BAC Information

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BAC

Clone NameB6Ng01-319F05
Chromosome3 (Build37)
Map Location 49,165,156 - 49,165,891
singlet/doubletsinglet
Overlap gene4932443G14
Upstream gene1700018B24Rik, LOC100039404, EG666230
Downstream geneLOC545519, LOC676568, LOC666247, LOC100039579, LOC100039587, LOC638779, Pcdh18, LOC100039628, LOC639469
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319F05.bB6Ng01-319F05.g
ACCGA108983GA108984
length1,1771,091
definitionB6Ng01-319F05.b B6Ng01-319F05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttatgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgctggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggctttcccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcac
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacttccttagttagagtcacgcccaagatattttatatta
ttgtgactattgagaagggtgttgtttcctaatttctttctcagcctgtt
tattctttgtgtagagaaaggccatgacttgtttgaataatttattatcc
agcctacctcacgaagctgtttatcagttaggagttcttctggtggattt
agggtcacttataattactaatcgattcatctgcaaaggtaagtttgaac
tcctcctttccaatggtaatccaccct

gaattcagtaagaatgttccctattcattaacattcaaattcacttctag
tagagacagggaaaatgattaggaattacaatttacttgaacagagctag
aaaagctcagggctaggctgcatagtaattacttaggacaaaactgagtc
acacccaaacacgtgaataaacaatggcctagcaaataggtgggttgtcg
catgaaaagtttaatagaagtgaattcccctggtgcaggtttttttcact
aggcccagaggaatagcatagtcaggtatttactaaaaccacctggtggt
gggtttaacagagactagcattgtatcagagcattcaccaggcgcctgtg
tttagctaatcctaattaggaataggaacctattctcagttgtaaacaag
gcctggctcctgccatctttttatgtatatattttctttgttgtgtgtta
agaaccagtgtaccttgaagtttgtatttgcttagtcttcttctttttct
tctgtattaaaagtctggtgtttgcttggaacaatacattcagattcagc
actcccttgagtctgtgtccatttgtcacccttttctcaccaactctttt
cccatctgtctgaaaggctgatttgccacagattgagagaggctgactgg
gccagtctgtggcagttttcagtctccctagtcctgtgacattaatacag
ttcatcatgctgtggtcatccctaactatgacatcattttggtgatattt
tataactaaaattttgctactgtaaggaattgtaatgtgtaatgtatagg
atatctgaaatgccggataagtgattcccaaaagtattgtgacacacaag
ttgagaatcacttgtctaaactgctatttttaaacaaagctatttctcaa
atactttctacaatgtacattgaccattaattttcttggttttttgtaag
actgtattagaaataataaaagaaagcttgccctgctctacttatatgag
attgggattagcatactcgacgagatctcttcttgcaaaatgttttgtta
tacaacgtaaatcttgggaactgcacaaagtagagctatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_49165156_49165891
seq2: B6Ng01-319F05.g_432_1158

seq1  ATTAGGAATAGGAACCTATTCTCAGTTGTAAACAAGGCCTGGCTCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAATAGGAACCTATTCTCAGTTGTAAACAAGGCCTGGCTCCTGCC  50

seq1  ATCTTTTTATGTATATATTTTCTTTGTTGTGTGTTAAGAACCAGTGTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTATGTATATATTTTCTTTGTTGTGTGTTAAGAACCAGTGTACC  100

seq1  TTGAAGTTTGTATTTGCTTAGTCTTCTTCTTTTTCTTCTGTATTAAAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTTTGTATTTGCTTAGTCTTCTTCTTTTTCTTCTGTATTAAAAGT  150

seq1  CTGGTGTTTGCTTGGAACAATACATTCAGATTCAGCACTCCCTTGAGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTTTGCTTGGAACAATACATTCAGATTCAGCACTCCCTTGAGTCT  200

seq1  GTGTCCATTTGTCACCCTTTTCTCACCAACTCTTTTCCCATCTGTCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCATTTGTCACCCTTTTCTCACCAACTCTTTTCCCATCTGTCTGAA  250

seq1  AGGCTGATTTGCCACAGATTGAGAGAGGCTGACTGGGCCAGTCTGTGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGATTTGCCACAGATTGAGAGAGGCTGACTGGGCCAGTCTGTGGCA  300

seq1  GTTTTCAGTCTCCCTAGTCCTGTGACATTAATACAGTTCATCATGCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGTCTCCCTAGTCCTGTGACATTAATACAGTTCATCATGCTGTG  350

seq1  GTCATCCCTAACTATGACATCATTTTGGTGATATTTTATAACTAAAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCCTAACTATGACATCATTTTGGTGATATTTTATAACTAAAATTT  400

seq1  TGCTACTGTAAGGAATTGTAATGTGTAATGTATAGGATATCTGAAATGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTGTAAGGAATTGTAATGTGTAATGTATAGGATATCTGAAATGCC  450

seq1  GGATAAGTGATTCCCAAAAGTATTGTGACACACAAGTTGAGAATCACTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAGTGATTCCCAAAAGTATTGTGACACACAAGTTGAGAATCACTTG  500

seq1  TCTAAACTGCTATTTTTAAACAAAGCTATTTCTCAAATACTTTCTACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACTGCTATTTTTAAACAAAGCTATTTCTCAAATACTTTCTACAAT  550

seq1  GTACATTGACCATTAATTTTCTTGGTTTTTTGTAAGGACTGTATTAGAAA  600
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTACATTGACCATTAATTTTCTTGGTTTTTTGTAA-GACTGTATTAGAAA  599

seq1  T-ATAAAAGAAAGCTTGCCCTGCTCCTACTTATATGAAGATT-GGATTAG  648
      | |||||||||||||||||||||| ||||||||||| ||||| |||||||
seq2  TAATAAAAGAAAGCTTGCCCTGCT-CTACTTATATG-AGATTGGGATTAG  647

seq1  CATACTCGACGAAGAATCTCTTCTTGCAAAAATGTCTGTTATACAAAGGT  698
      ||||||||||||   ||||||||||||||||   | |||||||||| |  
seq2  CATACTCGACGA--GATCTCTTCTTGCAAAATGTTTTGTTATACAACG--  693

seq1  AAAATCTTTGGGGAACTGCACAAAGGTAGAAGCTATTA  736
       |||||||  |||||||||||||| |||| ||||||||
seq2  TAAATCTT--GGGAACTGCACAAA-GTAG-AGCTATTA  727


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