BAC Information

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BAC

Clone NameB6Ng01-306N24
Chromosome3 (Build37)
Map Location 139,072,131 - 139,072,938
singlet/doubletsinglet
Overlap geneB930007M17Rik
Upstream geneAdh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1, Tspan5, LOC620771, Rap1gds1, EG229879
Downstream geneLOC100039840, LOC229883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306N24.bB6Ng01-306N24.g
ACCGA099794GA099795
length1,1841,038
definitionB6Ng01-306N24.b B6Ng01-306N24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctagacgcagacatccagttaggccagcaccactttttgatg
atgtttcattttctagtatgtatttatggcttcttaatttaaaaaaaaaa
tcaggttcttcaattccatcgatcaacatgtctgttttatgacaacacaa
tgtggtttatataattataatataattatagttttgtagtacaacctgag
atcaggaatggtgagaccttcagcagttcttttattgctcaggattattt
tagctcaccttctttggtttttcatatgaagttgagaattgttctttcaa
ggttataaacaaaactgcccagtctctccctatttattcaatatagtact
caaagttctagccagagcaattagacaacaaaaggaggtcaaagaaatac
aaattgtaaaggaagaagtcaaagtatcactgtttgcagatgataagata
gtatatttaagtgaccccaaaacctctaccaaagaactcctacagctgat
aaacacttcagccaagtgcctggatataaaattaactcaaaaaaatcagt
agccttcctcaaattcaaaagtggcctaaggaagaaattagggaaacgac
acccttcataatagtcagaaataatataaaatatcttggtgtaactctag
ctaagtaagtgggagatctttatgatgaaaacttcaaatccctgaagaaa
gaaatcaaagaaaacctcagaagatgtaaaaaactctgcaattttttaat
gtaggtgtctagtggtacaacctttccttgtgtcattgtgctttcattat
gtatcataaatttggggagtctgtttattctttttcattaactatagaaa
gtctttttcctctttcttagtctgtgtactgacccatttttcatctgtag
aaagctgttaagcttccgtgagtttgtaaccattttgttgtttcttttct
ttggtgtggtaaattcttcagttggaattttctatagacatgttttttag
attagtactgctaattgattttatcataaacgttctctgggtgtgtctct
ggtctctctgatcgtgattcaaagttctctagggataggtaggtctagct
gctatcctgtgtctcggttaagtcagtagcacttgtctgccttctgacct
tagagctctcgtatcactcgtgaggaaactagct
gaattcagtgagaaggttacctatttagtaacattcaaatttacttctag
tagagacagtgaaactaattaagcattacaaagaatggagctgcaatagc
tcatggctggtctgcagagtatttatttgggacaatagccagtcttaccc
agacaagggaattcacaatggcttagagaataggtgggtttaccatgaaa
gaattagggaacccccctgagacaggtttcttcactaggcccaaagaaac
agcataattagacatttactaagaacccctggtggtgggcttaacaatag
gctagcattacacctggctcagttcttagtggcagtgacctggtccccgc
cttcttatgatggatacattccttttgtattgtgtcactctgactgagcg
gatgtatctcacctggttacttgtcgctcttctgtataaaaagtatgatg
ctcgacttgaaacattacattcagattctacacaatctcttatgttgatt
ctgtctgtcattcatttgccgactccttgtccacctgcaaccagagaccc
gttctacgcagacagggaccgaaaagggtctgcgacaggagggcaaaggg
aagcttgcctctatggcttaggatctgcacgctgaggaaggtggtggggg
aatgaaggtccctgagatagttggctgctcagggcagctggcctggccca
gagagctctgagagcagcagcgaggaaacaatggcttttgtcatagcatt
ttctgtctatggcacttttttgttgttcctcccatccccaggcctatgtg
tcatgtgatagaacatagttcctagtttccttttaataacacagaataat
ttacataacctattatctcatgtgccaagagaaccatgcaaaatgaagcc
aggaatcttgttttttggctaattgttatcattccacaatacagttgcaa
tttctgtctttaaatgttcttgtcttctaaagtaagaatatactgcttta
atttcatatatctcccccaggtggtatgtttatcatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_139072131_139072938
seq2: B6Ng01-306N24.g_283_1102

seq1  GAGACAGGTTTCTTCACTAGGCCCAAAGAAACAGCATAATTAGACATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGGTTTCTTCACTAGGCCCAAAGAAACAGCATAATTAGACATTTA  50

seq1  CTAAGAACCCCTGGTGGTGGGCTTAACAATAGGCTAGCATTACACCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAACCCCTGGTGGTGGGCTTAACAATAGGCTAGCATTACACCTGGC  100

seq1  TCAGTTCTTAGTGGCAGTGACCTGGTCCCCGCCTTCTTATGATGGATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTTAGTGGCAGTGACCTGGTCCCCGCCTTCTTATGATGGATACA  150

seq1  TTCCTTTTGTATTGTGTCACTCTGACTGAGCGGATGTATCTCACCTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTGTATTGTGTCACTCTGACTGAGCGGATGTATCTCACCTGGTT  200

seq1  ACTTGTCGCTCTTCTGTATAAAAAGTATGATGCTCGACTTGAAACATTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTCGCTCTTCTGTATAAAAAGTATGATGCTCGACTTGAAACATTAC  250

seq1  ATTCAGATTCTACACAATCTCTTATGTTGATTCTGTCTGTCATTCATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGATTCTACACAATCTCTTATGTTGATTCTGTCTGTCATTCATTTG  300

seq1  CCGACTCCTTGTCCACCTGCAACCAGAGACCCGTTCTACGCAGACAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTCCTTGTCCACCTGCAACCAGAGACCCGTTCTACGCAGACAGGGA  350

seq1  CCGAAAAGGGTCTGCGACAGGAGGGCAAAGGGAAGCTTGCCTCTATGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAAAGGGTCTGCGACAGGAGGGCAAAGGGAAGCTTGCCTCTATGGCT  400

seq1  TAGGATCTGCACGCTGAGGAAGGTGGTGGGGGAATGAAGGTCCCTGAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATCTGCACGCTGAGGAAGGTGGTGGGGGAATGAAGGTCCCTGAGAT  450

seq1  AGTTGGCTGCTCAGGGCAGCTGGCCTGGCCCAGAGAGCTCTGAGAGCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCTGCTCAGGGCAGCTGGCCTGGCCCAGAGAGCTCTGAGAGCAGC  500

seq1  AGCGAGGAAACAATGGCTTTTGTCATAGCA-TTTCTGTCTATGGCAC-TT  548
      |||||||||||||||||||||||||||||| |||||||||||||||| ||
seq2  AGCGAGGAAACAATGGCTTTTGTCATAGCATTTTCTGTCTATGGCACTTT  550

seq1  TTTGTTGTTCCTCCCATCCCCAGGCCTATGTGTCATGTGATAGAACATAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTCCTCCCATCCCCAGGCCTATGTGTCATGTGATAGAACATAG  600

seq1  TT-CTAGTT--CCTTTAATAACACAGAATAA-TTACATAACCTATTATCT  644
      || ||||||  | |||||||||||||||||| ||||||||||||||||||
seq2  TTCCTAGTTTCCTTTTAATAACACAGAATAATTTACATAACCTATTATCT  650

seq1  CATGTGCCAAGAGAA-CATGCAAAATGAAGCCAGG-ATCTTGTTTTTTGC  692
      ||||||||||||||| ||||||||||||||||||| ||||||||||||| 
seq2  CATGTGCCAAGAGAACCATGCAAAATGAAGCCAGGAATCTTGTTTTTTGG  700

seq1  CTATTGTTTATCATT-CACAATACAGTTGC-ATTTCTGTCTTTAAATGTT  740
      ||| |  |||||||| |||||||||||||| |||||||||||||||||||
seq2  CTAATTGTTATCATTCCACAATACAGTTGCAATTTCTGTCTTTAAATGTT  750

seq1  CTTGTCTTCTAAAGTAAG-ATATACTGCTTTTAAATTCATATATCT-CCA  788
      |||||||||||||||||| ||||||||| ||||| ||||||||||| || 
seq2  CTTGTCTTCTAAAGTAAGAATATACTGC-TTTAATTTCATATATCTCCCC  799

seq1  CAGGT-GTATGTTTATCATGA  808
      ||||| |||||||||||||||
seq2  CAGGTGGTATGTTTATCATGA  820