BAC Information

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BAC

Clone NameB6Ng01-326H05
Chromosome3 (Build37)
Map Location 127,448,554 - 127,487,793
singlet/doubletdoublet
Overlap geneAlpk1
Upstream geneCamk2d, Ank2, LOC100043749, LOC100043361, LOC100043364, Larp7, 4930422G04Rik, Neurog2
Downstream geneT2bp, BC002199, 5730508B09Rik, LOC100043382, EG668828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326H05.bB6Ng01-326H05.g
ACCGA114257GA114258
length488595
definitionB6Ng01-326H05.b B6Ng01-326H05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,487,300 - 127,487,793)(127,448,554 - 127,449,148)
sequence
ttaaaaggtgtcagatatgagcttctgccagccagggtgctctcctgtcc
ttgtctgttttcctctctatcatcctctactgacccctcctattcattgc
cactgtgacccaaactatccccactcctacctgccccaccttcaggcagg
cctagggtcagggcatgaccttaactgaatccttgtcaccttgttgaagt
ctttaaccaatctgcctttgaagaggaactaaatataatgtggctggttt
tgttttatttgaggtacatgattttgttgttgctgttgtctttcttctgc
cattttgggcattctttccccaaatcctttgtagattagattcctccttt
tcttcataaattctgttttaggttgagttcagtagtaatggcttgttaga
catgtgccaagtgctggatttgattcccagcacgaagaggtgaaggaaaa
ggacaagggagaagaggaggggaggagggagaggagga
gaattctctctagacctctacttcgataattcaacccagaacagctctcc
tgtcagagtctctcagagggcgggggcaccctgtctcctaacagataatt
accgatgagttactgcctcttgctaggatttctctccttcgcttgcgcct
cttataaaagaagaaactttagagattaaggttttcttttcctccttctt
cttattctttttttttcccccctccaaagctgggtacaccaactggcatg
ggctgtattaaaaccagggggaagctcagtcaaaaagcctttcggaaggc
agacgttcttcttaatatgcaccaacatgaaaggctttcttttcatccta
tacaactacagtgtgtgtaaattgcagggggctcactggcgtaaatctcg
gctgcgacctctgaggtaaactggatttacattactttctgacaagaatt
aaatgaaggccttgtggatatatgaacagccttctcggctgcaacagatg
ggcatgaatgtgctccctaggaaaactatcagtaacatctgtgccctccg
aattctggtggtctcagccaattaacagggggtggggggaggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_127487300_127487793
seq2: B6Ng01-326H05.b_51_544 (reverse)

seq1  TCCTCCTCTCCCTCCTCCCCTCCTCTTCTCCCTTGTCCTTTTCCTTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCTCCCTCCTCCCCTCCTCTTCTCCCTTGTCCTTTTCCTTCACC  50

seq1  TCTTCGTGCTGGGAATCAAATCCAGCACTTGGCACATGTCTAACAAGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCGTGCTGGGAATCAAATCCAGCACTTGGCACATGTCTAACAAGCCA  100

seq1  TTACTACTGAACTCAACCTAAAACAGAATTTATGAAGAAAAGGAGGAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTACTGAACTCAACCTAAAACAGAATTTATGAAGAAAAGGAGGAATC  150

seq1  TAATCTACAAAGGATTTGGGGAAAGAATGCCCAAAATGGCAGAAGAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTACAAAGGATTTGGGGAAAGAATGCCCAAAATGGCAGAAGAAAGA  200

seq1  CAACAGCAACAACAAAATCATGTACCTCAAATAAAACAAAACCAGCCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCAACAACAAAATCATGTACCTCAAATAAAACAAAACCAGCCACA  250

seq1  TTATATTTAGTTCCTCTTCAAAGGCAGATTGGTTAAAGACTTCAACAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTAGTTCCTCTTCAAAGGCAGATTGGTTAAAGACTTCAACAAGG  300

seq1  TGACAAGGATTCAGTTAAGGTCATGCCCTGACCCTAGGCCTGCCTGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGGATTCAGTTAAGGTCATGCCCTGACCCTAGGCCTGCCTGAAGG  350

seq1  TGGGGCAGGTAGGAGTGGGGATAGTTTGGGTCACAGTGGCAATGAATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCAGGTAGGAGTGGGGATAGTTTGGGTCACAGTGGCAATGAATAGG  400

seq1  AGGGGTCAGTAGAGGATGATAGAGAGGAAAACAGACAAGGACAGGAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTCAGTAGAGGATGATAGAGAGGAAAACAGACAAGGACAGGAGAGC  450

seq1  ACCCTGGCTGGCAGAAGCTCATATCTGACACCTTTTAAGAATTC  494
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGCTGGCAGAAGCTCATATCTGACACCTTTTAAGAATTC  494

seq1: chr3_127448554_127449148
seq2: B6Ng01-326H05.g_63_657

seq1  GAATTCTCTCTAGACCTCTACTTCGATAATTCAACCCAGAACAGCTCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTAGACCTCTACTTCGATAATTCAACCCAGAACAGCTCTCC  50

seq1  TGTCAGAGTCTCTCAGAGGGCGGGGGCACCCTGTCTCCTAACAGATAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAGTCTCTCAGAGGGCGGGGGCACCCTGTCTCCTAACAGATAATT  100

seq1  ACCGATGAGTTACTGCCTCTTGCTAGGATTTCTCTCCTTCGCTTGCGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGATGAGTTACTGCCTCTTGCTAGGATTTCTCTCCTTCGCTTGCGCCT  150

seq1  CTTATAAAAGAAGAAACTTTAGAGATTAAGGTTTTCTTTTCCTCCTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAAAGAAGAAACTTTAGAGATTAAGGTTTTCTTTTCCTCCTTCTT  200

seq1  CTTATTCTTTTTTTTTCCCCCCTCCAAAGCTGGGTACACCAACTGGCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCTTTTTTTTTCCCCCCTCCAAAGCTGGGTACACCAACTGGCATG  250

seq1  GGCTGTATTAAAACCAGGGGGAAGCTCAGTCAAAAAGCCTTTCGGAAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTATTAAAACCAGGGGGAAGCTCAGTCAAAAAGCCTTTCGGAAGGC  300

seq1  AGACGTTCTTCTTAATATGCACCAACATGAAAGGCTTTCTTTTCATCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTTCTTCTTAATATGCACCAACATGAAAGGCTTTCTTTTCATCCTA  350

seq1  TACAACTACAGTGTGTGTAAATTGCAGGGGGCTCACTGGCGTAAATCTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTACAGTGTGTGTAAATTGCAGGGGGCTCACTGGCGTAAATCTCG  400

seq1  GCTGCGACCTCTGAGGTAAACTGGATTTACATTACTTTCTGACAAGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCGACCTCTGAGGTAAACTGGATTTACATTACTTTCTGACAAGAATT  450

seq1  AAATGAAGGCCTTGTGGATATATGAACAGCCTTCTCGGCTGCAACAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGGCCTTGTGGATATATGAACAGCCTTCTCGGCTGCAACAGATG  500

seq1  GGCATGAATGTGCTCCCTAGGAAAACTATCAGTAACATCTGTGCCCTCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGAATGTGCTCCCTAGGAAAACTATCAGTAACATCTGTGCCCTCCG  550

seq1  AATTCTGGTGGTCTCAGCCAATTAACAGGGGGTGGGGGGAGGTGG  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGTGGTCTCAGCCAATTAACAGGGGGTGGGGGGAGGTGG  595