BAC Information

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BAC

Clone NameB6Ng01-318I05
Chromosome3 (Build37)
Map Location 48,420,793 - 48,421,866
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666202, LOC666208, 1700018B24Rik
Downstream geneLOC100039404, EG666230, 4932443G14, LOC545519, LOC676568, LOC666247, LOC100039579
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318I05.bB6Ng01-318I05.g
ACCGA108382GA108383
length1,0701,039
definitionB6Ng01-318I05.b B6Ng01-318I05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatacaatataaaaaaataagctatcaagccatctgtcagtgaga
tcttggtacttaaaaggacgtctcttttcttgacacttgtacatctctcc
cacttctcatatgctgctctgaatttgacagctgcatgggtgattagatc
cttcacctgtgaaattcaaattccaaatgcttaatatatcacttttacct
aaaataatatagagaaatggaaaggctatctatatttatacagcatatat
ttatatattggtggtttatcttgttgtcagggcacaaaagaagcctcaat
atgtcataagcattttagagacaatttatggctttaatatttcaatattt
aaagatatatacataatttaagttacagctatccaccagtggtaagtttt
atatttctatgaaagacctttttaataaaatcaagtacaattttattttc
acaggctacctatttttattttattttgaaggtttattcatctttatttt
tatgtgtgtgagaactttgcctgtgtatatctgtgcactgcatgtgggca
tcatgctcaaggaggcaagaagagagtgtcatattccctgagatggaaat
tacagatgattttgagcaacatttgcttgattagaatcgagcctgggtcc
cctggatgtaactaaccaccgagcagtgtctccatctttctacttaaaaa
tgttctgcattggtaactttcatataacaatataaataaattgtatatag
ctcagaagtctagcttcaaggcttcttttttctgtgtgtgttgaagacag
aaaataacctcttaatgatatcaatgagtaaacatatacaactagcaaaa
ataagccaaataccacatttgtcccaaaagtaggcccttgatattttttc
tatattccttattcaaaagcagatgttgtcaaggttttactgtgtaaata
aaagcacataacctatttattatttattatgggttttttttgaagaacag
ggtttctctgtgtagcctggctgtctgaactcacttgtagaacaagcctg
gcttcgaactcagaaatctg
gaattcactggaatgctttaaatggggcctaatgggtcatcctagtagga
atatggaagactttgttgctgggagtaatttgaactgtgttgaccgggcc
ttcctgagattttaagggagaaaaatttcagtatgtggcataaagactgt
tttttgtggtattttggtaaagaatgtggctgctttttgcccttatctga
aaagtttgcctgaggctaaggtgaagagacttggattaattgcattgaca
aaggaagtttcaaaaaagcccagcagagactttgttctctggttaaatct
cacaaagagaagtttgaacaagcatagcaagcttagaaaggccaaatata
aaatatatggttcgagtattaaaggcataccaggaagtgaaatacagcaa
aatcctgtgttctaggaaataacagattaaaggaggggggccttggggca
agatcatacccaacttaatttagatccaggcatggtggtatacaccttta
atcccatgagacacgcatgctgatctctgcattcaaggtcaatctataag
caagatccaggatagccaagcttgggcagtgaaggagttagaaaggagtg
gagatctgaagactgctttgacatcagccatggagatgcagagtttggag
tttgcccagttggtttcctgccttgctttggagaatacagttaattagtt
ggatgaatctcagaagagtccttgaactttagacttttaacattgttgag
actgctatagactatgagaactttgaaagttggactaaatgcatttgcat
tacgctatttttaagtatggcccccatagactcatgtttttgaacaagtc
tatgagggccagggagtggaatgtgatggtttgtatattcttggaccagg
gagtggcaccatttggaggtttgggccttgttggaatagttgtgacctgt
taggagtaggtgtgtcactgtggggtgtgggcttaagactctcaacccct
agtttgcctggtagttcaagtcttcatcctagcttgcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_48420793_48421866
seq2: B6Ng01-318I05.b_49_1118 (reverse)

seq1  CAGATTTCTGAGTTCGAAGCCA-GCCTGGTCTACAAAGTGAGTTCCAGGA  49
      |||||||||||||||||||||| || || ||||| ||||||||||   ||
seq2  CAGATTTCTGAGTTCGAAGCCAGGCTTGTTCTAC-AAGTGAGTTC--AGA  47

seq1  CAGCCAGGGCTACACAGAGAAACCCTGT--CTCAAAAAAACCCAATAAAT  97
      |||||| |||||||||||||||||||||   ||||||||| || || |||
seq2  CAGCCA-GGCTACACAGAGAAACCCTGTTCTTCAAAAAAAACCCAT-AAT  95

seq1  AAATAAATAAATAAGGTTATGTGCTTTTATTTACACAGTAAAACCTTGAC  147
      |||| ||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAAT-AATAAAT-AGGTTATGTGCTTTTATTTACACAGTAAAACCTTGAC  143

seq1  AACATCTGCTTTTGAATAAGGAATATAGAAAAAATATCAAGGGCCTACTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTGCTTTTGAATAAGGAATATAGAAAAAATATCAAGGGCCTACTT  193

seq1  TTGGGACAAATGTGGTATTTGGCTTATTTTTGCTAGTTGTATATGTTTAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGACAAATGTGGTATTTGGCTTATTTTTGCTAGTTGTATATGTTTAC  243

seq1  TCATTGATATCATTAAGAGGTTATTTTCTGTCTTCAACACACACAGAAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGATATCATTAAGAGGTTATTTTCTGTCTTCAACACACACAGAAAA  293

seq1  AAGAAGCCTTGAAGCTAGACTTCTGAGCTATATACAATTTATTTATATTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCCTTGAAGCTAGACTTCTGAGCTATATACAATTTATTTATATTG  343

seq1  TTATATGAAAGTTACCAATGCAGAACATTTTTAAGTAGAAAGATGGAGAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGAAAGTTACCAATGCAGAACATTTTTAAGTAGAAAGATGGAGAC  393

seq1  ACTGCTCGGTGGTTAGTTACATCCAGGGGACCCAGGCTCGATTCTAATCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCGGTGGTTAGTTACATCCAGGGGACCCAGGCTCGATTCTAATCA  443

seq1  AGCAAATGTTGCTCAAAATCATCTGTAATTTCCATCTCAGGGAATATGAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATGTTGCTCAAAATCATCTGTAATTTCCATCTCAGGGAATATGAC  493

seq1  ACTCTCTTCTTGCCTCCTTGAGCATGATGCCCACATGCAGTGCACAGATA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTTCTTGCCTCCTTGAGCATGATGCCCACATGCAGTGCACAGATA  543

seq1  TACACAGGCAAAGTTCTCACACACATAAAAATAAAGATGAATAAACCTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGGCAAAGTTCTCACACACATAAAAATAAAGATGAATAAACCTTC  593

seq1  AAAATAAAATAAAAATAGGTAGCCTGTGAAAATAAAATTGTACTTGATTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAATAAAAATAGGTAGCCTGTGAAAATAAAATTGTACTTGATTT  643

seq1  TATTAAAAAGGTCTTTCATAGAAATATAAAACTTACCACTGGTGGATAGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAAGGTCTTTCATAGAAATATAAAACTTACCACTGGTGGATAGC  693

seq1  TGTAACTTAAATTATGTATATATCTTTAAATATTGAAATATTAAAGCCAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTTAAATTATGTATATATCTTTAAATATTGAAATATTAAAGCCAT  743

seq1  AAATTGTCTCTAAAATGCTTATGACATATTGAGGCTTCTTTTGTGCCCTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTCTCTAAAATGCTTATGACATATTGAGGCTTCTTTTGTGCCCTG  793

seq1  ACAACAAGATAAACCACCAATATATAAATATATGCTGTATAAATATAGAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAGATAAACCACCAATATATAAATATATGCTGTATAAATATAGAT  843

seq1  AGCCTTTCCATTTCTCTATATTATTTTAGGTAAAAGTGATATATTAAGCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTCCATTTCTCTATATTATTTTAGGTAAAAGTGATATATTAAGCA  893

seq1  TTTGGAATTTGAATTTCACAGGTGAAGGATCTAATCACCCATGCAGCTGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATTTGAATTTCACAGGTGAAGGATCTAATCACCCATGCAGCTGT  943

seq1  CAAATTCAGAGCAGCATATGAGAAGTGGGAGAGATGTACAAGTGTCAAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCAGAGCAGCATATGAGAAGTGGGAGAGATGTACAAGTGTCAAGA  993

seq1  AAAGAGACGTCCTTTTAAGTACCAAGATCTCACTGACAGATGGCTTGATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGACGTCCTTTTAAGTACCAAGATCTCACTGACAGATGGCTTGATA  1043

seq1  GCTTATTTTTTTATATTGTATGAATTC  1074
      |||||||||||||||||||||||||||
seq2  GCTTATTTTTTTATATTGTATGAATTC  1070