BAC Information

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BAC

Clone NameB6Ng01-310H02
Chromosome3 (Build37)
Map Location 97,166,579 - 97,167,450
singlet/doubletsinglet
Overlap genenone
Upstream genePafah1b1-ps1, Terc, BC107364, LOC668500, Hfe2, Txnip, Polr3gl, Ankrd34, 6330549D23Rik, Rbm8a, Pex11b, Itga10, Ankrd35, Pias3, Polr3c, Zfp364, Cd160, Pdzk1, Gpr89, Gja8, 9230114J08Rik, Gja5, Acp6, Bcl9
Downstream geneOlfr1402, Chd1l, Fmo5, Prkab2, Pde4dip, Sec22b, EG433632, LOC100042975, Notch2, Adam30, LOC622561, Reg4, Hmgcs2, Phgdh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310H02.bB6Ng01-310H02.g
ACCGA102419GA102420
length9041,185
definitionB6Ng01-310H02.b B6Ng01-310H02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggaatgtacattttgttctgggatggagttgctctatgcagt
gttttattggggggaggaatgatttcttttttattgatggtttcttttga
aacatttttaaattgtatttatgcgtgtgtgtctgtatgtgagagcaaat
gtgaatgtgtatatgcaagagtgtgcttctgtgcaagtgtggagaagaag
agggtgtcttgatcccttgcagttgaatagcacgtatctgcaggatgccc
agtttgttctatggatgccaggatcgacgctctgaccagcacaaccactc
tgcaagtgtttttaactgctgagccagttttccaactcaatgcattttta
aaaggtttgcctattttaatttttaaaaagtttgagtgctatgtagcaat
tatacattttatggggtacagtgttagtaattcaggctatgcctgtaata
ggtacgtacccaaatggagataaatggcattttcattttcttcacatttc
tgatatttgcacttttcaactgccttccttccagattttcataaaatgtg
tgacacattgttatgcgctagtcacctctggggtgctgaatttcagaact
cactactttcatctaaatgtgttttggtggtacctatttttcaacttccc
tcccttcccagctgctaataatcactaagccacattgagatcgaaggcga
ctttagttatgaaaaccgtgtgctgcttacttgtctttttgtatatgagt
ttctttacttaacatgggtgttctccattccattcataactgtgctcttg
acttgcaatgccagaactagatggtagagccttctgttgacgacactgca
tgcttttgggttcagaacatgaagaaatcaagctgggaatgatccgtaag
tgtt
gaattctcacccgagaaatatcgaatggcagagaagcacctgaaaaaatg
ttcaatatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatcctgcaatatctcttctggac
atatatccagaagatgttccaaccagtaagaaggacacatgctctactat
gttcatagcagccttatttataacagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgctaaacgcatgaaactcaa
gaataacgaagaccaaagtgtggacactttgccccttcttagaattggaa
ggagttacagagacaaagtttggaactgagacgaaaggatggaccatcta
gagactgccatatccagggatccatcccataatcagcttccaaacgctga
caccattgcatacactagcaagattttgctgaaaggacccagatatagct
gtctcttgtgagactatgccggggcttagcaaacacagaagtggatgctc
acagtcagctattgggtggatcacagggcccccaatgagagctagagaaa
gtacccaaagagctaaagggatctgcatcctataggtggaacaacattat
gaactaaccagtatccagagctcttgactctagctgcatatgtatcaaaa
gaatgcctagtcgcatcactggaaagaagaggccattgactgccaaactt
tatatggcccagtacagggcatgccactgcacacggaaatggaacggcat
acgggagtagctcatgtatctctacgctgtcactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_97166579_97167450
seq2: B6Ng01-310H02.b_48_925

seq1  GAATTCCAGGAATGTACATTTTGTTCTGGGATGGAGTTGCTCTATGCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAATGTACATTTTGTTCTGGGATGGAGTTGCTCTATGCAGT  50

seq1  GTTTTATTGGGGGGAGGAATGATTTCTTTTTTATTGATGGTTTCTTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTGGGGGGAGGAATGATTTCTTTTTTATTGATGGTTTCTTTTGA  100

seq1  AACATTTTTAAATTGTATTTATGCGTGTGTGTCTGTATGTGAGAGCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTTAAATTGTATTTATGCGTGTGTGTCTGTATGTGAGAGCAAAT  150

seq1  GTGAATGTGTATATGCAAGAGTGTGCTTCTGTGCAAGTGTGGAGAAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGTGTATATGCAAGAGTGTGCTTCTGTGCAAGTGTGGAGAAGAAG  200

seq1  AGGGTGTCTTGATCCCTTGCAGTTGAATAGCACGTATCTGCAGGATGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTCTTGATCCCTTGCAGTTGAATAGCACGTATCTGCAGGATGCCC  250

seq1  AGTTTGTTCTATGGATGCCAGGATCGACGCTCTGACCAGCACAACCACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTTCTATGGATGCCAGGATCGACGCTCTGACCAGCACAACCACTC  300

seq1  TGCAAGTGTTTTTAACTGCTGAGCCAGTTTTCCAACTCAATGCATTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGTGTTTTTAACTGCTGAGCCAGTTTTCCAACTCAATGCATTTTTA  350

seq1  AAAGGTTTGCCTATTTTAATTTTTAAAAAGTTTGAGTGCTATGTAGCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTTGCCTATTTTAATTTTTAAAAAGTTTGAGTGCTATGTAGCAAT  400

seq1  TATACATTTTATGGGGTACAGTGTTAGTAATTCAGGCTATGCCTGTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATTTTATGGGGTACAGTGTTAGTAATTCAGGCTATGCCTGTAATA  450

seq1  GGTACGTACCCAAATGGAGATAAATGGCATTTTCATTTTCTTCACATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACGTACCCAAATGGAGATAAATGGCATTTTCATTTTCTTCACATTTC  500

seq1  TGATATTTGCACTTTTCAACTGCCTTCCTTCCAGATTTTCATAAAATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTTGCACTTTTCAACTGCCTTCCTTCCAGATTTTCATAAAATGTG  550

seq1  TGACACATTGTTATGCGCTAGTCACCTCTGGGGTGCTGAATTTCAGAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACATTGTTATGCGCTAGTCACCTCTGGGGTGCTGAATTTCAGAACT  600

seq1  CACTACTTTCATCTAAATGTGTTTTGGTGGTACCTATTTTTCAACTTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTTTCATCTAAATGTGTTTTGGTGGTACCTATTTTTCAACTTCCC  650

seq1  TCCCTTCCCAGCTGCTAATAATCACTAAGCCACATTGAGATCGAAGGCGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCCCAGCTGCTAATAATCACTAAGCCACATTGAGATCGAAGGCGA  700

seq1  CTTTAGTTATGAAAACCGTGTGCTGCTTACTTGTC-TTTTGTATATGAGT  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTTTAGTTATGAAAACCGTGTGCTGCTTACTTGTCTTTTTGTATATGAGT  750

seq1  TTCTTTACTTAACAT-GGTGTTCTCCATTCCATTCATAACTGTGCTCTTG  798
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTCTTTACTTAACATGGGTGTTCTCCATTCCATTCATAACTGTGCTCTTG  800

seq1  AC-TGC-ATGCCAGAACTAGATGGTAGAGCCTTCTGTTGACGACACTGCA  846
      || ||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCAATGCCAGAACTAGATGGTAGAGCCTTCTGTTGACGACACTGCA  850

seq1  TGCTTT--GGTTCAGAACATGAAGAAAT  872
      ||||||  ||||||||||||||||||||
seq2  TGCTTTTGGGTTCAGAACATGAAGAAAT  878