BAC Information

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BAC

Clone NameB6Ng01-334C15
Chromosome3 (Build37)
Map Location 38,034,801 - 38,035,203
singlet/doubletsinglet
Overlap genenone
Upstream geneIl21, Cetn4, Bbs12, LOC100041328, Fgf2, LOC100040649, Nudt6, Spata5, LOC665778, Spry1, EG381438, LOC100038875, LOC100041338, EG626367, 4930556A17Rik, LOC665811, EG665821
Downstream geneLOC100041366, LOC100040785, LOC665838, Ankrd50, LOC100041378, LOC665855, LOC100040824, Fat4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334C15.bB6Ng01-334C15.g
ACCGA119736GA119737
length1,235397
definitionB6Ng01-334C15.b B6Ng01-334C15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtttgtgagtacataattgagtatttttttcatcaatgttcat
aaaggaaattggtatgaagttctttctttgttgagtctttgtttggttta
ggtatcatggtgactacgtccccattgaatcagacaatgttccttctgtt
tattttttgtcgaatcgtttgcaaaatattggtatttgcacttctgatag
cattctgcactaaaaccatctggccctgaacttttttggttgggaaactt
ttaatgactgcttctatttcctaagaggaaatatgacagtttagttggtt
tacttgatcttgatttaactttgataagtgtaatctatcaagaaaatagt
ccattttctttagattttccaatttttgtggcgtacaggctttggacaca
caaaccaatgattgtttggatttcctcagtggctattgtcatgtcatgtc
cctctttgccacacccactccagtagttactcacgtgacaggcccaaaag
catggacacagtcccgaggcaaaaagttcacagaaacttagtctccttga
accatggcatcctgtatgacaaatgctccaaatctgtccttgctttagtt
ggtgaatggatctgtgtgctttccctcaatattgttttattataggtgcc
tccaagaaatgatttttacaaatacctaaatcaggttgaactttactccc
tggctttcaccaatgtcctaggcagtccttgagctgaccctgggcttgga
atttcgtaagaatgttattcatccagatgaaatcccccagtgttgacagt
tagtaatcagtcacctcagtttgccaataggagctagtattctcagggat
ggttcaaaatagtaaacttagaattctcattatagacatgaatggcagcc
tactttacataatagtagaaagtagtaggttgtggttttaggaggaactg
aagtattgtattattcatgaaaggattagtagatggaattcccctggtga
agtttttcactagccaagaagaatagcataatcaagttattactaggacc
ctggtagtgggtttaacaatagatagcattgccatcgagcattcacttgg
ctcctgtctagctgatctaagaatggtgttcctatctcagttaaaacagc
tgatccaacatcctttatgtatgccatttcttgttgtaagaacactatgg
ctccctcataccatggcggtgaaattgccaaccat
tccatacctcgatgcactccattgccaggagagaggaaaacaccccatgc
gctttcatttttcttccttcaaaagcccaaacatccagtctttggatggg
tttcaaccctgctttcattcattaaaaagcgaaacaaaaccatcactggc
ttccttgacagcagtcaggtttcactgggtcttcccactcctgccaagcg
gcacaagttctattcagcccagtcaaggtccttgaagctcagcgcgagtg
gagcccattcaagcacatagagacggggacccacgggtgtggggtacaag
ccagtgtactggtgcgtgggaagtcttaactacaaacttcaaaagaagcc
ttcggggaaagctatgtgaaggcccaaatcgggggtggggggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_38034801_38035203
seq2: B6Ng01-334C15.g_67_469

seq1  GAATTCTCCATACCTCGATGCACTCCATTGCCAGGAGAGAGGAAAACACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATACCTCGATGCACTCCATTGCCAGGAGAGAGGAAAACACC  50

seq1  CCATGCGCTTTCATTTTTCTTCCTTCAAAAGCCCAAACATCCAGTCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCGCTTTCATTTTTCTTCCTTCAAAAGCCCAAACATCCAGTCTTTG  100

seq1  GATGGGTTTCAACCCTGCTTTCATTCATTAAAAAGCGAAACAAAACCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTTTCAACCCTGCTTTCATTCATTAAAAAGCGAAACAAAACCATC  150

seq1  ACTGGCTTCCTTGACAGCAGTCAGGTTTCACTGGGTCTTCCCACTCCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTTCCTTGACAGCAGTCAGGTTTCACTGGGTCTTCCCACTCCTGC  200

seq1  CAAGCGGCACAAGTTCTATTCAGCCCAGTCAAGGTCCTTGAAGCTCAGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCGGCACAAGTTCTATTCAGCCCAGTCAAGGTCCTTGAAGCTCAGCG  250

seq1  CGAGTGGAGCCCATTCAAGCACATAGAGACGGGGACCCACGGGTGTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGGAGCCCATTCAAGCACATAGAGACGGGGACCCACGGGTGTGGGG  300

seq1  TACAAGCCAGTGTACTGGTGCGTGGGAAGTCTTAACTACAAACTTCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGCCAGTGTACTGGTGCGTGGGAAGTCTTAACTACAAACTTCAAAA  350

seq1  GAAGCCTTCGGGGAAAGCTATGTGAAGGCCCAAATCGGGGGTGGGGGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTTCGGGGAAAGCTATGTGAAGGCCCAAATCGGGGGTGGGGGGGG  400

seq1  TGG  403
      |||
seq2  TGG  403