BAC Information

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BAC

Clone NameB6Ng01-330D24
Chromosome3 (Build37)
Map Location 73,302,596 - 73,303,780
singlet/doubletsinglet
Overlap genenone
Upstream gene2010204N08Rik, Slitrk3
Downstream geneBche, LOC667425, LOC619764, LOC667434
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330D24.bB6Ng01-330D24.g
ACCGA116984GA116985
length1,1751,188
definitionB6Ng01-330D24.b B6Ng01-330D24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatgcaatgtgacaagctgtactcctgctcctgctcctgctct
cagactaagtttgtcataatgggatgatccccctcaaaaggtaaaataga
ataaggctgtcctcccttttattccagttctaggactgtaatcaggacaa
tgaaccattttctgccttcatgagggaaatttgagaatataactctaggt
atctgtgccaatattaagtggaaacacttgaacccattctctacatatta
attatgaagtatttgtttttgtattcaagtgcataccattcaactaatta
gagtattttattttaaaacataacaaaattttaggagttatttctgttta
ctgtcttcacagatgtagttttatattggaaaattttaatggtcttttga
gaacgtaaccattactacgcaaaacgtttatatttgagctgttatcttaa
ggtatgttttctccccaattactcatgaaatgcaataatctcaatcacta
atgcaattacacttgctctgcccattctcaacatccacatgagttagatt
catcctccaaagtagcttcttatctatcttaccactcttctgctttctta
ggcacatcctctgattacatccttctagaatatcatcactcactattaaa
gtattaatcagcagtcctaatatacagaatagaaagcttcacattgtttc
atagatattgtttctacattgtgtgtgttatacttcacataatctttctg
tcaaattctgcttggccatgtttaagggacaccatgacatggcttctgcc
cttgggagagagacagcaatacatgggctttcccaagtgttgatggttgc
tgtgggcatagagcttgtatgcataatgtacatattttccttattgagga
atgttctctctgccaaggttattgcctccatgataatcagagacagcaga
gtcctggaaagtgacagtgtgtctatgtctcagaaaaaaaaaaaaaaaaa
agggtagatgcagtgaccttcaaaacagccatatggtttgtgggaaagaa
tactgaaaatatgagttcaaaaaatatatattctacctatggccaacgca
agaatgcatatggatggtataggagcttcagatctagacctggccagcta
cagttgaactagactttgtcgaaag

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaactcagttgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatattcaaaagatgccccaactggtaagtaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcatg
aagaatgaagactgaagtgtggacactatgcccctccttagattcggcaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggaccatagggctccca
atggaggagctagagaaagtagccaaggagctaaagggatctgcacccct
ataggtggaacaacattatgaactaaccagtatcccggagctctgactct
agctgcatattttatcaaaagatggcctagtcggccatcacctgaagaag
agggctccattggaactggccaaactattatattgccctcagttacaggg
gatactcatggtccaaaagggggaattttgcgttgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_73302596_73303780
seq2: B6Ng01-330D24.b_46_1220

seq1  GAATTCAGATGCAATGTGACAAGCTGTACTCCTGCTCCTGCTCCTGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATGCAATGTGACAAGCTGTACTCCTGCTCCTGCTCCTGCTCT  50

seq1  CAGACTAAGTTTGTCATAATGGGATGATCCCCCTCAAAAGGTAAAATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTAAGTTTGTCATAATGGGATGATCCCCCTCAAAAGGTAAAATAGA  100

seq1  ATAAGGCTGTCCTCCCTTTTATTCCAGTTCTAGGACTGTAATCAGGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCTGTCCTCCCTTTTATTCCAGTTCTAGGACTGTAATCAGGACAA  150

seq1  TGAACCATTTTCTGCCTTCATGAGGGAAATTTGAGAATATAACTCTAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCATTTTCTGCCTTCATGAGGGAAATTTGAGAATATAACTCTAGGT  200

seq1  ATCTGTGCCAATATTAAGTGGAAACACTTGAACCCATTCTCTACATATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGCCAATATTAAGTGGAAACACTTGAACCCATTCTCTACATATTA  250

seq1  ATTATGAAGTATTTGTTTTTGTATTCAAGTGCATACCATTCAACTAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGAAGTATTTGTTTTTGTATTCAAGTGCATACCATTCAACTAATTA  300

seq1  GAGTATTTTATTTTAAAACATAACAAAATTTTAGGAGTTATTTCTGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTTTATTTTAAAACATAACAAAATTTTAGGAGTTATTTCTGTTTA  350

seq1  CTGTCTTCACAGATGTAGTTTTATATTGGAAAATTTTAATGGTCTTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCACAGATGTAGTTTTATATTGGAAAATTTTAATGGTCTTTTGA  400

seq1  GAACGTAACCATTACTACGCAAAACGTTTATATTTGAGCTGTTATCTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGTAACCATTACTACGCAAAACGTTTATATTTGAGCTGTTATCTTAA  450

seq1  GGTATGTTTTCTCCCCAATTACTCATGAAATGCAATAATCTCAATCACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTTTTCTCCCCAATTACTCATGAAATGCAATAATCTCAATCACTA  500

seq1  ATGCAATTACACTTGCTCTGCCCATTCTCAACATCCACATGAGTTAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATTACACTTGCTCTGCCCATTCTCAACATCCACATGAGTTAGATT  550

seq1  CATCCTCCAAAGTAGCTTCTTATCTATCTTACCACTCTTCTGCTTTCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCCAAAGTAGCTTCTTATCTATCTTACCACTCTTCTGCTTTCTTA  600

seq1  GGCACATCCTCTGATTACATCCTTCTAGAATATCATCACTCACTATTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATCCTCTGATTACATCCTTCTAGAATATCATCACTCACTATTAAA  650

seq1  GTATTAATCAGCAGTCCTAATATACAGAATAGAAAGCTTCACATTGTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAATCAGCAGTCCTAATATACAGAATAGAAAGCTTCACATTGTTTC  700

seq1  ATAGATATTGTTTCTACATTGTGTGTGTTATACTTCACATAATCTTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATATTGTTTCTACATTGTGTGTGTTATACTTCACATAATCTTTCTG  750

seq1  TCAAATTCTGCTTGGCCATGTTTAAGGGACACCATGACATGGCTTCTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTCTGCTTGGCCATGTTTAAGGGACACCATGACATGGCTTCTGCC  800

seq1  CTTGGGAGAGAGACAGCAATACATGGGCTTTCCCAAGTGTTGATGGTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAGAGAGACAGCAATACATGGGCTTTCCCAAGTGTTGATGGTTGC  850

seq1  TGTGGGCATAGAGCTTGTATGCATAATGTACATATTTTCCTTATTGAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCATAGAGCTTGTATGCATAATGTACATATTTTCCTTATTGAGGA  900

seq1  ATGTTCTCTCTGCCAAGGTTATTGCCTCCATGATAATCAGAGACAGCAGG  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATGTTCTCTCTGCCAAGGTTATTGCCTCCATGATAATCAGAGACAGCA-G  949

seq1  AGTCCTGG-AAGTGACAGTGTGTCTATGTCTCAGAAAAAAAAAAAAAAAA  999
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGGAAAGTGACAGTGTGTCTATGTCTCAGAAAAAAAAAAAAAAAA  999

seq1  AA-GGTAGAATGCAGTGACCTTCAAAACAGCCATTATGG-TTGTGGGAAA  1047
      || ||||| |||||||||||||||||||||||| ||||| ||||||||||
seq2  AAGGGTAG-ATGCAGTGACCTTCAAAACAGCCA-TATGGTTTGTGGGAAA  1047

seq1  GAATACTGAAAATATGAGTTCAAAAATATATAATTTCCAAACTATGCAAA  1097
      |||||||||||||||||||||||||| |||| || | | | |||||   |
seq2  GAATACTGAAAATATGAGTTCAAAAA-ATAT-ATATTCTACCTATGGCCA  1095

seq1  ACGCAAGGATGCAATATGAATTGTATAAGGAGCTTCACAGATCTAAAGGA  1147
      ||||||| |||| ||||| || |||| ||||||||  ||||||||   ||
seq2  ACGCAAGAATGC-ATATGGATGGTAT-AGGAGCTT--CAGATCTA---GA  1138

seq1  ACAGTGGCAGCTACAGTATGAACTAG--CTTGTCGGAAAG  1185
       | | | |||||||||| ||||||||   ||||| |||||
seq2  CCTG-GCCAGCTACAGT-TGAACTAGACTTTGTC-GAAAG  1175


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