BAC Information

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BAC

Clone NameB6Ng01-322O05
Chromosome3 (Build37)
Map Location 45,307,100 - 45,308,228
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC676484, LOC100039296, Pcdh10, LOC100039282
Downstream geneLOC433580, LOC671801, EG241989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322O05.bB6Ng01-322O05.g
ACCGA111611GA111612
length1,0561,113
definitionB6Ng01-322O05.b B6Ng01-322O05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgtaaatcaaaacaaccctgagat
tccaccccacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctgcatttttggtg
ggattgcaagcttatacaatcactctgaaaatcagtctggtggttcctca
gaaaattgaacagagtactacaggaggatcccgcaatacctctcctgggc
atatatccagaagatgttccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagaa
gcctctcaacagaggaatggatacagaaaatgtggttcatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ctagaatacccaagatataagatacaatttgctaaacgcataaaactcaa
gaagaacgaagactaaaatgtggacactttgccccttcttagaattggga
acaaaacacccatggaaggagttacagagacacagtttggagctgaaaca
aaaggacgaaccatctagagaatgccatatccggggatccatcctataat
cagcctcccaatggaggccctgtgaaagtaaccaaggagctaaagggatc
tacaaccctatgggtagaacaacaatatgaactacccagcccccccgccc
ccccccccccgagctcgtgtctctagctgcatatgtatccgaagatggcc
tagcgaccatcagtgggaaagagaggcccattggtcatgcaaactttatt
ctgcctctgtaacaggggaacaaccaggaccaagaagttggagttgtttg
gtggaa
gaattccctgtacccacataatgaaagtgaggcctgaaaatttcactcca
atctccttacatttgtcatggcaaggggacatatacatatgcatcaatca
atcaaacaatcaatgaatacatgaaagtactatttaatcatttttaagag
aaaacataaaaactacataacctagcatagtaatgacttggcagagattt
acttgttttgctaaattaaacaattaatttaggattatatcctttgaaat
attttttggagaatttacttaccctaattttgaagtcattttatatacta
agataataaaaaatgcatgcatgaaatgcagctttaaaaatatcattatg
taatctctttttaaatttaaaatatttgaacctctctcaaactaggccag
caaactgatcctcagaaataatgcagcaaagacttattcaagatgaaaga
taatgccccaaacttgcctgcttctgaccattagaaggttttgatcactt
ttcttctcatgtttgataaagaaggcaagaacactaattaggcttttcac
tgtacctttctttatacacaactacacacacacacacacacatacacaca
caaaacactagatcttaggaaatgtgtttgatcagacgaactgatttaaa
ataaatttcagtgaacactgatggaatattttaaaggccataaatataac
acccaataaattttaaattttccttaagtttgcatgatttcaataaggaa
atgtaaaagtatactaaggcaatatacacttggcaagtatattgacaata
tcagtactgtttttaattaattaatcaataagaggttgttaatttcattg
gtggaaataccaaattatttaaaatatcttaaacgaatgatagtggcagt
gttactacagaactttagtgtttaattctttaggttaggttagtggtaag
atatatatcacagtgtttaagagcagacaggactcattttcttgtgtttc
actttatatatataaatgtcatgtactttctatgatgaacacaagcattt
gaatatcaaatctcaaagaaaattgttcatagtgatgataattacaagaa
ctagatcttttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_45307100_45308228
seq2: B6Ng01-322O05.g_71_1183 (reverse)

seq1  TGAAAAGATCCTAGTTTCTTGTAATTTATCATCACTATGACCATTTTTCT  50
      ||||||||| |||| ||||||||| ||||||||||||||| || ||||| 
seq2  TGAAAAGAT-CTAG-TTCTTGTAA-TTATCATCACTATGAACAATTTTC-  46

seq1  TTTGAGATTTTGATATTTAAAATGCTTTGTGTTCCATCCATAGAAAGTAC  100
      ||||||| ||||||| || |||||| ||||||| ||| ||||||||||||
seq2  TTTGAGA-TTTGATA-TTCAAATGC-TTGTGTT-CAT-CATAGAAAGTAC  91

seq1  AATGAACATTTATTATAATAT-TAAAGTGAAACACAAGAAAATTGAAGTC  149
       ||| ||||||||    |||| |||||||||||||||||||||   ||||
seq2  -ATG-ACATTTAT----ATATATAAAGTGAAACACAAGAAAAT--GAGTC  133

seq1  CTGTCTGCTCTTAAACACTGTGATATATATCTTACCACTAACCTAACCTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGCTCTTAAACACTGTGATATATATCTTACCACTAACCTAACCTA  183

seq1  AAGAATTAAACACTAAAGTTCTGTAGTAACACTGCCACTATCATTCGTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTAAACACTAAAGTTCTGTAGTAACACTGCCACTATCATTCGTTT  233

seq1  AAGATATTTTAAATAATTTGGTATTTCCACCAATGAAATTAACAACCTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTTTAAATAATTTGGTATTTCCACCAATGAAATTAACAACCTCT  283

seq1  TATTGATTAATTAATTAAAAACAGTACTGATATTGTCAATATACTTGCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATTAATTAATTAAAAACAGTACTGATATTGTCAATATACTTGCCA  333

seq1  AGTGTATATTGCCTTAGTATACTTTTACATTTCCTTATTGAAATCATGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATATTGCCTTAGTATACTTTTACATTTCCTTATTGAAATCATGCA  383

seq1  AACTTAAGGAAAATTTAAAATTTATTGGGTGTTATATTTATGGCCTTTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAGGAAAATTTAAAATTTATTGGGTGTTATATTTATGGCCTTTAA  433

seq1  AATATTCCATCAGTGTTCACTGAAATTTATTTTAAATCAGTTCGTCTGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCCATCAGTGTTCACTGAAATTTATTTTAAATCAGTTCGTCTGAT  483

seq1  CAAACACATTTCCTAAGATCTAGTGTTTTGTGTGTGTATGTGTGTGTGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACATTTCCTAAGATCTAGTGTTTTGTGTGTGTATGTGTGTGTGTG  533

seq1  TGTGTGTAGTTGTGTATAAAGAAAGGTACAGTGAAAAGCCTAATTAGTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTAGTTGTGTATAAAGAAAGGTACAGTGAAAAGCCTAATTAGTGT  583

seq1  TCTTGCCTTCTTTATCAAACATGAGAAGAAAAGTGATCAAAACCTTCTAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCTTCTTTATCAAACATGAGAAGAAAAGTGATCAAAACCTTCTAA  633

seq1  TGGTCAGAAGCAGGCAAGTTTGGGGCATTATCTTTCATCTTGAATAAGTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAGAAGCAGGCAAGTTTGGGGCATTATCTTTCATCTTGAATAAGTC  683

seq1  TTTGCTGCATTATTTCTGAGGATCAGTTTGCTGGCCTAGTTTGAGAGAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGCATTATTTCTGAGGATCAGTTTGCTGGCCTAGTTTGAGAGAGG  733

seq1  TTCAAATATTTTAAATTTAAAAAGAGATTACATAATGATATTTTTAAAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATATTTTAAATTTAAAAAGAGATTACATAATGATATTTTTAAAGC  783

seq1  TGCATTTCATGCATGCATTTTTTATTATCTTAGTATATAAAATGACTTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTCATGCATGCATTTTTTATTATCTTAGTATATAAAATGACTTCA  833

seq1  AAATTAGGGTAAGTAAATTCTCCAAAAAATATTTCAAAGGATATAATCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGGGTAAGTAAATTCTCCAAAAAATATTTCAAAGGATATAATCCT  883

seq1  AAATTAATTGTTTAATTTAGCAAAACAAGTAAATCTCTGCCAAGTCATTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATTGTTTAATTTAGCAAAACAAGTAAATCTCTGCCAAGTCATTA  933

seq1  CTATGCTAGGTTATGTAGTTTTTATGTTTTCTCTTAAAAATGATTAAATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTAGGTTATGTAGTTTTTATGTTTTCTCTTAAAAATGATTAAATA  983

seq1  GTACTTTCATGTATTCATTGATTGTTTGATTGATTGATGCATATGTATAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTCATGTATTCATTGATTGTTTGATTGATTGATGCATATGTATAT  1033

seq1  GTCCCCTTGCCATGACAAATGTAAGGAGATTGGAGTGAAATTTTCAGGCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCTTGCCATGACAAATGTAAGGAGATTGGAGTGAAATTTTCAGGCC  1083

seq1  TCACTTTCATTATGTGGGTACAGGGAATTC  1129
      ||||||||||||||||||||||||||||||
seq2  TCACTTTCATTATGTGGGTACAGGGAATTC  1113