BAC Information

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BAC

Clone NameB6Ng01-303P15
Chromosome3 (Build37)
Map Location 141,344,708 - 141,475,273
singlet/doubletdoublet
Overlap geneUnc5c
Upstream geneLOC621343, 4930590L14Rik, Pdha2, LOC100039923
Downstream geneBmpr1b, Gabarapl2-ps3, Pdlim5, Gbp5, Gbp6, Gbp3, Gbp1, Gbp2, EG621605, Ccbl2, Gtf2b, Pkn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303P15.bB6Ng01-303P15.g
ACCGA097644GA097645
length1,1331,156
definitionB6Ng01-303P15.b B6Ng01-303P15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,344,708 - 141,345,846)(141,474,114 - 141,475,273)
sequence
gaattctttctggggtcttttgtttgtttatttgtttttataaaactaga
ttcacctgcaacttgggtcctcagctctatactttaacattctgatttta
ttattttgaggggaccatggtggtttttttaaaagcaagaaatattagaa
tatattaagtcttgaaatacattgcaaaactgaaatatttttagtgtctt
aaaaaaatcacatttttccttaaatgacagaacagacaaaagtcattgca
aacacattcattttcgagttatatcttcctcagaacaacacatgcaaatc
atatttagtagcaatcacatttcctagcaactaagcatagctaattgcat
ttaacaaagtctctaccaagataatttcacatttgaaaaattaataaaca
ctttgaagaagagagagatcttaaaaattcttttacttactcctaaccca
gtggcttacatctgctgttccatcactcagaaggctgaggcaagaggatt
gttatcagttcaaaagcaagcctacctagtgagttcaaggtcaccctaag
ctataacttgagaccctttcccaaccaaattaaatgaaaaaaaaaaaaaa
acagtgtccctctcaaattctgaaagcattctatggtccctcatcttctg
aggtttgaaacaaaggattactgatacttgtttaacgaaactatatcatt
ggtcaaaatgaagtctactaattaaagccctcactacacttaactgtttg
ccatttcaccatttaaactaacttgcatttcttttatatgtccaagaaaa
agaagaaaatgcaaactatgatacacttttacagtattcagaaattcttc
atctggtgacacagtaatatcacatcccaatatttatttatttgacttta
tatgtatgagtgttttatctgcgtgtatgtatgggccttacctgtgtttt
gtgcctgtgtggtccagaagaagatgatcctctagaactggagaaacggg
tggtggagccaaacacaggtctctgcaagaagaatcaagagctctgacac
tgagctgtctctctagctcaaatcacatagaaatgtggctctgaatcaaa
actaacgtatatttaagaacatctcaaggctca
gaattccatcacagaaacaagctgcttgcacaataaccaattaaacccag
gcactgtccatgccaagccattagcctgggccacttaagaggcataataa
atccaagctcctttaaaggcctatgaggaacaatgaagcagctcttgtct
gtgctcagggctctcaaaggctctctgatagtaagatatatccacattgg
acccagtatggaggcatacctgagagcctatggctcttatgttctttcta
taccaccagaaattctcactcttcaggattgtgcagccatgtggcatttg
ccacttctctccctgcccccttttctcctaatgagccttccaacactggg
cgaacttccttctagagaagtctcacaattaggattcttatcactaaaga
tcaccaaatcactgatcactaaagagagggtaggaaggagacaaaaacca
ccccttgtttcacttctctacttaaaactatctgtccctgtacctaaaat
aaaataaaagaaaagaatatttctgtgtactccaacagaaatatgaatgg
gctccatctacttctgctaaggagttggatcaccactggtacagtaagga
cctactctagagaaatctttaagccccaaagatatgaaggtcacaggagc
cagcctcctcctccagaaatttgtgcttgcttgccttagcttaaggagct
aggaccttccctttgctctgtccttggtgctgatccagtgcagggctttg
ctagggcattatcatcacagaactctatgacttgagaacaacttagcacg
tgttcagcacaccaagcacactaagccgcagactagccctcagtgattgt
gttgactgaactaaacctgccttcagattcagtgaaacctgccctatttt
ttatgtagtctttattcctatgttgaaaaatgccctggtcatttagtaat
gagaagtttctttctgctactgtggctatttccacagcccctgtcacagc
agtgcgctgcactctacaagcagaggcaaaaagagcagcagtccctctcc
cctgtccccaccaagcttccagtagcagcctctcagtcctgtgcctgcct
gtccgcccttggcttcaggcatctggctgcttgaacctggcctattgggg
aatagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_141344708_141345846
seq2: B6Ng01-303P15.b_50_1182

seq1  GAATTCTTTCTGGGGTCTTTTGTTTGTTTATTTGTTTTTATAAAACTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGGGGTCTTTTGTTTGTTTATTTGTTTTTATAAAACTAGA  50

seq1  TTCACCTGCAACTTGGGTCCTCAGCTCTATACTTTAACATTCTGATTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTGCAACTTGGGTCCTCAGCTCTATACTTTAACATTCTGATTTTA  100

seq1  TTATTTTGAGGGGACCATGGTGGTTTTTTTAAAAGCAAGAAATATTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGAGGGGACCATGGTGGTTTTTTTAAAAGCAAGAAATATTAGAA  150

seq1  TATATTAAGTCTTGAAATACATTGCAAAACTGAAATATTTTTAGTGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAAGTCTTGAAATACATTGCAAAACTGAAATATTTTTAGTGTCTT  200

seq1  AAAAAAATCACATTTTTCCTTAAATGACAGAACAGACAAAAGTCATTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATCACATTTTTCCTTAAATGACAGAACAGACAAAAGTCATTGCA  250

seq1  AACACATTCATTTTCGAGTTATATCTTCCTCAGAACAACACATGCAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATTCATTTTCGAGTTATATCTTCCTCAGAACAACACATGCAAATC  300

seq1  ATATTTAGTAGCAATCACATTTCCTAGCAACTAAGCATAGCTAATTGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAGTAGCAATCACATTTCCTAGCAACTAAGCATAGCTAATTGCAT  350

seq1  TTAACAAAGTCTCTACCAAGATAATTTCACATTTGAAAAATTAATAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAAGTCTCTACCAAGATAATTTCACATTTGAAAAATTAATAAACA  400

seq1  CTTTGAAGAAGAGAGAGATCTTAAAAATTCTTTTACTTACTCCTAACCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGAAGAGAGAGATCTTAAAAATTCTTTTACTTACTCCTAACCCA  450

seq1  GTGGCTTACATCTGCTGTTCCATCACTCAGAAGGCTGAGGCAAGAGGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTACATCTGCTGTTCCATCACTCAGAAGGCTGAGGCAAGAGGATT  500

seq1  GTTATCAGTTCAAAAGCAAGCCTACCTAGTGAGTTCAAGGTCACCCTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCAGTTCAAAAGCAAGCCTACCTAGTGAGTTCAAGGTCACCCTAAG  550

seq1  CTATAACTTGAGACCCTTTCCCAACCAAATTAAATGAAAAAAAAAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAACTTGAGACCCTTTCCCAACCAAATTAAATGAAAAAAAAAAAAAA  600

seq1  ACAGTGTCCCTCTCAAATTCTGAAAGCATTCTATGGTCCCTCATCTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTCCCTCTCAAATTCTGAAAGCATTCTATGGTCCCTCATCTTCTG  650

seq1  AGGTTTGAAACAAAGGATTACTGATACTTGTTTAACGAAACTATATCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGAAACAAAGGATTACTGATACTTGTTTAACGAAACTATATCATT  700

seq1  GGTCAAAATGAAGTCTACTAATTAAAGCCCTCACTACACTTAACTGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAAATGAAGTCTACTAATTAAAGCCCTCACTACACTTAACTGTTTG  750

seq1  CCATTTCACCATTTAAACTAACTTGCATTTCTTTTATATGTCCAAGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCACCATTTAAACTAACTTGCATTTCTTTTATATGTCCAAGAAAA  800

seq1  AGAAGAAAATGCAAACTATGATACACTTTTACAGTATTCAGAAATTCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAATGCAAACTATGATACACTTTTACAGTATTCAGAAATTCTTC  850

seq1  ATCTGGTGACACAGTAATATCACATCCCAATATTTATTTATTTGACTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTGACACAGTAATATCACATCCCAATATTTATTTATTTGACTTTA  900

seq1  TATGTATGAGTGTTTTATCTGCGTGTATGTATGGGCCTTACCTGTGTTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGAGTGTTTTATCTGCGTGTATGTATGGGCCTTACCTGTGTTTT  950

seq1  GTGCCTGTGTGGTCCAGAAGAAAGATGATCCTCTAGAACTGGAGAAACGG  1000
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTGCCTGTGTGGTCCAGAAG-AAGATGATCCTCTAGAACTGGAGAAACGG  999

seq1  GTG--TGAGCCAAACACAGGTCCTCTGCAAG-AGAATCAAGAGCTCTTGA  1047
      |||   ||||||||||||||| ||||||||| |||||||||||||| |||
seq2  GTGGTGGAGCCAAACACAGGT-CTCTGCAAGAAGAATCAAGAGCTC-TGA  1047

seq1  CCACTGAGCTGTCTCTCTAGCCTCCAAATCACATAGAAATGTGGCTCTG-  1096
       ||||||||||||||||||||   ||||||||||||||||||||||||| 
seq2  -CACTGAGCTGTCTCTCTAGC--TCAAATCACATAGAAATGTGGCTCTGA  1094

seq1  ATCAAAAATTTACCGTTATATTTTAAAGAACATCTC-AGGCTCA  1139
      |||||||   || || |||||||  ||||||||||| |||||||
seq2  ATCAAAA--CTAACG-TATATTT--AAGAACATCTCAAGGCTCA  1133

seq1: chr3_141474114_141475273
seq2: B6Ng01-303P15.g_65_1220 (reverse)

seq1  GCTATTCCCC-ATAGCCCAGCT--CAGCAGCCAGAGGCCTGAAGGCCAGA  47
      |||||||||| |||| |||| |   |||||||||| ||||||| ||||  
seq2  GCTATTCCCCAATAGGCCAGGTTCAAGCAGCCAGATGCCTGAA-GCCAAG  49

seq1  GGCGGGGACA-GCAGGCACAGGGCTGAGA-GCTGCCTACTGGAAAGCTGG  95
      |||  ||||| ||||||||||| |||||| |||| |||||||||   |||
seq2  GGC--GGACAGGCAGGCACAGGACTGAGAGGCTG-CTACTGGAAGCTTGG  96

seq1  TGGGGAACAGGGGAGAGGGACTGCTGCTCTTTTTGGCCTCTGCTTTGGTA  145
      ||||| |||||||||||||||||||||||||||| ||||||||||  |||
seq2  TGGGG-ACAGGGGAGAGGGACTGCTGCTCTTTTT-GCCTCTGCTT--GTA  142

seq1  GAGTGCAGGCGCACTGCTGTGACAGGGGCTGTGGAAATAGCCACAGTTAG  195
      ||||||| |||||||||||||||||||||||||||||||||||||| |||
seq2  GAGTGCA-GCGCACTGCTGTGACAGGGGCTGTGGAAATAGCCACAG-TAG  190

seq1  CAGAAAGAAACTTCTCATTACTAAATGACCAGGGCATTTTTCAACATAGG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAAACTTCTCATTACTAAATGACCAGGGCATTTTTCAACATAGG  240

seq1  AATAAAGACTACAT-AAAAATAGGGCAGGTTTCACTGAATCTGAAGGCAG  294
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AATAAAGACTACATAAAAAATAGGGCAGGTTTCACTGAATCTGAAGGCAG  290

seq1  GTTTAGTTCAGTCAACACAATCACTGAGGGCTAGTCTGCGGCTTAGTGTG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGTTCAGTCAACACAATCACTGAGGGCTAGTCTGCGGCTTAGTGTG  340

seq1  CTTGGTGTGCTGAACACGTGCTAAGTTGTTCTCAAGTCATAGAGTTCTGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGTGCTGAACACGTGCTAAGTTGTTCTCAAGTCATAGAGTTCTGT  390

seq1  GATGATAATGCCCTAGCAAAGCCCTGCACTGGATCAGCACCAAGGACAGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATAATGCCCTAGCAAAGCCCTGCACTGGATCAGCACCAAGGACAGA  440

seq1  GCAAAGGGAAGGTCCTAGCTCCTTAAGCTAAGGCAAGCAAGCACAAATTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGGAAGGTCCTAGCTCCTTAAGCTAAGGCAAGCAAGCACAAATTT  490

seq1  CTGGAGGAGGAGGCTGGCTCCTGTGACCTTCATATCTTTGGGGCTTAAAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGAGGAGGCTGGCTCCTGTGACCTTCATATCTTTGGGGCTTAAAG  540

seq1  ATTTCTCTAGAGTAGGTCCTTACTGTACCAGTGGTGATCCAACTCCTTAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTAGAGTAGGTCCTTACTGTACCAGTGGTGATCCAACTCCTTAG  590

seq1  CAGAAGTAGATGGAGCCCATTCATATTTCTGTTGGAGTACACAGAAATAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTAGATGGAGCCCATTCATATTTCTGTTGGAGTACACAGAAATAT  640

seq1  TCTTTTCTTTTATTTTATTTTAGGTACAGGGACAGATAGTTTTAAGTAGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTTTTATTTTATTTTAGGTACAGGGACAGATAGTTTTAAGTAGA  690

seq1  GAAGTGAAACAAGGGGTGGTTTTTGTCTCCTTCCTACCCTCTCTTTAGTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGAAACAAGGGGTGGTTTTTGTCTCCTTCCTACCCTCTCTTTAGTG  740

seq1  ATCAGTGATTTGGTGATCTTTAGTGATAAGAATCCTAATTGTGAGACTTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGATTTGGTGATCTTTAGTGATAAGAATCCTAATTGTGAGACTTC  790

seq1  TCTAGAAGGAAGTTCGCCCAGTGTTGGAAGGCTCATTAGGAGAAAAGGGG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAGGAAGTTCGCCCAGTGTTGGAAGGCTCATTAGGAGAAAAGGGG  840

seq1  GCAGGGAGAGAAGTGGCAAATGCCACATGGCTGCACAATCCTGAAGAGTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGAGAGAAGTGGCAAATGCCACATGGCTGCACAATCCTGAAGAGTG  890

seq1  AGAATTTCTGGTGGTATAGAAAGAACATAAGAGCCATAGGCTCTCAGGTA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCTGGTGGTATAGAAAGAACATAAGAGCCATAGGCTCTCAGGTA  940

seq1  TGCCTCCATACTGGGTCCAATGTGGATATATCTTACTATCAGAGAGCCTT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCATACTGGGTCCAATGTGGATATATCTTACTATCAGAGAGCCTT  990

seq1  TGAGAGCCCTGAGCACAGACAAGAGCTGCTTCATTGTTCCTCATAGGCCT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCCCTGAGCACAGACAAGAGCTGCTTCATTGTTCCTCATAGGCCT  1040

seq1  TTAAAGGAGCTTGGATTTATTATGCCTCTTAAGTGGCCCAGGCTAATGGC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGAGCTTGGATTTATTATGCCTCTTAAGTGGCCCAGGCTAATGGC  1090

seq1  TTGGCATGGACAGTGCCTGGGTTTAATTGGTTATTGTGCAAGCAGCTTGT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATGGACAGTGCCTGGGTTTAATTGGTTATTGTGCAAGCAGCTTGT  1140

seq1  TTCTGTGATGGAATTC  1160
      ||||||||||||||||
seq2  TTCTGTGATGGAATTC  1156