BAC Information

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BAC

Clone NameB6Ng01-328J03
Chromosome3 (Build37)
Map Location 139,317,701 - 139,318,575
singlet/doubletsinglet
Overlap geneB930007M17Rik
Upstream geneTspan5, LOC620771, Rap1gds1, EG229879, LOC100039840
Downstream geneLOC229883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328J03.bB6Ng01-328J03.g
ACCGA115797GA115798
length8801,213
definitionB6Ng01-328J03.b B6Ng01-328J03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatttatacaaagaaatgaaggaaacatttcaattagcattgc
tttagccagaacaaacctgttgtgaacgaagcaggtatccctaaagctgt
caaacccatggaagagtcaacacaatatagcaactgaagacaatagtttg
gaatcttctactgtgattaaatatctgcatacacactagcattccaattt
cactttctcaaattcatccaaatgtcatgttcacagacaaaaacctttat
ataaatataagtatctttatgcataatccttcaaacttaaaaaaaaaaaa
aacctcaaatagtcttcaatcgtgaagtgggtgtataaattttggtattt
ataaaatagaaaatttcaaagattattaaatcttaaaatatgtaacaaag
cagaaggatttctggtatgccatgattaaaggattccacacttgaaaaat
ttagtaacttattatttttatttataaaatattttagcaaggaaaaaaac
atcacagatagcatatttgtggttttagggatggtaattgtagagaaagg
tcttctttataaatttgggagttttctggaaagacacaaagcagagcagt
gcaggaatgaggaattggggaagaaggtgaggaatgagggagtaagcagg
gaaagttaatcaaaatgaagagttatcaaaagccctggctacacaattta
aaaaaacaaaaaggttagaacgatagatgtcattctagagtaaataatac
ccatttccaagatgtaatgtaaatctaaacctcaaaatgtggggatatcc
cttttctgtaggagtggtaaggaatacacaggaagctctgaaaacagttg
agattcctcttgctcttccaccagaactga

gaattctcacctgaggaataccgaatggtagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaacatccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggcgtggatgtggagaaagaggaacactcctccattgttggtgg
gagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaactggacatagtactaccggaggatccagcaatacctctcctgggca
tatatccagaagatgccccaacaggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacctagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
aaactcacacaatatgtattcactgataagtggatattagccccaaacct
aggatacccaagatataagatataatttgctaaacacatgaaactcaaga
agaatgaagactgatgtgtggacactatgcccctccttagatttgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttattgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatcgatggatcatagggctcccaa
tggaggagctagaagaaagtagccaagagctaaagggatctgcaccctat
aggtggaacacatatgactaccagtaccccgagctcttgactctagctgc
ataattatcaaagatgacctagtcggccatcactgaaagagaggtccaat
ggacttgcaaacttatatgcccagtacagggaacactcaggtctaaggga
attggctgcccaggggagtggtgcttatgcgatgatcgatgtgatcgtct
gtgcagctactgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_139317701_139318575
seq2: B6Ng01-328J03.b_46_925 (reverse)

seq1  TCAGTTCTGGTGGGAAGAGCAAGAGGAATCACAATTGATTTCAGAGC-TC  49
      ||||||||||| |||||||||||||||||| ||| || ||||||||| ||
seq2  TCAGTTCTGGT-GGAAGAGCAAGAGGAATCTCAACTGTTTTCAGAGCTTC  49

seq1  CTGTGGTATTCCTTACCAACTCCTACAGAAA--GGATAT-CCCATATTTT  96
      |||| |||||||||||| |||||||||||||  |||||| |||| |||||
seq2  CTGT-GTATTCCTTACC-ACTCCTACAGAAAAGGGATATCCCCACATTTT  97

seq1  GAGTTTTTG-TTTACATTACATCTTGGAA--TGGTATTATTTACTCTAGA  143
      ||| ||| | |||||||||||||||||||   ||||||||||||||||||
seq2  GAGGTTTAGATTTACATTACATCTTGGAAATGGGTATTATTTACTCTAGA  147

seq1  ATGACATCTATCG-TCAAACCTTTTTGTTTTTTTAAATTGTGTAGCCAGG  192
      ||||||||||||| || |||||||||||||||||||||||||||||||||
seq2  ATGACATCTATCGTTCTAACCTTTTTGTTTTTTTAAATTGTGTAGCCAGG  197

seq1  GCTTTTGATAACTCTTCATTTTGATTAACTTTCCCTGCTTACTCCCTCAT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGATAACTCTTCATTTTGATTAACTTTCCCTGCTTACTCCCTCAT  247

seq1  TCCTCACCTTCTTCCCCAATTCCTCATTCCTGCACTGCTCTGCTTTGTGT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACCTTCTTCCCCAATTCCTCATTCCTGCACTGCTCTGCTTTGTGT  297

seq1  CTTTCCAGAAAACTCCCAAATTTATAAAGAAGACCTTTCTCTACAATTAC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGAAAACTCCCAAATTTATAAAGAAGACCTTTCTCTACAATTAC  347

seq1  CATCCCTAAAACCACAAATATGCTATCTGTGATGTTTTTTTCCTTGCTAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTAAAACCACAAATATGCTATCTGTGATGTTTTTTTCCTTGCTAA  397

seq1  AATATTTTATAAATAAAAATAATAAGTTACTAAATTTTTCAAGTGTGGAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTATAAATAAAAATAATAAGTTACTAAATTTTTCAAGTGTGGAA  447

seq1  TCCTTTAATCATGGCATACCAGAAATCCTTCTGCTTTGTTACATATTTTA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAATCATGGCATACCAGAAATCCTTCTGCTTTGTTACATATTTTA  497

seq1  AGATTTAATAATCTTTGAAATTTTCTATTTTATAAATACCAAAATTTATA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAATAATCTTTGAAATTTTCTATTTTATAAATACCAAAATTTATA  547

seq1  CACCCACTTCACGATTGAAGACTATTTGAGGTTTTTTTTTTTTTTAAGTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACTTCACGATTGAAGACTATTTGAGGTTTTTTTTTTTTTTAAGTT  597

seq1  TGAAGGATTATGCATAAAGATACTTATATTTATATAAAGGTTTTTGTCTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGATTATGCATAAAGATACTTATATTTATATAAAGGTTTTTGTCTG  647

seq1  TGAACATGACATTTGGATGAATTTGAGAAAGTGAAATTGGAATGCTAGTG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATGACATTTGGATGAATTTGAGAAAGTGAAATTGGAATGCTAGTG  697

seq1  TGTATGCAGATATTTAATCACAGTAGAAGATTCCAAACTATTGTCTTCAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCAGATATTTAATCACAGTAGAAGATTCCAAACTATTGTCTTCAG  747

seq1  TTGCTATATTGTGTTGACTCTTCCATGGGTTTGACAGCTTTAGGGATACC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATATTGTGTTGACTCTTCCATGGGTTTGACAGCTTTAGGGATACC  797

seq1  TGCTTCGTTCACAACAGGTTTGTTCTGGCTAAAGCAATGCTAATTGAAAT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCGTTCACAACAGGTTTGTTCTGGCTAAAGCAATGCTAATTGAAAT  847

seq1  GTTTCCTTCATTTCTTTGTATAAATGAGAATTC  875
      |||||||||||||||||||||||||||||||||
seq2  GTTTCCTTCATTTCTTTGTATAAATGAGAATTC  880


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