BAC Information

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BAC

Clone NameB6Ng01-326C11
Chromosome3 (Build37)
Map Location 67,597,835 - 67,750,456
singlet/doubletdoublet
Overlap geneEG208426
Upstream geneLOC625115, Shox2, Rsrc1, Mlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412
Downstream geneEG545531, LOC631379, Schip1, Il12a, LOC639530, 1110032F04Rik, Ift80
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326C11.bB6Ng01-326C11.g
ACCGA114032GA114033
length1,070937
definitionB6Ng01-326C11.b B6Ng01-326C11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,749,936 - 67,750,456)(67,597,835 - 67,598,670)
sequence
gaattctctgaatgaaggacatactaacaggtggttttactttgaatccc
cacctcttagtgtttatgttgctatgtggccatatttccttgagtatgga
agagatctgacttgcttctgccttagaaaatacaacaaaacttatagatt
atgatgtttggttggctatgatatcaaactaacaagatactctagaccct
ttccctactgacttaatgacaaaagcacccataataggaaaggcagacag
caagacagacagacaaggaactacagtggcctctgagccaaggagagtct
ctagtccaagtgtgcaagagaatgagttgaggcccttagtcctacctgaa
aaccacaatcaagttaattctgtctacaacccaaaggcactcataagcaa
attttccttcaagtgaggccaccgatgagatttcagctttgtaggtacca
tgtttacattgtttacagtctgtgagatcctctacatagggatcatttaa
gtactgccttggtttttcactcatagggaagaagtcaaaatatcactttt
tgcagatgatatgatagtatatataagtgaccctaaaaattctaccagaa
aactcctaagcctgataaacaccttcagtgaagtagctggatataaaatt
aactcaaacaagtcaatggcctttctgtacacaaaggataaacaggctga
gaaagaaattagggaacaacacccttctcaatagtcacaaataatataaa
ataccttggtgtgactctaactaaggaagtgaaagatctgtatgataaga
acttcaagtctctgaagaaagaaattaaagaagatctcagaagatggaaa
gatcccccatgctcatggatggcaggatcaatatagtaaaaatggctatc
atgccaaaagcaatctacagattcaatgcaatccccatcaaattccaact
caattcttcaaccaattagaaagggcaatcggcagattcatctggaatac
aaaaacctagaatagcaaaactcttctcaggataaaagaacctctggtga
aatcaccatgcctgacttaa
gaattcttttggggaccgatggctattcttggttgtcaactatttctgga
gttaactaaaacccaaaggctgagcacacctgtgagggacttttttaaga
ttaagtcacttggagtgggaagatatacttcattcatatatgtatatatg
aatatatatatatttatatatacatatatataaataacctggggtttcca
cattgtttttgacagaaatgtagaacaaaaaataagttatgcaggcaaaa
tttgaaacacatgctgtggaattgaagagtcttagtgatgaagacgctgt
ctgagttggtggtgatcaaaccttgaagaagatttgttttttgtttttaa
ttctttttttttaaattaggtatttatttcatttacatttccaattctat
cccaaaagtcccccatctgcttcccgacccaccccccacccacccactcc
cacttcttggccctggcattcctctgtactgaggcagataaagtttgcaa
gatcaatgggcctctctttccactgatggtcgactaggccatcttcttat
acatatgcagctggaaacacgagctctggagggtactgggtagttcatat
tgttgttccatctatagggttgcagatccttttagctccttgggtacttt
ctctagctcctccattgggggccctgtgatccatccaatagctgactgtg
agcatccacttctgcgtttgctaggccctggcatagtctcacaagagaca
gctatatctgggttctttcagcaaaatcttgctagtgtatgcaatggtgt
cagcgtttggaggctgattatgggatggatccccgggatatggcagtctc
gagatggtccatccttttgtctcagctccaaactgtgtctctgtaactcc
ttccatgggtgttttgttctcagttctaagaaggggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_67749936_67750456
seq2: B6Ng01-326C11.b_50_570 (reverse)

seq1  AGTGAAAAACCAAGGCAGTACTTAAATGATCCCTATGTAGAGGATCTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAAAACCAAGGCAGTACTTAAATGATCCCTATGTAGAGGATCTCAC  50

seq1  AGACTGTAAACAATGTAAACATGGTACCTACAAAGCTGAAATCTCATCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTAAACAATGTAAACATGGTACCTACAAAGCTGAAATCTCATCGG  100

seq1  TGGCCTCACTTGAAGGAAAATTTGCTTATGAGTGCCTTTGGGTTGTAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCACTTGAAGGAAAATTTGCTTATGAGTGCCTTTGGGTTGTAGAC  150

seq1  AGAATTAACTTGATTGTGGTTTTCAGGTAGGACTAAGGGCCTCAACTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAACTTGATTGTGGTTTTCAGGTAGGACTAAGGGCCTCAACTCAT  200

seq1  TCTCTTGCACACTTGGACTAGAGACTCTCCTTGGCTCAGAGGCCACTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGCACACTTGGACTAGAGACTCTCCTTGGCTCAGAGGCCACTGTA  250

seq1  GTTCCTTGTCTGTCTGTCTTGCTGTCTGCCTTTCCTATTATGGGTGCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTGTCTGTCTGTCTTGCTGTCTGCCTTTCCTATTATGGGTGCTTT  300

seq1  TGTCATTAAGTCAGTAGGGAAAGGGTCTAGAGTATCTTGTTAGTTTGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTAAGTCAGTAGGGAAAGGGTCTAGAGTATCTTGTTAGTTTGATA  350

seq1  TCATAGCCAACCAAACATCATAATCTATAAGTTTTGTTGTATTTTCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCCAACCAAACATCATAATCTATAAGTTTTGTTGTATTTTCTAAG  400

seq1  GCAGAAGCAAGTCAGATCTCTTCCATACTCAAGGAAATATGGCCACATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGCAAGTCAGATCTCTTCCATACTCAAGGAAATATGGCCACATAG  450

seq1  CAACATAAACACTAAGAGGTGGGGATTCAAAGTAAAACCACCTGTTAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATAAACACTAAGAGGTGGGGATTCAAAGTAAAACCACCTGTTAGTA  500

seq1  TGTCCTTCATTCAGAGAATTC  521
      |||||||||||||||||||||
seq2  TGTCCTTCATTCAGAGAATTC  521

seq1: chr3_67597835_67598670
seq2: B6Ng01-326C11.g_69_904

seq1  GAATTCTTTTGGGGACCGATGGCTATTCTTGGTTGTCAACTATTTCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGGGGACCGATGGCTATTCTTGGTTGTCAACTATTTCTGGA  50

seq1  GTTAACTAAAACCCAAAGGCTGAGCACACCTGTGAGGGACTTTTTTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTAAAACCCAAAGGCTGAGCACACCTGTGAGGGACTTTTTTAAGA  100

seq1  TTAAGTCACTTGGAGTGGGAAGATATACTTCATTCATATATGTATATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCACTTGGAGTGGGAAGATATACTTCATTCATATATGTATATATG  150

seq1  AATATATATATATTTATATATACATATATATAAATAACCTGGGGTTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATATATATTTATATATACATATATATAAATAACCTGGGGTTTCCA  200

seq1  CATTGTTTTTGACAGAAATGTAGAACAAAAAATAAGTTATGCAGGCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTTTTGACAGAAATGTAGAACAAAAAATAAGTTATGCAGGCAAAA  250

seq1  TTTGAAACACATGCTGTGGAATTGAAGAGTCTTAGTGATGAAGACGCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACACATGCTGTGGAATTGAAGAGTCTTAGTGATGAAGACGCTGT  300

seq1  CTGAGTTGGTGGTGATCAAACCTTGAAGAAGATTTGTTTTTTGTTTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTGGTGGTGATCAAACCTTGAAGAAGATTTGTTTTTTGTTTTTAA  350

seq1  TTCTTTTTTTTTAAATTAGGTATTTATTTCATTTACATTTCCAATTCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTAAATTAGGTATTTATTTCATTTACATTTCCAATTCTAT  400

seq1  CCCAAAAGTCCCCCATCTGCTTCCCGACCCACCCCCCACCCACCCACTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAGTCCCCCATCTGCTTCCCGACCCACCCCCCACCCACCCACTCC  450

seq1  CACTTCTTGGCCCTGGCATTCCTCTGTACTGAGGCAGATAAAGTTTGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTTGGCCCTGGCATTCCTCTGTACTGAGGCAGATAAAGTTTGCAA  500

seq1  GATCAATGGGCCTCTCTTTCCACTGATGGTCGACTAGGCCATCTTCTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATGGGCCTCTCTTTCCACTGATGGTCGACTAGGCCATCTTCTTAT  550

seq1  ACATATGCAGCTGGAAACACGAGCTCTGGAGGGTACTGGGTAGTTCATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGCAGCTGGAAACACGAGCTCTGGAGGGTACTGGGTAGTTCATAT  600

seq1  TGTTGTTCCATCTATAGGGTTGCAGATCCTTTTAGCTCCTTGGGTACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTCCATCTATAGGGTTGCAGATCCTTTTAGCTCCTTGGGTACTTT  650

seq1  CTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGACTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGACTGTG  700

seq1  AGCATCCACTTCTGCGTTTGCTAGGCCCTGGCATAGTCTCACAAGAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCACTTCTGCGTTTGCTAGGCCCTGGCATAGTCTCACAAGAGACA  750

seq1  GCTATATCTGGGTTCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATCTGGGTTCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGT  800

seq1  CAGCGTTTGGAGGCTGATTATGGGATGGATCCCCGG  836
      ||||||||||||||||||||||||||||||||||||
seq2  CAGCGTTTGGAGGCTGATTATGGGATGGATCCCCGG  836