3_150362209_150363324
seq2: B6Ng01-302M18.g_69_1174

seq1  GAATTCTTAAGATTCTTCTCCTCTTCAATGTTTACATTGTCTACTTTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGATTCTTCTCCTCTTCAATGTTTACATTGTCTACTTTCAC  50

seq1  TTTGGTAACTTTTCAAAATGAAATTTTTTACACATTATACATTTTAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAACTTTTCAAAATGAAATTTTTTACACATTATACATTTTAGAAA  100

seq1  AATTTTGATTCAAAAGGCTAGGTCGTATAGGAAAAAACAAACCAGGCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGATTCAAAAGGCTAGGTCGTATAGGAAAAAACAAACCAGGCAGA  150

seq1  CTTCATCCTTGTCCCCTGCCTCCCAGGTTCTCTCCGATTCATCTTTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCCTTGTCCCCTGCCTCCCAGGTTCTCTCCGATTCATCTTTGTCT  200

seq1  CCTGCATCCCAGGTTTTTCTTGGAGCAAACAGTAATACAAGCTATTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATCCCAGGTTTTTCTTGGAGCAAACAGTAATACAAGCTATTCAAA  250

seq1  ACTGTTTCGTTCACTTAAAAGTGGACCAGTGTAATATATCCTTTCTATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTCGTTCACTTAAAAGTGGACCAGTGTAATATATCCTTTCTATGT  300

seq1  AGGTTTACTTTAGTAAGTAGTTACATTATATTTTGTTCAAACTATACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTACTTTAGTAAGTAGTTACATTATATTTTGTTCAAACTATACAGT  350

seq1  AGAATTCTGATTGGCATTCTGCTCTGGACCCCACGGCACTGGTTAAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTGATTGGCATTCTGCTCTGGACCCCACGGCACTGGTTAAAGTA  400

seq1  ATTACCCTATAAGAAAAGCCAGAAATGGTCCTCAAATAAGAGGTGCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCCTATAAGAAAAGCCAGAAATGGTCCTCAAATAAGAGGTGCAAAA  450

seq1  CAGGCATAACCAAGTATTGACTCCTTAAGCCAGGGCCTCAGCCTGAGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATAACCAAGTATTGACTCCTTAAGCCAGGGCCTCAGCCTGAGGTG  500

seq1  TCAGCCCCCAGTCAGTGTCCTCAGAACCTCTGTGAATAAGAGTACATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCCCAGTCAGTGTCCTCAGAACCTCTGTGAATAAGAGTACATAGA  550

seq1  TCACATTCCTGCATTAGATGTGAGCTCTTGTGGGACAAGAAGTCAAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTCCTGCATTAGATGTGAGCTCTTGTGGGACAAGAAGTCAAATTT  600

seq1  CAGCTTAGCTCTTGAAAAATAGAAGTATATATACACTCTGAAGGCATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTAGCTCTTGAAAAATAGAAGTATATATACACTCTGAAGGCATAAA  650

seq1  TGAATATTTTTTGCTCACTGAATTTTTTTTTTCAGGACTGTCAGCAAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTTTTTGCTCACTGAATTTTTTTTTTCAGGACTGTCAGCAAGAC  700

seq1  CCACTTAATAATGTCATAATATTTCCACATAGATTTCATCTTTGCAGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAATAATGTCATAATATTTCCACATAGATTTCATCTTTGCAGTGC  750

seq1  AGAGCTTTCCCATGTGTTAATGTATTTGGTTTTGAAACTATTCTTATTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTTCCCATGTGTTAATGTATTTGGTTTTGAAACTATTCTTATTTC  800

seq1  TTTAAATCATAGTAAGCAGACCAAGTTCCATGGACTTGAGGTAGAAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATCATAGTAAGCAGACCAAGTTCCATGGACTTGAGGTAGAAAAAA  850

seq1  TTGTAGTGTTTATTTGCCTCAAGTATATGTAGCTGTTATTAAAACTTTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTGTTTATTTGCCTCAAGTATATGTAGCTGTTATTAAAACTTTGG  900

seq1  TCCTG-AAGGAAATCCTGTCCTTTGTTGCCATAGCAAAAGACATAAAGAG  949
      ||||| ||||||||||||||||||||||||||||| |||||||||| |||
seq2  TCCTGAAAGGAAATCCTGTCCTTTGTTGCCATAGC-AAAGACATAAGGAG  949

seq1  AAAGGAAAAGACTACATAAATATTTATCTAAGTCATTAAACAATAGATGT  999
      ||  | ||||||||||| ||||||||||||||||||  ||| ||||||||
seq2  AA--GGAAAGACTACAT-AATATTTATCTAAGTCAT--AAC-ATAGATGT  993

seq1  CGCTATCAATTTGAAGGAAAGTGCACCCTGACTATGACACTTTTAGATAT  1049
      ||||||| ||||||  | ||||||||||||||||||||||||||||||||
seq2  CGCTATC-ATTTGA--GGAAGTGCACCCTGACTATGACACTTTTAGATAT  1040

seq1  T-CGGACAGTCCATGTGAAGGAACAAGGCATTGGCAGAAAC--TGGTG-T  1095
      | |||||||| |||||||  ||||||| |||  ||||||||   |||| |
seq2  TCCGGACAGT-CATGTGA--GAACAAGCCAT--GCAGAAACCTGGGTGTT  1085

seq1  TATATACCATCTACAGCAAAT  1116
      ||  || ||||||||||||||
seq2  TAATTAGCATCTACAGCAAAT  1106


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