BAC Information

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BAC

Clone NameB6Ng01-318K12
Chromosome3 (Build37)
Map Location 39,679,693 - 39,680,824
singlet/doubletsinglet
Overlap genenone
Upstream geneFat4, LOC100041432, LOC100040853, LOC100041443
Downstream geneLOC100041458, LOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318K12.bB6Ng01-318K12.g
ACCGA108486GA108487
length1,135488
definitionB6Ng01-318K12.b B6Ng01-318K12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactggatacatagaataactgacacaatgtgggaaacagcagac
attcagtggcttctttgcttctgtgaccagctgtgaacagtagactgtga
acaaattgagacctatatgaaataccgtgtgcgggagaaagaagccagga
aaacaaaataataatatttcactgaatttattcacaagctagcctaacac
tatctgagtctcttagcttccataattaggagaaagaagcattagaatat
gtggtagggtagatccaggagctctgaaacaaaattctaggaggagtgtc
agccatcaaatatcagtatgcttagcaagacagagtattctagcaaggaa
agtcctgcagtcacccaagacactattcaaggaaagctctaaacaaattt
agaagaatcctttaaaagatgattatgatgagtccacagagaaaataatt
tgtggaaagttctgctttaccacacacgtgccagccatatcaactaccgg
agaaaataggcaactcacacaagtgaactggtgggctctggcagtgtttg
cctgcatggttgttaactcatttttcctgtatctgcacaacgagccttga
caatacagatggtgttgcataacctttcagtcccaaacaaatgaactaat
aatgcaagacacgatgagagagctatccggttactgaattgttgcagaat
agttccaatagcatctgattctcctatatttagacagtagctccaaattt
ctaattgccaattaataaaatgtaaattgcttttgacaaattaatgctat
actacactattatacaacatatggagatattatcaaattaacaaaatcta
tcatttaaaatatagtaatgaaatatataatttgcttctgataataaaag
ctctagtattagaaaatttaataaatgggagatcatgccaattcaaagaa
agaaaaaaaatgaacaaggtagagttttctcttagcatccacaggccgtg
ggggacagccccagagttgtgtgatgtttttgtttatcagataggtggag
attttttttcattagacttgagcttgcctcaacaaagcctcattatattt
gcattcaaagagagagtgaatatcttatgatacat

agttatctttcttttattctttctcccttcctttcattgtgtcattctct
gtcttttttccccacttaacagctttgttaactttctttttttttctctt
tttttagttggatagtttctttatttacatttcaaatgttattctctttc
ccagtcctcccctgaaactctttatcccataccccttctcctgcttctat
gatacattcccccacccacctccctgacctagcattccccaacattaggg
catcaagcctttacaagtccaaaggcctcttctcccactgatgcccaaca
aggctatcctctgctacatgttcagctgtagcaatggttcccttgcacgg
ctactctttggttggtttcctgggagctcttggggggtgggggtgtctgg
ttggttagtatggttattcttcctatgaggttgcaaaccccttcagttcc
tttagttttatctctaactcctccattgaggaccccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_39679693_39680824
seq2: B6Ng01-318K12.b_47_1181

seq1  GAATTCACTGGATACATAGAATAACTGACACAATGTGGGAAACAGCAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGATACATAGAATAACTGACACAATGTGGGAAACAGCAGAC  50

seq1  ATTCAGTGGCTTCTTTGCTTCTGTGACCAGCTGTGAACAGTAGACTGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTGGCTTCTTTGCTTCTGTGACCAGCTGTGAACAGTAGACTGTGA  100

seq1  ACAAATTGAGACCTATATGAAATACCGTGTGCGGGAGAAAGAAGCCAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTGAGACCTATATGAAATACCGTGTGCGGGAGAAAGAAGCCAGGA  150

seq1  AAACAAAATAATAATATTTCACTGAATTTATTCACAAGCTAGCCTAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAATAATAATATTTCACTGAATTTATTCACAAGCTAGCCTAACAC  200

seq1  TATCTGAGTCTCTTAGCTTCCATAATTAGGAGAAAGAAGCATTAGAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAGTCTCTTAGCTTCCATAATTAGGAGAAAGAAGCATTAGAATAT  250

seq1  GTGGTAGGGTAGATCCAGGAGCTCTGAAACAAAATTCTAGGAGGAGTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAGGGTAGATCCAGGAGCTCTGAAACAAAATTCTAGGAGGAGTGTC  300

seq1  AGCCATCAAATATCAGTATGCTTAGCAAGACAGAGTATTCTAGCAAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCAAATATCAGTATGCTTAGCAAGACAGAGTATTCTAGCAAGGAA  350

seq1  AGTCCTGCAGTCACCCAAGACACTATTCAAGGAAAGCTCTAAACAAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGCAGTCACCCAAGACACTATTCAAGGAAAGCTCTAAACAAATTT  400

seq1  AGAAGAATCCTTTAAAAGATGATTATGATGAGTCCACAGAGAAAATAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAATCCTTTAAAAGATGATTATGATGAGTCCACAGAGAAAATAATT  450

seq1  TGTGGAAAGTTCTGCTTTACCACACACGTGCCAGCCATATCAACTACCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAAGTTCTGCTTTACCACACACGTGCCAGCCATATCAACTACCGG  500

seq1  AGAAAATAGGCAACTCACACAAGTGAACTGGTGGGCTCTGGCAGTGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATAGGCAACTCACACAAGTGAACTGGTGGGCTCTGGCAGTGTTTG  550

seq1  CCTGCATGGTTGTTAACTCATTTTTCCTGTATCTGCACAACGAGCCTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATGGTTGTTAACTCATTTTTCCTGTATCTGCACAACGAGCCTTGA  600

seq1  CAATACAGATGGTGTTGCATAACCTTTCAGTCCCAAACAAATGAACTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAGATGGTGTTGCATAACCTTTCAGTCCCAAACAAATGAACTAAT  650

seq1  AATGCAAGACACGATGAGAGAGCTATCCGGTTACTGAATTGTTGCAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAGACACGATGAGAGAGCTATCCGGTTACTGAATTGTTGCAGAAT  700

seq1  AGTTCCAATAGCATCTGATTCTCCTATATTTAGACAGTAGCTCCAAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAATAGCATCTGATTCTCCTATATTTAGACAGTAGCTCCAAATTT  750

seq1  CTAATTGCCAATTAATAAAATGTAAATTGCTTTTGACAAATTAATGCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGCCAATTAATAAAATGTAAATTGCTTTTGACAAATTAATGCTAT  800

seq1  ACTACACTATTATACAACATATGGAGATATTATCAAATTAACAAAATCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACTATTATACAACATATGGAGATATTATCAAATTAACAAAATCTA  850

seq1  TCATTTAAAATATAGTAATGAAATATATAATTTGCTTCTGATAATAAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAAAATATAGTAATGAAATATATAATTTGCTTCTGATAATAAAAG  900

seq1  CTCTAGTATTAGAAAA-TTAATAAAT-GGAGATCATGCCAATTCAAAGAA  948
      |||||||||||||||| ||||||||| |||||||||||||||||||||||
seq2  CTCTAGTATTAGAAAATTTAATAAATGGGAGATCATGCCAATTCAAAGAA  950

seq1  AG-AAAAAAATGAACAAGGTAGAGTTTTCTCTTAGCATCCACAGGCCGT-  996
      || |||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGAAAAAAAATGAACAAGGTAGAGTTTTCTCTTAGCATCCACAGGCCGTG  1000

seq1  GGGGACAGCCCCAGAGGTTGTGTGATG-TTTTGTTTATCAGAATAAGGTG  1045
      ||||||||||||||| ||||||||||| ||||||||||||||   |||||
seq2  GGGGACAGCCCCAGA-GTTGTGTGATGTTTTTGTTTATCAGA--TAGGTG  1047

seq1  GAGA-TTTTTTTCATTAGACTTGAGCTTTGCCTCAACAAAG-CTCATTAT  1093
      |||| ||||||||||||||||||||| |||||||||||||| ||||||||
seq2  GAGATTTTTTTTCATTAGACTTGAGC-TTGCCTCAACAAAGCCTCATTAT  1096

seq1  A-TTGCAATTTCA---AGAGAGTGAAATTATC-TATGATTACAT  1132
      | |||||  ||||   ||||||||||  |||| ||||| |||||
seq2  ATTTGCA--TTCAAAGAGAGAGTGAA--TATCTTATGA-TACAT  1135


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