BAC Information

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BAC

Clone NameB6Ng01-318F05
Chromosome3 (Build37)
Map Location 141,513,000 - 141,514,003
singlet/doubletsinglet
Overlap geneBmpr1b
Upstream gene4930590L14Rik, Pdha2, Unc5c, LOC100039923
Downstream geneGabarapl2-ps3, Pdlim5, Gbp5, Gbp6, Gbp3, Gbp1, Gbp2, EG621605, Ccbl2, Gtf2b, Pkn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318F05.bB6Ng01-318F05.g
ACCGA108246GA108247
length1,007905
definitionB6Ng01-318F05.b B6Ng01-318F05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctggctactgcttctagtaggaaggaagtcaagggggaatag
cttgatttaatgtgtgtgcatgacagggacacagagaagaaaggcaatga
tagataggagcagtgcagtgaggctgccctatcccccaaaggtgccaggc
aggactgtgccaagcggggagcaagggaactacgcattgaagtgcaaatt
tctgacttctttggagactcatgtttttttctgaaaactgtcttatgaga
ggacgctttttatgaagtagacacgtgggaggatgatttgtggagaagag
acatgtggtgttttcctggaagcagcctggaaaaaatggcatgtgatgcc
ttgctagagtagatgcttgagagaacacgtgacgtttgaaaagggtatag
atataacccaacagacagtggacgacatgtgtggtattgctttgccttga
cactctttgctggtcatcatttgtcatgactttatagagagaagcacact
aaaggatttctggtggtgtcccaggggcttcttgcaacttccgtggactc
cggtggattggcagagcctcctgtttcttctgaatggaatgcttggtgct
cattcataaatggtgtttttgagtggatcaaggtagcactgccgattcac
gtgaactggattactaatatcctgacagcacaaattggacttgctccaaa
gacatatttctaagcaggtccgcaccgtcctttgccctattaacctttcc
tttccattacctctggtgggtggtgggttagaagagagattaaagtattt
aagtacacttattaaagtaggatttgaaaaatagaagcctacaattcaca
cagctgggaaatgcatgtttccaccagcttcattcacaacactgtcacat
ggggaaaataaagtttgaattcttacctggcctcatttctcttaggtaag
tcatgatctctctttaatccatgctgattcaatcgctattataaccacct
gccgagt
gaattctagaaatgcttgctctgtctctctctctctgtctccctctctct
ctctgtctatctgtctctctctctctctctctctctctctctctctctct
ctcgctcgcgcgcgcgcgcgcccagtagtcattgatgagagtgattcagt
ttccatgagtttgttggctttctgttgtttctgtggtagttaaaatccag
cttaaacccatggtgatttgattaaatgcaaagggttatttgcatcttct
tgtatctgttcaggctttctttgtgatccaatgatcaatattggagaaga
ttccatgaggtgctgagaagaaggtgtattctttggagtttcggtgaaat
attctatagatatctcttagatctgttaattcataaactgttagtttcat
tatttctttgttaatttctgtctcaatgacgtagccattgttaatagcgt
tgaagtctcccactattaatatgtggagttgaatttattatttaagcttt
agttatattttctttgtgaatgtgggtgcccttgcatttggggcatagct
gtcagaactgagatgtcatcctggtggattttttcctatgttgagtatca
agtgtcctttcccatctcttttaattacttttggttgaaagtctaattta
ttagatattacaatggctactccaggttgtttcttgggtctgtttacttg
gaaaacctctttccagctcctttctctgtggtagtatctattttcgttgc
tgaggtgtgcttcttatatgaagcagaatgatggatcctgtttagtctgt
gccttcttactgggtgaaattgagcccatttgatgttgagagacattaat
gggccagcaaattgttcctttttttcccccaatggtggatggtgtgtttt
gtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_141513000_141514003
seq2: B6Ng01-318F05.b_45_1050

seq1  GAATTCTCCTGGCTACTGCTTCTAGTAGGAAGGAAGTCAAGGGGGAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGGCTACTGCTTCTAGTAGGAAGGAAGTCAAGGGGGAATAG  50

seq1  CTTGATTTAATGTGTGTGCATGACAGGGACACAGAGAAGAAAGGCAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTTAATGTGTGTGCATGACAGGGACACAGAGAAGAAAGGCAATGA  100

seq1  TAGATAGGAGCAGTGCAGTGAGGCTGCCCTATCCCCCAAAGGTGCCAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGGAGCAGTGCAGTGAGGCTGCCCTATCCCCCAAAGGTGCCAGGC  150

seq1  AGGACTGTGCCAAGCGGGGAGCAAGGGAACTACGCATTGAAGTGCAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGTGCCAAGCGGGGAGCAAGGGAACTACGCATTGAAGTGCAAATT  200

seq1  TCTGACTTCTTTGGAGACTCATGTTTTTTTCTGAAAACTGTCTTATGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTTCTTTGGAGACTCATGTTTTTTTCTGAAAACTGTCTTATGAGA  250

seq1  GGACGCTTTTTATGAAGTAGACACGTGGGAGGATGATTTGTGGAGAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGCTTTTTATGAAGTAGACACGTGGGAGGATGATTTGTGGAGAAGAG  300

seq1  ACATGTGGTGTTTTCCTGGAAGCAGCCTGGAAAAAATGGCATGTGATGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGGTGTTTTCCTGGAAGCAGCCTGGAAAAAATGGCATGTGATGCC  350

seq1  TTGCTAGAGTAGATGCTTGAGAGAACACGTGACGTTTGAAAAGGGTATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGAGTAGATGCTTGAGAGAACACGTGACGTTTGAAAAGGGTATAG  400

seq1  ATATAACCCAACAGACAGTGGACGACATGTGTGGTATTGCTTTGCCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACCCAACAGACAGTGGACGACATGTGTGGTATTGCTTTGCCTTGA  450

seq1  CACTCTTTGCTGGTCATCATTTGTCATGACTTTATAGAGAGAAGCACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTTGCTGGTCATCATTTGTCATGACTTTATAGAGAGAAGCACACT  500

seq1  AAAGGATTTCTGGTGGTGTCCCAGGGGCTTCTTGCAACTTCCGTGGACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATTTCTGGTGGTGTCCCAGGGGCTTCTTGCAACTTCCGTGGACTC  550

seq1  CGGTGGATTGGCAGAGCCTCCTGTTTCTTCTGAATGGAATGCTTGGTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGATTGGCAGAGCCTCCTGTTTCTTCTGAATGGAATGCTTGGTGCT  600

seq1  CATTCATAAATGGTGTTTTTGAGTGGATCAAGGTAGCACTGCCGATTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATAAATGGTGTTTTTGAGTGGATCAAGGTAGCACTGCCGATTCAC  650

seq1  GTGAACTGGATTACTAATATCCTGACAGCACAAATTGGACTTGCTCCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACTGGATTACTAATATCCTGACAGCACAAATTGGACTTGCTCCAAA  700

seq1  GACATATTTCTAAGCAGGTCCGCACCGTCCTTTGCCCTATTAACCTTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATTTCTAAGCAGGTCCGCACCGTCCTTTGCCCTATTAACCTTTCC  750

seq1  TTTCCATTACCTCTGGTGGGTGGTGGGTTAGAAGAGAGATTAAAGTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTACCTCTGGTGGGTGGTGGGTTAGAAGAGAGATTAAAGTATTT  800

seq1  AAGTACACTTATTAAAGTAGGATTTGAAAAATAGAAGCCTACAATTCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACACTTATTAAAGTAGGATTTGAAAAATAGAAGCCTACAATTCACA  850

seq1  CAGCTGGGAAATGCATGTTTCCACCAGCTTCATTCACAACACTGTCACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGGAAATGCATGTTTCCACCAGCTTCATTCACAACACTGTCACAT  900

seq1  GGGGAAAATAAAGTTTGAATTCTTACCTGGCCTCA-TTCTCTCAGGGAAG  949
      ||||||||||||||||||||||||||||||||||| |||||| ||| |||
seq2  GGGGAAAATAAAGTTTGAATTCTTACCTGGCCTCATTTCTCTTAGGTAAG  950

seq1  CCA-GACCTCTCTTTTATCCATGCTGATTCAATCCCTATTTATACCACCT  998
       || || |||||||| |||||||||||||||||| |||||   |||||||
seq2  TCATGATCTCTCTTTAATCCATGCTGATTCAATCGCTATTATAACCACCT  1000

seq1  GCCGAG  1004
      ||||||
seq2  GCCGAG  1006