BAC Information

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BAC

Clone NameB6Ng01-323C11
Chromosome3 (Build37)
Map Location 11,622,491 - 11,623,570
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670564, LOC383826, EG667978
Downstream geneLOC667999, EG621965
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323C11.bB6Ng01-323C11.g
ACCGA111808GA111809
length1,084853
definitionB6Ng01-323C11.b B6Ng01-323C11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccagttgtagcgacacgggttttgccatttcacaatgtgcacca
gtatcacatttctctgagggtatttgtaaatgttaagaaaagcaagaaag
ctcttagtcagacattctagtctctcagcttcacatcataaatttactaa
attggattaaaaatctctatttacagtttaatccatgacttgattgaata
aacacctaatgtataccaaattttagatgagtagcttggtcttgaattaa
caacaggtgaaatgatttgggtttctttccttaagggaacaaaaataaca
gaatatcaatgttggagttgcagccaaagtttgaaaatattgcataattt
taatttcatttttcaaatatttgtatgttgaattattttgtcccgtttca
caataaggtataaaagttttaatgaattttaaattaattatgccataaat
attgtgtatgatctatagtttctacttttgttatttcggtgatattttgt
attcatttatttatttttatttctaaattttaattatatatatatgtata
tatattcattgtacacaatactctgttagaaaaacattttcttttcattg
gtacacacctctgttcaaattcctgaccctctgtctataatccctttctc
atagcatacctgatcctgctcccctttcctccctccctcttttctcttcc
tcccaagtccaccctctatctcccttgagtattttgttccccgtctaaga
agttacctcttcctttttcttgacctgcatgtggtgtgtaattgtatctt
gggtatttcgagcttttgggctaatatccacttaaaagtgaatgcatggc
atgtgtcttcttttgtgactgggttacctcacacaagatgatatcttcta
gttccatcaatttgcttaagaatttcatgaagtcgttatttttagtagat
gagtagtactccattgtgtaaacataccatattttctgtatccattctct
gctgaagacatctgggttcttttcagcttctggcttattaataaataagg
cttgctattgaacatagtagagcatggtgtcatt

gaattctcagcagagcaatttcaaatggccaaaaagcacttaaggaggta
tgtgatgtagaacagtcagagggtggactaagaggagcataaaacctgga
ctgtacaaaaagtttaaataaaattaaaacaagaaagaaaaagaaatgtt
tatcatccttagccaccatggaaatacaaatcaaaaacactttgagtgtc
tatctcacactgctctggtaaaaattccaaacaactggaacacttctcca
ttgataatggtagtgcaaaatcgtacatttactttgaaaaccaatattac
atattgttaaaaataattgagaaccaatctactcaatacccacctatttc
agttttgggcatataacccaaagatgctccattataccaaaagtacactt
gcacatttatattcatagtggttttggtggtttgaatatgcttggtccag
ggagtggcactattaggatgtgtagccttgttgtaggaaatgtgtcattg
ttggggtgggcaatgagaccctcttcgtaaccacataagagccagtcttc
ttctatcagccttcagatgaagatatagaacttgcagctactcgagcccc
atgcccgcctagacaccgccatgttcctgccttgatcatgatggaccaaa
cctctgatatactcatttataagtatgtattaattgctaaataaatgata
accacgctacaattcacagatccagagagacctagttttattgcaccttt
ttagtccatgttcaattgagttccttggaagcccttctcttttctgaagg
gaaacagaagttgagtggaactgtagggagaagtgaggtggggtaaaggg
aat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_11622491_11623570
seq2: B6Ng01-323C11.b_50_1133

seq1  GAATTCCCAGTTGTAGCGACACGGGTTTTGCCATTTCACAATGTGCACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGTTGTAGCGACACGGGTTTTGCCATTTCACAATGTGCACCA  50

seq1  GTATCACATTTCTCTGAGGGTATTTGTAAATGTTAAGAAAAGCAAGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCACATTTCTCTGAGGGTATTTGTAAATGTTAAGAAAAGCAAGAAAG  100

seq1  CTCTTAGTCAGACATTCTAGTCTCTCAGCTTCACATCATAAATTTACTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGTCAGACATTCTAGTCTCTCAGCTTCACATCATAAATTTACTAA  150

seq1  ATTGGATTAAAAATCTCTATTTACAGTTTAATCCATGACTTGATTGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATTAAAAATCTCTATTTACAGTTTAATCCATGACTTGATTGAATA  200

seq1  AACACCTAATGTATACCAAATTTTAGATGAGTAGCTTGGTCTTGAATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTAATGTATACCAAATTTTAGATGAGTAGCTTGGTCTTGAATTAA  250

seq1  CAACAGGTGAAATGATTTGGGTTTCTTTCCTTAAGGGAACAAAAATAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGTGAAATGATTTGGGTTTCTTTCCTTAAGGGAACAAAAATAACA  300

seq1  GAATATCAATGTTGGAGTTGCAGCCAAAGTTTGAAAATATTGCATAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCAATGTTGGAGTTGCAGCCAAAGTTTGAAAATATTGCATAATTT  350

seq1  TAATTTCATTTTTCAAATATTTGTATGTTGAATTATTTTGTCCCGTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCATTTTTCAAATATTTGTATGTTGAATTATTTTGTCCCGTTTCA  400

seq1  CAATAAGGTATAAAAGTTTTAATGAATTTTAAATTAATTATGCCATAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGGTATAAAAGTTTTAATGAATTTTAAATTAATTATGCCATAAAT  450

seq1  ATTGTGTATGATCTATAGTTTCTACTTTTGTTATTTCGGTGATATTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTATGATCTATAGTTTCTACTTTTGTTATTTCGGTGATATTTTGT  500

seq1  ATTCATTTATTTATTTTTATTTCTAAATTTTAATTATATATATATGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTATTTATTTTTATTTCTAAATTTTAATTATATATATATGTATA  550

seq1  TATATTCATTGTACACAATACTCTGTTAGAAAAACATTTTCTTTTCATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCATTGTACACAATACTCTGTTAGAAAAACATTTTCTTTTCATTG  600

seq1  GTACACACCTCTGTTCAAATTCCTGACCCTCTGTCTATAATCCCTTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACACCTCTGTTCAAATTCCTGACCCTCTGTCTATAATCCCTTTCTC  650

seq1  ATAGCATACCTGATCCTGCTCCCCTTTCCTCCCTCCCTCTTTTCTCTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATACCTGATCCTGCTCCCCTTTCCTCCCTCCCTCTTTTCTCTTCC  700

seq1  TCCCAAGTCCACCCTCTATCTCCCTTGAGTATTTTGTTCCCCGTCTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGTCCACCCTCTATCTCCCTTGAGTATTTTGTTCCCCGTCTAAGA  750

seq1  AGTTACCTCTTCCTTTTTCTTGACCTGCATGTGGTGTGTAATTGTATCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCTCTTCCTTTTTCTTGACCTGCATGTGGTGTGTAATTGTATCTT  800

seq1  GGGTATTTCGAGCTTTTGGGCTAATATCCACTTAAAAGTGAATGCATGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTTCGAGCTTTTGGGCTAATATCCACTTAAAAGTGAATGCATGGC  850

seq1  ATGTGTCTTCTTTTGTGACTGGGTTACCTCACACAAGATGATATCTTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTTCTTTTGTGACTGGGTTACCTCACACAAGATGATATCTTCTA  900

seq1  GTTCCATCAATTTGCTTAAGAATTTCATGAAGTCGTTATTTTTAGTAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATCAATTTGCTTAAGAATTTCATGAAGTCGTTATTTTTAGTAGAT  950

seq1  GAGTAGTACTCCATTGTGTAAACATACCATATTTTCTGTATCCATTCCTC  1000
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAGTAGTACTCCATTGTGTAAACATACCATATTTTCTGTATCCATT-CTC  999

seq1  TGCTGAAGACATCTGGGTTCTTTTCAGCTTCTGGC-TATT-ATAAATAAG  1048
      ||||||||||||||||||||||||||||||||||| |||| |||||||||
seq2  TGCTGAAGACATCTGGGTTCTTTTCAGCTTCTGGCTTATTAATAAATAAG  1049

seq1  GC-TGCTA-TGAACATAGTAGAGCAT-GTGTCATT  1080
      || ||||| ||||||||||||||||| ||||||||
seq2  GCTTGCTATTGAACATAGTAGAGCATGGTGTCATT  1084


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