BAC Information

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BAC

Clone NameB6Ng01-330J24
Chromosome3 (Build37)
Map Location 82,931,228 - 83,055,704
singlet/doubletdoublet
Overlap geneEG627094, Dchs2
Upstream geneGucy1a3, Mtap9, Npy2r, LOC100041940, EG633285, Lrat, Fgg, Fga, Fgb, Plrg1
Downstream gene1700028M03Rik, LOC100042007, LOC100042091, Sfrp2, LOC633522, Tlr2, D930015E06Rik, Mnd1, Trim2, EG624713
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330J24.bB6Ng01-330J24.g
ACCGA117233GA117234
length1,053115
definitionB6Ng01-330J24.b B6Ng01-330J24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,055,076 - 83,055,704)(82,931,228 - 82,931,342)
sequence
gaattcaagccccaaagggagactcttaatcaggagaactgagactagat
tggaaaaaataaacattgtaaacagaaaagactcacccttgaaaagaaat
taataaagacaaagaagaaaggaagagagaaaaactgaagtgttcacaca
ggttgagagtcaagaaaaaagaaaagacgtgggagaaagggacagggttc
ctggtcacgccatgtcacagagaggattttaaatcaagttttgttcctta
ctattagcggaattcccaggcaaatccttgggaggttgcagtagtaattc
aaaccactttacaactagttctgttgtcatttattcatttatttcacaaa
tatttactgataggatatctcagggctttttttattattgctactggctt
tggtagaagtgggctttatggtaaaagaaaagttactaaaacacaacaac
tccataagatgattaccatatttgagtacttcaccttcttctcttccttg
agaatgtctgttggcagagcatgtgaggtggccattatggaaaaacacat
actgagagcccacagagtgcaaagtagaaatcttcttctgggtgtctgtc
cagtgaaaataaggtcagtccgctgagaagacacctgctctcttctttgc
tttgtggcattatccataacggcccggatctggaatggtctaaagtgccc
attagtacatgggctgaggaaaatgtcatgcatgtgtgccaggctgctta
gccttccagaggacataactatcacttatgtaaacatagatatcctggaa
gacacagtgctaagtggaaagagacatactcaaaaacatcaacaatgacc
tcacttttatgtggaagtcaaaagaaaaagtcagtttgacagcagctgag
aacaaaatagcagtcaacagagactaagactgagggaaacaggaggacct
cgtaaaagggtattttgtgtcactcaagcaaagtgggatttcagactatc
tattgtacaggatactaactatataatgttagacctggtggctttaaaca
gat
atcccggtgcgagccgcatcacgcacggggaggggactaaggagtaggag
gcccagtcagagggggctccacggagtccccagcgccgggagacgcggga
ggtggagtggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_83055076_83055704
seq2: B6Ng01-330J24.b_49_677 (reverse)

seq1  TTCTCAGCGGACTGACCTTATTTTCACTGGACAGACACCCAGAAGAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGCGGACTGACCTTATTTTCACTGGACAGACACCCAGAAGAAGAT  50

seq1  TTCTACTTTGCACTCTGTGGGCTCTCAGTATGTGTTTTTCCATAATGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTTGCACTCTGTGGGCTCTCAGTATGTGTTTTTCCATAATGGCC  100

seq1  ACCTCACATGCTCTGCCAACAGACATTCTCAAGGAAGAGAAGAAGGTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACATGCTCTGCCAACAGACATTCTCAAGGAAGAGAAGAAGGTGAA  150

seq1  GTACTCAAATATGGTAATCATCTTATGGAGTTGTTGTGTTTTAGTAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCAAATATGGTAATCATCTTATGGAGTTGTTGTGTTTTAGTAACTT  200

seq1  TTCTTTTACCATAAAGCCCACTTCTACCAAAGCCAGTAGCAATAATAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTACCATAAAGCCCACTTCTACCAAAGCCAGTAGCAATAATAAAA  250

seq1  AAAGCCCTGAGATATCCTATCAGTAAATATTTGTGAAATAAATGAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCTGAGATATCCTATCAGTAAATATTTGTGAAATAAATGAATAAA  300

seq1  TGACAACAGAACTAGTTGTAAAGTGGTTTGAATTACTACTGCAACCTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAACAGAACTAGTTGTAAAGTGGTTTGAATTACTACTGCAACCTCCC  350

seq1  AAGGATTTGCCTGGGAATTCCGCTAATAGTAAGGAACAAAACTTGATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTTGCCTGGGAATTCCGCTAATAGTAAGGAACAAAACTTGATTTA  400

seq1  AAATCCTCTCTGTGACATGGCGTGACCAGGAACCCTGTCCCTTTCTCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTCTCTGTGACATGGCGTGACCAGGAACCCTGTCCCTTTCTCCCA  450

seq1  CGTCTTTTCTTTTTTCTTGACTCTCAACCTGTGTGAACACTTCAGTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTTTCTTTTTTCTTGACTCTCAACCTGTGTGAACACTTCAGTTTTT  500

seq1  CTCTCTTCCTTTCTTCTTTGTCTTTATTAATTTCTTTTCAAGGGTGAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTCCTTTCTTCTTTGTCTTTATTAATTTCTTTTCAAGGGTGAGTC  550

seq1  TTTTCTGTTTACAATGTTTATTTTTTCCAATCTAGTCTCAGTTCTCCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTTTACAATGTTTATTTTTTCCAATCTAGTCTCAGTTCTCCTGA  600

seq1  TTAAGAGTCTCCCTTTGGGGCTTGAATTC  629
      |||||||||||||||||||||||||||||
seq2  TTAAGAGTCTCCCTTTGGGGCTTGAATTC  629

seq1: chr3_82931228_82931342
seq2: B6Ng01-330J24.g_70_184

seq1  ATCCCGGTGCGAGCCGCATCACGCACGGGGAGGGGACTAAGGAGTAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCGGTGCGAGCCGCATCACGCACGGGGAGGGGACTAAGGAGTAGGAG  50

seq1  GCCCAGTCAGAGGGGGCTCCACGGAGTCCCCAGCGCCGGGAGACGCGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGTCAGAGGGGGCTCCACGGAGTCCCCAGCGCCGGGAGACGCGGGA  100

seq1  GGTGGAGTGGGGTGG  115
      |||||||||||||||
seq2  GGTGGAGTGGGGTGG  115