BAC Information

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BAC

Clone NameB6Ng01-308B02
Chromosome3 (Build37)
Map Location 11,589,438 - 11,590,612
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670564, LOC383826, EG667978
Downstream geneLOC667999, EG621965
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308B02.bB6Ng01-308B02.g
ACCGA100666GA100667
length1,1921,161
definitionB6Ng01-308B02.b B6Ng01-308B02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccaggtaaagtgctagctaatcagttaaggaagccaaaagcggctggcg
aaggccagtttgctgattggcctcagggcagtcggcttcaaggtccgccc
tatgcggagtccccgccctgcgtagtgcgtcagccctgcgcggagaggca
gtgcgcagagaggcagtgcgcagactcattcattcccagagaggaacaaa
ggaaaatacaacaggcatttccagtctttgaaggagccgagggtgggcgt
gtccacgctccggtagaatacttacaaattaaagaacttgccgagtcggt
ccgtaaatacggaaccaatgctaattttaccttggtgcagttagacaggc
ttgccggcatggcactaactcctgctgactggcaaacggttgtaaaagcc
gctctccctagtatgggcaaatatatggaatggagagctctttggcatga
aactgcacaagcgcaggcccgagcaaacgcagctgctttgactccagagc
agagagattggacttttgacttgttaacgggtcagggagcttattctgct
gatcagacaaactaccattggggagcttatgcccagatttcttccacggc
tattagggcctggaaggcgctctctcgagcaggtgaaaccactgggcagt
taacaaagataatccagggacctcaggaatccttctcagattttgtggcc
agaatgacagaggcagcagagcgtatttttggagagtcagagcaagctgc
gcctctgatagaacagctaatctatgagcaagccacaaaggagtgccgag
cggccatagccccaagaaagaacaaaggcttacaagactggctcagggtc
tgtcgagagcttgggggacctctcaccaatgcaaggcttagcggccgcca
tccttcatctcagaaccgctccatgggcagaaatgatcagaggacatgtt
ttactgcggaaagcctgggcattttaagaaagattgcagagctcagataa
caggaagggactctcactctttgctctaagtgtgcagggtatcatagagt
cgacagtgtcgctctgtgagggaattaaggccggatctcccactgaatag
tcatcactgaagtgtgcctaaaaacgggtcaatcgggactct

gaattctttgtttagctctgagccctgttttttaatggggttatttcatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgatggtgtcttttgccttgtagaagctttgcagattca
tgagatcccatttgtcaattctggatcttacaggctcttgctgttcttgc
tcttgctcttcgtcttcctcttcctcttcttcttcttcttccttttcctc
ctccttctcttcttcttctgctcctcctcctccttcatctcttattctta
ctcttcttcctccttcttctctttctccacctcctctttcttctttttaa
taaacaagtgttcctcattaactgtaaggaacttattaaatattacaata
tttgttaagagacaaaattcagagttacatgttttctagacttattttgt
gcttaaagaggggaacaattcaatgagccaaggaaaatcaaaggtgacag
tggaaacttattatatttatataaaaatttgatatggataaccaaataaa
attttctttctttcttttttttttctgtgacagaacaccaagatcaaggc
aacttacagaagacacagtttatttgagtttatttgttaaagcttaacag
gagtagagtaatgaccatggtaggaagcatagcagcaagcaggcaagcat
ggtgctggagcagtagctaagagatcatgtcttgagacctaaccaaagac
aaagagagctaactaggattagcatgggtttttgaaaccccacatactgc
cctcagtgacacactgtcttcatttaggccacttctctcaatctttaaca
aacagttccatctcctgaggaccaagtattcaaacatatcagcctctaga
ggccattttaattaaaaccacttcaaaacacatgattatgtttttagtca
ctatagagagagagcagaagccacaagcagcagcgtcgccatctgatctg
gacccgtcgaacttagaacagtctgaacaggtgaagaggggtgcgccaga
gtacttgacagcttctgaacagcgaagccagaggcctgagcagcaccttg
tgggccgggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_11589438_11590612
seq2: B6Ng01-308B02.g_67_1227

seq1  GAATTCTTTGTTTAGCTCTGAGCCCTGTTTTTTAATGGGGTTATTTCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGAGCCCTGTTTTTTAATGGGGTTATTTCATT  50

seq1  TTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150

seq1  TTTTGTCTTATTGATGGTGTCTTTTGCCTTGTAGAAGCTTTGCAGATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATTGATGGTGTCTTTTGCCTTGTAGAAGCTTTGCAGATTCA  200

seq1  TGAGATCCCATTTGTCAATTCTGGATCTTACAGGCTCTTGCTGTTCTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCCCATTTGTCAATTCTGGATCTTACAGGCTCTTGCTGTTCTTGC  250

seq1  TCTTGCTCTTCGTCTTCCTCTTCCTCTTCTTCTTCTTCTTCCTTTTCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTCTTCGTCTTCCTCTTCCTCTTCTTCTTCTTCTTCCTTTTCCTC  300

seq1  CTCCTTCTCTTCTTCTTCTGCTCCTCCTCCTCCTTCATCTCTTATTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTCTTCTTCTTCTGCTCCTCCTCCTCCTTCATCTCTTATTCTTA  350

seq1  CTCTTCTTCCTCCTTCTTCTCTTTCTCCACCTCCTCTTTCTTCTTTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTTCCTCCTTCTTCTCTTTCTCCACCTCCTCTTTCTTCTTTTTAA  400

seq1  TAAACAAGTGTTCCTCATTAACTGTAAGGAACTTATTAAATATTACAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAGTGTTCCTCATTAACTGTAAGGAACTTATTAAATATTACAATA  450

seq1  TTTGTTAAGAGACAAAATTCAGAGTTACATGTTTTCTAGACTTATTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAAGAGACAAAATTCAGAGTTACATGTTTTCTAGACTTATTTTGT  500

seq1  GCTTAAAGAGGGGAACAATTCAATGAGCCAAGGAAAATCAAAGGTGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAAGAGGGGAACAATTCAATGAGCCAAGGAAAATCAAAGGTGACAG  550

seq1  TGGAAACTTATTATATTTATATAAAAATTTGATATGGATAACCAAATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACTTATTATATTTATATAAAAATTTGATATGGATAACCAAATAAA  600

seq1  ATTTTCTTTCTTTCTTTTTTTTTTCTGTGACAGAACACCAAGATCAAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTCTTTCTTTTTTTTTTCTGTGACAGAACACCAAGATCAAGGC  650

seq1  AACTTACAGAAGACACAGTTTATTTGAGTTTATTTGTTAAAGCTTAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTACAGAAGACACAGTTTATTTGAGTTTATTTGTTAAAGCTTAACAG  700

seq1  GAGTAGAGTAATGACCATGGTAGGAAGCATAGCAGCAAGCAGGCAAGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAGTAATGACCATGGTAGGAAGCATAGCAGCAAGCAGGCAAGCAT  750

seq1  GGTGCTGGAGCAGTAGCTAAGAGATCATGTCTTGAGACCTAACCAAAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGAGCAGTAGCTAAGAGATCATGTCTTGAGACCTAACCAAAGAC  800

seq1  AAAGAGAGCTAACTAGGATTAGCATGGGTTTTTGAAACCCCACATACTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGCTAACTAGGATTAGCATGGGTTTTTGAAACCCCACATACTGC  850

seq1  CCTCAGTGACACACTGTCTTCATTTAGGCCACTTCTCTCAATCTTTAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTGACACACTGTCTTCATTTAGGCCACTTCTCTCAATCTTTAACA  900

seq1  AACAGTTCCATCTCCTGAGGACCAAGTATTCAAACATATCAGCCTCTAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTCCATCTCCTGAGGACCAAGTATTCAAACATATCAGCCTCTAGA  950

seq1  GGCCATTTTAATTAAAACCACTTCAAAACACATGATTATG-TTTTAGTCA  999
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGCCATTTTAATTAAAACCACTTCAAAACACATGATTATGTTTTTAGTCA  1000

seq1  CTATTAGAAGAGAGAG-GCAGGAAGCCAC-AGCAGCAGCGGTCGCCATCT  1047
      ||||    |||||||| ||| |||||||| ||||||||| ||||||||| 
seq2  CTAT----AGAGAGAGAGCA-GAAGCCACAAGCAGCAGC-GTCGCCATC-  1043

seq1  TGGTCTGGGACCCGCCGAACTTAGGAAATTAGTCTGAACAGGTG-AGA-G  1095
      || ||| ||||||| |||||||||   |  |||||||||||||| ||| |
seq2  TGATCT-GGACCCGTCGAACTTAG---AACAGTCTGAACAGGTGAAGAGG  1089

seq1  GGTGCGCCAGAGAACCTGACAGCTTCTGGAACAGGCGGAAGCACAGAGGC  1145
      |||||||||||| || ||||||||||| ||||||   ||||| |||||||
seq2  GGTGCGCCAGAGTACTTGACAGCTTCT-GAACAG--CGAAGC-CAGAGGC  1135

seq1  GCTGAGGCAGCACCCTTTGTGGGCCGGGGA  1175
       |||| ||||||||  ||||||||||||||
seq2  -CTGA-GCAGCACC--TTGTGGGCCGGGGA  1161


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