BAC Information

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BAC

Clone NameB6Ng01-309F14
Chromosome3 (Build37)
Map Location 73,740,272 - 73,741,251
singlet/doubletsinglet
Overlap geneLOC667425
Upstream gene2010204N08Rik, Slitrk3, Bche
Downstream geneLOC619764, LOC667434, LOC100041551, EG667459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309F14.bB6Ng01-309F14.g
ACCGA101612GA101613
length1,044993
definitionB6Ng01-309F14.b B6Ng01-309F14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccaatataagattgaggctttacaatgctttgcttaataata
gatttaataattcattccatctatttccttcctgttcaatattatgacca
tttcaaaatgatcccttaaatttacaatctctatataatgaataaaataa
ccataaccagacacttaaacccaaggtattgggatgacaattctccacaa
cttcttcctgctaaatcaaggtgatgaaaattatttaatgctgtggggag
gagtaggaaaatttaaaaatctgattagacttaagaaaactagctttata
atctgttataaaatctctgtatgcttaggaggctagtggttcactgaagt
tttgagtaggtttgtctgaaaggctagatgaaccaagttcattaggaatt
gacagcaattctggaagctgttctgaacggaagtctctggacagcatcat
gaagcaggggcctgaaacagcaggtcacttcatcatctccaaggatgcat
tttgccaaagctgtacattctgtaatatatgaatctcacaaccaaaattt
tagtttaagatattcatatggattttgcaaggtgcacagatgaatgttgt
tttgatgaattttgtttcttctctgagcagaagaaaaacaactatccttt
aatgagttaatgggatcaataatcaattgaaagacatcttcattcaggcc
atatgaaggactacatggagaatcttaaagaatagataaccaaaaagatt
tattgtctaaatttatctgaggttttgggtagagatatttttctgtctaa
accagttattgagctgttatgatgtcaaggaataggaatcagcagatcaa
attacctgtcctgtttattttttttattttttttgaatttttcttttctg
tagtcaagatctttatgttgagggtccttgatacacttggattgagcttt
gtgcaaggtgacaaatatggatctgttttattgttctaatacagacttgt
cagtttagaaccagccacactttatttgaaaggattgcttcctg

gaattcaaattgttttcacctttaagtcatctctttttttttctaatatt
gtattggtaatagtatttgtaagttatcacttgtaaagttattgacgtat
ttaataaagcaccagccagtccacgattcagtaaagatgctaattatgag
gtggcccaaattagctgatgagaaattggcatgagagcaaactaatttga
aataatatttcttgaaaatgatataaattgatgttgtaagtgaactaata
tagctctattaacaattatttagttatcttctatcatctatcaatccatc
atctatctatctatctatctatctatctatctatctatctatctatctat
ctatctatctatcatgtatattttgtgtgtgtgtatgtgtactcatatgt
atgcacatgtgtgtgccacagtgatctccatagagatcagaggacaactt
tcaggattcagttactctgtggattttgaggatcaaacacgagtactgag
gcttgatgacaagcaccattgcccctttgccaagcagtaaacttttgttt
attgtaaagcctcaagtgactctccaaacatataacagaactctgtatgt
taagcacacatatttactactcagatccatgtattacattctgggagcac
aacaggttggtaggtgtctcttcctttagtaaaaatctttttgatacttt
acttagtagtcccattctgctgtctttgttttgccgtattattctgaact
tatctcatggattgtcagtgttggagaagctgtgagtaaatatgtaagga
ggtggatggtcctgagagaatctgtattatttgaaaaatagctaaatcct
caaaccctgttgctctaggtcatggttgacttccctgggaggtccacgtc
cttagaaccaggcattgttcttgtattgggaacttcttttttttgaagag
tttttccatacaaggaaagtggccctggaccattcctgtaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_73740272_73741251
seq2: B6Ng01-309F14.g_66_1058

seq1  GAATTCAAATTGTTTTCACCTTTAAGTCATCTCTTTTTTTTTCTAATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTGTTTTCACCTTTAAGTCATCTCTTTTTTTTTCTAATATT  50

seq1  GTATTGGTAATAGTATTTGTAAGTTATCACTTGTAAAGTTATTGACGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGGTAATAGTATTTGTAAGTTATCACTTGTAAAGTTATTGACGTAT  100

seq1  TTAATAAAGCACCAGCCAGTCCACGATTCAGTAAAGATGCTAATTATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAAGCACCAGCCAGTCCACGATTCAGTAAAGATGCTAATTATGAG  150

seq1  GTGGCCCAAATTAGCTGATGAGAAATTGGCATGAGAGCAAACTAATTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCCAAATTAGCTGATGAGAAATTGGCATGAGAGCAAACTAATTTGA  200

seq1  AATAATATTTCTTGAAAATGATATAAATTGATGTTGTAAGTGAACTAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATTTCTTGAAAATGATATAAATTGATGTTGTAAGTGAACTAATA  250

seq1  TAGCTCTATTAACAATTATTTAGTTATCTTCTATCATCTATCAATCCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTATTAACAATTATTTAGTTATCTTCTATCATCTATCAATCCATC  300

seq1  ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  350

seq1  CTATCTATCTATCATGTATATTTTGTGTGTGTGTATGTGTACTCATATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATCTATCATGTATATTTTGTGTGTGTGTATGTGTACTCATATGT  400

seq1  ATGCACATGTGTGTGCCACAGTGATCTCCATAGAGATCAGAGGACAACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATGTGTGTGCCACAGTGATCTCCATAGAGATCAGAGGACAACTT  450

seq1  TCAGGATTCAGTTACTCTGTGGATTTTGAGGATCAAACACGAGTACTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATTCAGTTACTCTGTGGATTTTGAGGATCAAACACGAGTACTGAG  500

seq1  GCTTGATGACAAGCACCATTGCCCCTTTGCCAAGCAGTAAACTTTTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGATGACAAGCACCATTGCCCCTTTGCCAAGCAGTAAACTTTTGTTT  550

seq1  ATTGTAAAGCCTCAAGTGACTCTCCAAACATATAACAGAACTCTGTATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAAGCCTCAAGTGACTCTCCAAACATATAACAGAACTCTGTATGT  600

seq1  TAAGCACACATATTTACTACTCAGATCCATGTATTACATTCTGGGAGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACACATATTTACTACTCAGATCCATGTATTACATTCTGGGAGCAC  650

seq1  AACAGGTTGGTAGGTGTCTCTTCCTTTAGTAAAAATCTTTTTGATACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGTTGGTAGGTGTCTCTTCCTTTAGTAAAAATCTTTTTGATACTTT  700

seq1  ACTTAGTAGTCCCATTCTGCTGTCTTTGTTTTGCCGTATTATTCTGAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTAGTCCCATTCTGCTGTCTTTGTTTTGCCGTATTATTCTGAACT  750

seq1  TATCTCATGGATTGTCAGTGTTGGAGAAGCTGTGAGTAAATATGTAAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCATGGATTGTCAGTGTTGGAGAAGCTGTGAGTAAATATGTAAGGA  800

seq1  GGTGGATGGTCCTGAGAGAATCTGTATTA-TTGAAAAATAGCTAAAT-CT  848
      ||||||||||||||||||||||||||||| ||||||||||||||||| ||
seq2  GGTGGATGGTCCTGAGAGAATCTGTATTATTTGAAAAATAGCTAAATCCT  850

seq1  CAAACCCTG-TGCTCTAGGTCATGG-TGACTTCCCT-GGAGGTCCACGTC  895
      ||||||||| ||||||||||||||| |||||||||| |||||||||||||
seq2  CAAACCCTGTTGCTCTAGGTCATGGTTGACTTCCCTGGGAGGTCCACGTC  900

seq1  CTTAGAACCAGGCA-TGTTCTTGTA-TGGGAAC-TCTTTTTT---GAGAG  939
      |||||||||||||| |||||||||| ||||||| ||||||||    ||||
seq2  CTTAGAACCAGGCATTGTTCTTGTATTGGGAACTTCTTTTTTTTGAAGAG  950

seq1  -TTTTCCATACCAGGGAAGTGGCCCT-GACCATTCCTGTAGGT  980
       |||||||||| ||| |||||||||| ||||||||||||||||
seq2  TTTTTCCATACAAGGAAAGTGGCCCTGGACCATTCCTGTAGGT  993


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