BAC Information

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BAC

Clone NameB6Ng01-330E11
Chromosome3 (Build37)
Map Location 125,516,757 - 125,517,645
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668820, Ndst4
Downstream geneUgt8a, Arsj, Camk2d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330E11.bB6Ng01-330E11.g
ACCGA117004GA117005
length887657
definitionB6Ng01-330E11.b B6Ng01-330E11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgaacccttattcagtggcatttttgtatttctagaaagaac
atgttcaaaattcaaatttaaaacacagagcctcagctaacatctaagtt
ctgttgtgtgagatgcgtggggcccaagcatagacactagaggacatggc
aaccgactattatttattttaagttggtaaatttgtataaatcacatcag
tgaatttataactcctaataaaaagtggcctgagaaaaatgtcaagatac
taccacgctctttctaatatatcaagagcaagaagccagaagtattcatg
agcctgtatcctggggacagaatgtgtaatgttaacagacaacaggaaag
attggacttctttattcctgttgaggtttgcctgtttcttagaggaaaaa
gatgcttcagccagaaaagataaagtagtcacttccaagtgtgaattaac
ctttaaggaaggtgagctggttctccaaatgatcctggcaaatgaatgat
ttcctattccaggtaagccaggggaatacatatgtgcatttctgcccttc
acatgctttgtggacttgtgaacaacacaaggaatgttataatattggga
acaagaaatagcattctttttttcctaatagagcacgcaggagattgatg
cactacagatcactggacttgaaagaatgcgagaaagccgtctaagaaac
aggagttttacaaggttggttggccatgctctgtgactttcccgggtttc
tgagcagaatttatgagaactgtcatgcaaggggggagaggggggcaaag
ggaggggctgtggagagaaatgactagggaggagctggctcaatgtctga
agggagattcgatccaatgagtgtctgatgctaaggg

gaattccatcgtgcctgggaatgctgcacacccatcagccaggaatgaaa
gttccccattctgtacctacacattcttttggttttggttttgtttgttt
acatttcatttgtttattacctgttttgctttgttttggtctcagccatt
tatacttggataagataaaatctaaagcagttttaatttgcattttgcca
gtgcccaagaatgttgaacatttttttaaggcttctcagccatcttccgc
agtcatgttgcagatctgctctccgccaatgattttattcttctccctca
tttctacctaggctttgaaggtttggtttttcaatgtcattgagcatgcc
ttgtacactccttatctgtggagttttgtttgtttttgctttcttggttt
ttgttgttattgttgttgttgtcgttttttaattattttgtctagatcta
catgatcttgaagtcttggcactctatcttctgcttgattcctactattt
gtaagagtttcttttgagttttctagttgaattactgggtttttcattga
gttttctttgatgtttgtatctcctgattcaattctgttctcaaatcctg
gattgtctttgtccttttgtcttatgtttttgtggggtttttttttgagg
ggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_125516757_125517645
seq2: B6Ng01-330E11.b_47_932 (reverse)

seq1  CCTTAAGCATCAGAACACTCTTTGGATCTGAATCTCCATTCAGACATTGA  50
      |||| |||||||| |||||| ||||||| |||||||| ||||||||||||
seq2  CCTT-AGCATCAG-ACACTCATTGGATC-GAATCTCCCTTCAGACATTGA  47

seq1  GCCCTGCTCCT-CCTAGTCATTTCTCTCCACAGCCCCTCCCTTTGCCCCC  99
      | || |||||| ||||||||||||||||||||||||||||||||||||||
seq2  G-CCAGCTCCTCCCTAGTCATTTCTCTCCACAGCCCCTCCCTTTGCCCCC  96

seq1  CTCTCCCCCCTTGCATGACAGTTCTCATAAATTCTGCTCAGAAACCCGGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCCCTTGCATGACAGTTCTCATAAATTCTGCTCAGAAACCCGGG  146

seq1  AAAGTCACAGAGCATGGCCAACCAACCTTGTAAAACTCCTGTTTCTTAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCACAGAGCATGGCCAACCAACCTTGTAAAACTCCTGTTTCTTAGA  196

seq1  CGGCTTTCTCGCATTCTTTCAAGTCCAGTGATCTGTAGTGCATCAATCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTTCTCGCATTCTTTCAAGTCCAGTGATCTGTAGTGCATCAATCTC  246

seq1  CTGCGTGCTCTATTAGGAAAAAAAGAATGCTATTTCTTGTTCCCAATATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGTGCTCTATTAGGAAAAAAAGAATGCTATTTCTTGTTCCCAATATT  296

seq1  ATAACATTCCTTGTGTTGTTCACAAGTCCACAAAGCATGTGAAGGGCAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATTCCTTGTGTTGTTCACAAGTCCACAAAGCATGTGAAGGGCAGA  346

seq1  AATGCACATATGTATTCCCCTGGCTTACCTGGAATAGGAAATCATTCATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACATATGTATTCCCCTGGCTTACCTGGAATAGGAAATCATTCATT  396

seq1  TGCCAGGATCATTTGGAGAACCAGCTCACCTTCCTTAAAGGTTAATTCAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGATCATTTGGAGAACCAGCTCACCTTCCTTAAAGGTTAATTCAC  446

seq1  ACTTGGAAGTGACTACTTTATCTTTTCTGGCTGAAGCATCTTTTTCCTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGAAGTGACTACTTTATCTTTTCTGGCTGAAGCATCTTTTTCCTCT  496

seq1  AAGAAACAGGCAAACCTCAACAGGAATAAAGAAGTCCAATCTTTCCTGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAGGCAAACCTCAACAGGAATAAAGAAGTCCAATCTTTCCTGTT  546

seq1  GTCTGTTAACATTACACATTCTGTCCCCAGGATACAGGCTCATGAATACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTAACATTACACATTCTGTCCCCAGGATACAGGCTCATGAATACT  596

seq1  TCTGGCTTCTTGCTCTTGATATATTAGAAAGAGCGTGGTAGTATCTTGAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTTCTTGCTCTTGATATATTAGAAAGAGCGTGGTAGTATCTTGAC  646

seq1  ATTTTTCTCAGGCCACTTTTTATTAGGAGTTATAAATTCACTGATGTGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTCAGGCCACTTTTTATTAGGAGTTATAAATTCACTGATGTGAT  696

seq1  TTATACAAATTTACCAACTTAAAATAAATAATAGTCGGTTGCCATGTCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACAAATTTACCAACTTAAAATAAATAATAGTCGGTTGCCATGTCCT  746

seq1  CTAGTGTCTATGCTTGGGCCCCACGCATCTCACACAACAGAACTTAGATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTCTATGCTTGGGCCCCACGCATCTCACACAACAGAACTTAGATG  796

seq1  TTAGCTGAGGCTCTGTGTTTTAAATTTGAATTTTGAACATGTTCTTTCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGAGGCTCTGTGTTTTAAATTTGAATTTTGAACATGTTCTTTCTA  846

seq1  GAAATACAAAAATGCCACTGAATAAGGGTTCAGTGAATTC  889
      ||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACAAAAATGCCACTGAATAAGGGTTCAGTGAATTC  886


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