BAC Information

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BAC

Clone NameB6Ng01-326D13
Chromosome3 (Build37)
Map Location 3,516,038 - 3,517,239
singlet/doubletsinglet
Overlap geneHnf4g
Upstream geneLOC667655, LOC100039140
Downstream geneEG383815, LOC100039157, LOC100039167, LOC667709
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326D13.bB6Ng01-326D13.g
ACCGA114084GA114085
length1,2001,157
definitionB6Ng01-326D13.b B6Ng01-326D13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaatatctaattcacacacacaatttccttgagaattctttt
gagaaaagttaatgggcttctcaccaggattttgtagcacttttgtacta
gtgaacacttatgtgcatcttggtgaatagtaattatcttaagtgtattc
acttcagacatgatcaacttaaaagacagcaatagcttattccacagtgt
aaaaggcagtgctttaaaataaggctctccatacatgactactgtgatta
ctgtgccccttccttcctcattatggtttcatagtcagttagtaaataca
tactcctgaagttatcccaaagcgtaggcattcctaatgacagtccctaa
catcggagacattactattcattagatcatcatccaacattcaatctcca
tgcaagatgaagttaaaaattatcagaccagagaaagaataagttgcaat
gaaaatgacatgcagggcaagagcttgaccaacatttcaagaaaggtaca
gaagacttgcaaactaagtggagactggcttggatgaaagaggcaggtaa
caacagtggtggcttattcagagtgctctaactagaaatgtcacgtctga
tggcccatatataacatagtgaatttgaggaactaaacaaattattccac
ctcaactaaactgagaggattgacctgtaatggtcaaaagtcacaatatg
aggggttcaatgatggaaggcctgtgttttcaataagcacattaggaaat
taactcatggtcacaaaatctctgctaccttagaacttgttgggctacca
aggttaagaaaatacattattgtcagttataaaaattctcataggaaata
aaaattacttagctgaaaattaatcaaaaagcagggtacagtattctttg
taaatataaaacagctttcctaaatgaccaaataaactttagttttgcag
aatagatcaaatgttaatatgaacccacgtagaaatgggatcattgaaat
atcacaacttcataatgactgtgatcaaagggaagacttcactgtacctg
agcaggcccatacccatttggcaaatattattgttgcagaaatagtacca
cagcacagaggaaagtagaaagactaggtgcctagacagccaacgatcag
tacatgaccacctacaatatgccttagagagatgtggtctgccagcttca


gaattctttcattgtgttccatagtttgggtatgttgtggcttcattttc
attaaactctaaaatgtctttaaactctttctttatctattccttgacta
aggcataattaagtgttcttcagcttccatatgaatgttggctttctatt
atttatgttgttattaaagattagctttagtccatggtaatctaatagga
ttcatgggataatttcagtaattttgtatctgttgaagcctgttttgtga
ctaattatatggtcgattttggagaagatgtcatgaggtgctgagaagaa
ggtatttccttttgttttaggataaaatgttctgtagatatcttttcaat
ccattttctttcataacttctgttagtttcaatgtgtctgcactatgttt
ctgtttctaggatctttccattgataaacgtggggtgttgaagtctccca
ctattattgtgtgaggtgcaatttgtgcttggaactttactatagtttct
ttaatggatgtggctgtccttgcatttggagcatagatattcagaattga
gagtttatcttggaatattttacgtttgatgagtatgaagtgcccctcct
tgtcttttttgataactttggattggaaatcaattttatttgatattaga
atggctaccccagcttgtttctttggaccatttgcttggaaaatcgtttt
ccagccctttactctgaggcagtgtctgtctttttctctgaggtgggttt
cctgtaagcagcaaaaaattgggtcttttttatgcagtcagtctattagt
ctatgtctttttatttgggagttgagtactttgatattaagagatattaa
ggaaaagtaacttttgctttctgttacttttgttattagagttggtattc
tgttcccatggcctgtcttcttttggggttgttgaaagattactttcttg
cttttttctagagccgtagtttctgtctttgtgttggtgtttccctatat
tatcctctgaattttcccattattattctggattccatggaagatattgt
gtgaatgtgcctttgtcatgggatactttgccttctccctctatgggtaa
tgagagcttgctggttaatatcctggattggccttgtgtgtttcacttag
gtgtgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_3516038_3517239
seq2: B6Ng01-326D13.b_46_1245 (reverse)

seq1  TGAAGCTGCCAGAACCACATC-CTCTAA-GCATA-TGTA-GTGGTCATGT  46
      |||||||| ||| |||||||| |||||| ||||| |||| ||||||||||
seq2  TGAAGCTGGCAG-ACCACATCTCTCTAAGGCATATTGTAGGTGGTCATGT  49

seq1  ACTGAATTCTGTTTGCTGTCTAGGCACCTAGTCTTTCTACTTTTCTTCTG  96
      |||||  || ||| |||||||||||||||||||||||||| |||| ||||
seq2  ACTGA--TC-GTTGGCTGTCTAGGCACCTAGTCTTTCTAC-TTTCCTCTG  95

seq1  TGCTGTTGGTACTATTTCTGCAAC-ATAATATTTGCCAAATGGGTATGGG  145
      ||||| |||||||||||||||||| |||||||||||||||||||||||||
seq2  TGCTG-TGGTACTATTTCTGCAACAATAATATTTGCCAAATGGGTATGGG  144

seq1  CCTGCCTCAGGTACAGTGAAGTCTTCCCTTTGATCACAGTCATTATGAAG  195
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTG-CTCAGGTACAGTGAAGTCTTCCCTTTGATCACAGTCATTATGAAG  193

seq1  TTGTGATATTTCAATGATCCCATTTCTACGTGGGTTCATATTAACATTTG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATATTTCAATGATCCCATTTCTACGTGGGTTCATATTAACATTTG  243

seq1  ATCTATTCTGCAAAACTAAAGTTTATTTGGTCATTTAGGAAAGCTGTTTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTCTGCAAAACTAAAGTTTATTTGGTCATTTAGGAAAGCTGTTTT  293

seq1  ATATTTACAAAGAATACTGTACCCTGCTTTTTGATTAATTTTCAGCTAAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACAAAGAATACTGTACCCTGCTTTTTGATTAATTTTCAGCTAAG  343

seq1  TAATTTTTATTTCCTATGAGAATTTTTATAACTGACAATAATGTATTTTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTATTTCCTATGAGAATTTTTATAACTGACAATAATGTATTTTC  393

seq1  TTAACCTTGGTAGCCCAACAAGTTCTAAGGTAGCAGAGATTTTGTGACCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTTGGTAGCCCAACAAGTTCTAAGGTAGCAGAGATTTTGTGACCA  443

seq1  TGAGTTAATTTCCTAATGTGCTTATTGAAAACACAGGCCTTCCATCATTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTAATTTCCTAATGTGCTTATTGAAAACACAGGCCTTCCATCATTG  493

seq1  AACCCCTCATATTGTGACTTTTGACCATTACAGGTCAATCCTCTCAGTTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTCATATTGTGACTTTTGACCATTACAGGTCAATCCTCTCAGTTT  543

seq1  AGTTGAGGTGGAATAATTTGTTTAGTTCCTCAAATTCACTATGTTATATA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAGGTGGAATAATTTGTTTAGTTCCTCAAATTCACTATGTTATATA  593

seq1  TGGGCCATCAGACGTGACATTTCTAGTTAGAGCACTCTGAATAAGCCACC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCATCAGACGTGACATTTCTAGTTAGAGCACTCTGAATAAGCCACC  643

seq1  ACTGTTGTTACCTGCCTCTTTCATCCAAGCCAGTCTCCACTTAGTTTGCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGTTACCTGCCTCTTTCATCCAAGCCAGTCTCCACTTAGTTTGCA  693

seq1  AGTCTTCTGTACCTTTCTTGAAATGTTGGTCAAGCTCTTGCCCTGCATGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCTGTACCTTTCTTGAAATGTTGGTCAAGCTCTTGCCCTGCATGT  743

seq1  CATTTTCATTGCAACTTATTCTTTCTCTGGTCTGATAATTTTTAACTTCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCATTGCAACTTATTCTTTCTCTGGTCTGATAATTTTTAACTTCA  793

seq1  TCTTGCATGGAGATTGAATGTTGGATGATGATCTAATGAATAGTAATGTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCATGGAGATTGAATGTTGGATGATGATCTAATGAATAGTAATGTC  843

seq1  TCCGATGTTAGGGACTGTCATTAGGAATGCCTACGCTTTGGGATAACTTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGATGTTAGGGACTGTCATTAGGAATGCCTACGCTTTGGGATAACTTC  893

seq1  AGGAGTATGTATTTACTAACTGACTATGAAACCATAATGAGGAAGGAAGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTATGTATTTACTAACTGACTATGAAACCATAATGAGGAAGGAAGG  943

seq1  GGCACAGTAATCACAGTAGTCATGTATGGAGAGCCTTATTTTAAAGCACT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGTAATCACAGTAGTCATGTATGGAGAGCCTTATTTTAAAGCACT  993

seq1  GCCTTTTACACTGTGGAATAAGCTATTGCTGTCTTTTAAGTTGATCATGT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTACACTGTGGAATAAGCTATTGCTGTCTTTTAAGTTGATCATGT  1043

seq1  CTGAAGTGAATACACTTAAGATAATTACTATTCACCAAGATGCACATAAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTGAATACACTTAAGATAATTACTATTCACCAAGATGCACATAAG  1093

seq1  TGTTCACTAGTACAAAAGTGCTACAAAATCCTGGTGAGAAGCCCATTAAC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACTAGTACAAAAGTGCTACAAAATCCTGGTGAGAAGCCCATTAAC  1143

seq1  TTTTCTCAAAAGAATTCTCAAGGAAATTGTGTGTGTGAATTAGATATTGT  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAAAAGAATTCTCAAGGAAATTGTGTGTGTGAATTAGATATTGT  1193

seq1  TGAATTC  1202
      |||||||
seq2  TGAATTC  1200


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