BAC Information

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BAC

Clone NameB6Ng01-326E02
Chromosome3 (Build37)
Map Location 17,158,989 - 17,160,077
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040034, LOC100040059, EG383936
Downstream geneLOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326E02.bB6Ng01-326E02.g
ACCGA114110GA114111
length1,1601,111
definitionB6Ng01-326E02.b B6Ng01-326E02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaaggcagactccagagaaacaaataaccctattaaaaagtg
gagtatagagctaaattgagggttctcaactgaggattcttgaatggctg
agaagcacctaaagaaatgttcaacattcttagtcatcagggaaactcaa
atcaaaatgaccctgagattccatctcacatcagttagaatggctattat
caaaaacagaggctaaagcagctgttggtgaggatgtggagaaagagcaa
ctctcactcctccattgctggtgggactgccagctagtaaaaccactttg
gaaattagtatgactgattctaagaaaattggaaatagttctatctgaag
acccagctatacaattccttggcatatacccaaaagttctctcacatata
acaaggacacatgctccactatgttcatcacagcattatttataatagcc
agaagctggaaacaacccagatgtcactcaaaagaagaatggatacagaa
aatgtggtacatttacacaatggagtactactcagtgcttaaaaacaatg
acttcatgaaattcacaggcaaatgaatggaattagaaaataccctaagt
gagttaactcagacacaaaagaactcacatggtatgtactcaggaataag
tggatactaacccaaaagctaaccatgcctatgatacaacctacagtcca
tatggagaatagaaggaaggatgacaagggggtggatgctccagttttgc
gttgaggtagtgtgatggtttatatatccttggaccagggagtggcacca
tctgaaggtgtggccttgttggaataggtgtgacctggttggaatgggtg
tgtcactgtgggtgtgggtataatatcctcaccctagatgcctggatgtc
agtcttccactggcagcctttgggtgaagacatagaactctcagctcctg
ctgcgccatgcctgcctggatactgccatgccttgatgataatggactaa
tctctgaacctgtaagccagcccataaatgtggttttttgtttttgtttt
gttttttaatagacttgccctggtcatggggtctgtcacgcgataaaacc
cgtaacttagaacagtagtaagatggatcgtgtagatggtaaggacaggg
ggtatatggg
gaattctaatctgtctaattagcaggaggaaaaaagtatgcttcttctcc
aagtaatatctttaatgaactgtgggggaggggggaaccctgtgtaacaa
atacatcagggttgaattttgttgatgatgtgtagtgagacacaaacccc
aaggatcactcaaataaaacagatactgtatttgggagtctttattaaga
tggtcagcaactgcctagaaagaaacaattcttacagatcatccccaact
gctttttgttcagggaccacgtaaaggcaaaaagaaaaccatatcatgct
tggcaattaccaatggaagtagagcaatagacactgttaacagtagcaaa
gagagagagagttagctgggcacttttactttgagtccctggaacaggat
tggataattctcagagtgactttcaagaggtgggagtgtaagcggaggca
gagtagcaaagagtcagactttcagtagatggctacatcagggacaagat
tgagaaaacttgagaccctcattgttattagttttctttcagaaaatgta
agaagacactatttggttaccatgaattacgataagacagttgcttctgg
tcaaaaaataaagaaacctgaaatgtaaatgaacaaacaaacgatgactg
ttgtagaaaaaaggaaagcaggatttcccacatatatactcaaggctgcc
tgcttattcacatgattggaatgaattcatcagtttctttaaattcacca
gccaatttaatctagcacctgctttggctacttttttcaactctcaaatt
tgaatgtgagcatccaagtatagttcctaatgttatgcagaaagggctga
agcttgttcagcctctttctacacagtctgtttctctttctcctttgcac
tccccagttgactcagtaagttagcttcttgcaaatacgtgaactccatg
ctattaaggcagcatagacgccttgagagtaatgaaaatatttacacgat
tgtgattcaaattgtaactgctccagcttgtccaagcttaggacagtaca
gtgccattatgaatttaatggcagcatccagaaggcacttcttaggcagc
ctctcactgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_17158989_17160077
seq2: B6Ng01-326E02.g_96_1180 (reverse)

seq1  TCCAGTGAGAGCCTCCCTAGGAAAGTGCTTTCTTGATGCTGGCCATTAAA  50
      ||||||||||| || |||| | |||||| |||| |||||| |||||| ||
seq2  TCCAGTGAGAGGCTGCCTAAG-AAGTGCCTTCTGGATGCT-GCCATT-AA  47

seq1  ATCCATAAT-GCACTGTTACTGTCCTTAGGCTTTGACAAGGTGGAACAGT  99
      || |||||| |||||| |||||||| || |||| |||||| |||| ||||
seq2  ATTCATAATGGCACTG-TACTGTCC-TAAGCTTGGACAAGCTGGAGCAGT  95

seq1  TACAATTTGAA-CACAATTGTGTAAATA-TTTCATTACTCTCAAGGCGTC  147
      ||||||||||| |||||| ||||||||| |||||||||||||||||||||
seq2  TACAATTTGAATCACAATCGTGTAAATATTTTCATTACTCTCAAGGCGTC  145

seq1  TATGCTGCCTTAATAGCATGGAGTTCACGTATTTGCAAAGAAGCTAACTT  197
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TATGCTGCCTTAATAGCATGGAGTTCACGTATTTGC-AAGAAGCTAACTT  194

seq1  AACTGAGTCAACTGGGGAGTGCAAAGGAGAAAGAGAAACAGACTGTGTAG  247
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ACTGAGTCAACTGGGGAGTGCAAAGGAGAAAGAGAAACAGACTGTGTAG  243

seq1  AAAGAGGCTGAACAAGCTTCAGCCCTTTCTGCATAACATTAGGAACTATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGCTGAACAAGCTTCAGCCCTTTCTGCATAACATTAGGAACTATA  293

seq1  CTTGGATGCTCACATTCAAATTTGAGAGTTGAAAAAAGTAGCCAAAGCAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATGCTCACATTCAAATTTGAGAGTTGAAAAAAGTAGCCAAAGCAG  343

seq1  GTGCTAGATTAAATTGGCTGGTGAATTTAAAGAAACTGATGAATTCATTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGATTAAATTGGCTGGTGAATTTAAAGAAACTGATGAATTCATTC  393

seq1  CAATCATGTGAATAAGCAGGCAGCCTTGAGTATATATGTGGGAAATCCTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATGTGAATAAGCAGGCAGCCTTGAGTATATATGTGGGAAATCCTG  443

seq1  CTTTCCTTTTTTCTACAACAGTCATCGTTTGTTTGTTCATTTACATTTCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTTTTCTACAACAGTCATCGTTTGTTTGTTCATTTACATTTCA  493

seq1  GGTTTCTTTATTTTTTGACCAGAAGCAACTGTCTTATCGTAATTCATGGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTTTATTTTTTGACCAGAAGCAACTGTCTTATCGTAATTCATGGT  543

seq1  AACCAAATAGTGTCTTCTTACATTTTCTGAAAGAAAACTAATAACAATGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATAGTGTCTTCTTACATTTTCTGAAAGAAAACTAATAACAATGA  593

seq1  GGGTCTCAAGTTTTCTCAATCTTGTCCCTGATGTAGCCATCTACTGAAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCAAGTTTTCTCAATCTTGTCCCTGATGTAGCCATCTACTGAAAG  643

seq1  TCTGACTCTTTGCTACTCTGCCTCCGCTTACACTCCCACCTCTTGAAAGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTCTTTGCTACTCTGCCTCCGCTTACACTCCCACCTCTTGAAAGT  693

seq1  CACTCTGAGAATTATCCAATCCTGTTCCAGGGACTCAAAGTAAAAGTGCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGAGAATTATCCAATCCTGTTCCAGGGACTCAAAGTAAAAGTGCC  743

seq1  CAGCTAACTCTCTCTCTCTTTGCTACTGTTAACAGTGTCTATTGCTCTAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAACTCTCTCTCTCTTTGCTACTGTTAACAGTGTCTATTGCTCTAC  793

seq1  TTCCATTGGTAATTGCCAAGCATGATATGGTTTTCTTTTTGCCTTTACGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTGGTAATTGCCAAGCATGATATGGTTTTCTTTTTGCCTTTACGT  843

seq1  GGTCCCTGAACAAAAAGCAGTTGGGGATGATCTGTAAGAATTGTTTCTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTGAACAAAAAGCAGTTGGGGATGATCTGTAAGAATTGTTTCTTT  893

seq1  CTAGGCAGTTGCTGACCATCTTAATAAAGACTCCCAAATACAGTATCTGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAGTTGCTGACCATCTTAATAAAGACTCCCAAATACAGTATCTGT  943

seq1  TTTATTTGAGTGATCCTTGGGGTCTTTGTCTCACAACACATCAAAAACAA  997
      ||||||||||||||||||||||| | |||||||| ||||||||  |||||
seq2  TTTATTTGAGTGATCCTTGGGGTTTGTGTCTCACTACACATCATCAACAA  993

seq1  AATTCAACCCTAATGTCTTTGTTACACAATGTTGAACAATTGGATAAAGT  1047
      ||||||||||| |||| |||||||||||  |||   |  |     | |||
seq2  AATTCAACCCTGATGTATTTGTTACACAGGGTTCCCCCCTCCCCCACAGT  1043

seq1  TCATTAAAGATACTACTTGGAGAAGAAGCATACTTTTTTCCT  1089
      |||||||||||| |||||||||||||||||||||||||||||
seq2  TCATTAAAGATATTACTTGGAGAAGAAGCATACTTTTTTCCT  1085