BAC Information

Click to search

BAC

Clone NameB6Ng01-338G21
Chromosome3 (Build37)
Map Location 151,038,006 - 151,039,149
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040455, LOC100040463, LOC623554
Downstream geneEltd1, Ifi44, H28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2, Dnajb4, Fubp1, Nexn, C030011O14Rik, Usp33
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338G21.bB6Ng01-338G21.g
ACCGA122739GA122740
length1,1351,051
definitionB6Ng01-338G21.b B6Ng01-338G21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaatgtcagagtccaggtgttacttaattgtagccgaccttttc
taacagaaatgagaatagaggaagagtgatgtgatttgatcatgtatctg
cagctttggagttttattatccttcttttaaaaatactaactgggtaact
ttcttctccagcttccttctcctgctgacacatatgaatttgtcctgaaa
taatgtccagagctttctaaacataggttactgggaaagtgagctcttca
tttaagtgattttcattttagacttattggaaaattccagcacatgtatt
ttcacattgtaaggtagttctctgctctaatgcctttagttttcagtgag
cacttacattccactgatgaaaactaatacatgcagagtaagtactaaaa
tactatggttcagaaaatagggtaggttacatggctctgtaaggacaaac
aacaaattagtcttttccctttgctctgtgtgtaagttaaaggtcaggct
tattgctattattgctaagtaaataaatcacaaatgttttgtgtgtgtta
tatatttagtaaaatgcttttgttttaattccctcgttctgacacgattg
ctctgaaatatctatctgtttatcctctagtgccccaagttctatggcaa
taatttcaatcactgttggtttccaatgcagtttgtgattctcagacaca
ctatatctaatgaggccctggagcaactatagttgaacaagtctacagat
tcaatggaatcatccctttctaattcctgagttactatttcctacatact
aataatggaaatcaaattatttactaataatctggcatttaaaaaatagc
ttctccactactatagagtcccatatcaaagatgaatgtttcttctttga
taatttcctaaattttccaagttaggaaagaggaagaaaagaagaagaag
taggctacctttgtgagaagaataacaataaacttaagtgtcttggtctc
ttgataccactgcaacaagaatctgtaagccagaatgtattacaaaatag
aatgtacaatagaataattattctggacactgaaaggtctagggtgaccg
ctgtatttgaaaaagccaatgctacaaaaatcgag
gaattcagagctatgagctttccttttagcactgctgtcattgtgtccca
taagtttgggtatgctgtgccttcattttcattatattctaaaaaaaaaa
accctttaatttcttcatttatttcctcattgaccaagttcttatttagt
agggcattgttcagcttccatgtatatgtgggctttctatttttgttgtt
attgaagatcagccttagtctttgatgatctgataggatgaatggtatta
tttcaatctacttgtatcaattgaagagggttttgagactgatcatatgg
tcaattttgaagaaggtaccatgagatgctgagaagaaggtatattcttt
tgttttaagatgaaatgttctatagatatctgttaaaaccacttggttca
tcatttctgttattttcctgtgtctttatttagtttgggtttccatgatc
tgtctgtccattgatgagtgtgggatgttgaagtctcccactatgattgt
atgcagtgcagtgtattcattgagctttagtaaagtttcttttatgaatg
tgggtgcccctgcatttggagcataaatgttcagaattgagaatttttct
tggtagactttttgtttgatgagtatgaagtgttcttccttatctttttt
tgataacttttggttgaaagtctattttattcgatattagaatggctact
ccagcttgtttcttgggaccatttgcttggaaaattgttttccagccctt
actctaaggtagtatatgtttttgatactgaagtgcatttcctgtatgca
gcaaaatgctgggtcctgtttacatatccagtcttttagtctatgtcttt
ttattggggaattgtgccatggatgttaagagatataaggaaaagtgatg
gttgcttcatgttattttgttgtagagtgaatatgttgtatgactacatc
tttaggtcatgaagaagattacttctgcttttctatggtatgattctctt
cttgtgttggatattatctttgtaggctggaattgtgtgaaagaatttgt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_151038006_151039149
seq2: B6Ng01-338G21.b_45_1179

seq1  GAATTCTAATGTCAGAGTCCAGGTGTTACTTAATTGTAGCCGACCTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATGTCAGAGTCCAGGTGTTACTTAATTGTAGCCGACCTTTTC  50

seq1  TAACAGAAATGAGAATAGAGGAAGAGTGATGTGATTTGATCATGTATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGAAATGAGAATAGAGGAAGAGTGATGTGATTTGATCATGTATCTG  100

seq1  CAGCTTTGGAGTTTTATTATCCTTCTTTTAAAAATACTAACTGGGTAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTGGAGTTTTATTATCCTTCTTTTAAAAATACTAACTGGGTAACT  150

seq1  TTCTTCTCCAGCTTCCTTCTCCTGCTGACACATATGAATTTGTCCTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCCAGCTTCCTTCTCCTGCTGACACATATGAATTTGTCCTGAAA  200

seq1  TAATGTCCAGAGCTTTCTAAACATAGGTTACTGGGAAAGTGAGCTCTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCCAGAGCTTTCTAAACATAGGTTACTGGGAAAGTGAGCTCTTCA  250

seq1  TTTAAGTGATTTTCATTTTAGACTTATTGGAAAATTCCAGCACATGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTGATTTTCATTTTAGACTTATTGGAAAATTCCAGCACATGTATT  300

seq1  TTCACATTGTAAGGTAGTTCTCTGCTCTAATGCCTTTAGTTTTCAGTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTGTAAGGTAGTTCTCTGCTCTAATGCCTTTAGTTTTCAGTGAG  350

seq1  CACTTACATTCCACTGATGAAAACTAATACATGCAGAGTAAGTACTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACATTCCACTGATGAAAACTAATACATGCAGAGTAAGTACTAAAA  400

seq1  TACTATGGTTCAGAAAATAGGGTAGGTTACATGGCTCTGTAAGGACAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGGTTCAGAAAATAGGGTAGGTTACATGGCTCTGTAAGGACAAAC  450

seq1  AACAAATTAGTCTTTTCCCTTTGCTCTGTGTGTAAGTTAAAGGTCAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATTAGTCTTTTCCCTTTGCTCTGTGTGTAAGTTAAAGGTCAGGCT  500

seq1  TATTGCTATTATTGCTAAGTAAATAAATCACAAATGTTTTGTGTGTGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTATTATTGCTAAGTAAATAAATCACAAATGTTTTGTGTGTGTTA  550

seq1  TATATTTAGTAAAATGCTTTTGTTTTAATTCCCTCGTTCTGACACGATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTAGTAAAATGCTTTTGTTTTAATTCCCTCGTTCTGACACGATTG  600

seq1  CTCTGAAATATCTATCTGTTTATCCTCTAGTGCCCCAAGTTCTATGGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAATATCTATCTGTTTATCCTCTAGTGCCCCAAGTTCTATGGCAA  650

seq1  TAATTTCAATCACTGTTGGTTTCCAATGCAGTTTGTGATTCTCAGACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCAATCACTGTTGGTTTCCAATGCAGTTTGTGATTCTCAGACACA  700

seq1  CTATATCTAATGAGGCCCTGGAGCAACTATAGTTGAACAAGTCTACAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCTAATGAGGCCCTGGAGCAACTATAGTTGAACAAGTCTACAGAT  750

seq1  TCAATGGAATCATCCCTTTCTAATTCCTGAGTTACTATTTCCTACATACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGAATCATCCCTTTCTAATTCCTGAGTTACTATTTCCTACATACT  800

seq1  AATAATGGAAATCAAATTATTTACTAATAATCTGGCATTTAAAAAATAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGGAAATCAAATTATTTACTAATAATCTGGCATTTAAAAAATAGC  850

seq1  TTCTCCACTACTATAGAGTCCCATATCAAAGATGAATGTTTCTTCTTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCACTACTATAGAGTCCCATATCAAAGATGAATGTTTCTTCTTTGA  900

seq1  TAATTTCCTAAATTTTCCAAGTTAGGAAAGAGGAAAGAAAAAGAAAGAAA  950
      |||||||||||||||||||||||||||||||||||   |||||||   ||
seq2  TAATTTCCTAAATTTTCCAAGTTAGGAAAGAGGAA--GAAAAGAA--GAA  946

seq1  GAAGTAGGCTACCTTTGTGAGAAGAATAACAATAAACTTAAGTGTCTTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGGCTACCTTTGTGAGAAGAATAACAATAAACTTAAGTGTCTTGG  996

seq1  TCTCTTGATACCACTGCAACAAGAATTCTGTAAGCCAGGAAATGTA-TAC  1049
      ||||||||||||||||||||||||| ||||||||||||  |||||| |||
seq2  TCTCTTGATACCACTGCAACAAGAA-TCTGTAAGCCAG--AATGTATTAC  1043

seq1  AAAATAGAAATGTAC-ATAG-ATAATTAATCTGGACACTGAGAAGTCTAG  1097
      ||||||| ||||||| |||| ||||||| |||||||||||| | ||||||
seq2  AAAATAG-AATGTACAATAGAATAATTATTCTGGACACTGAAAGGTCTAG  1092

seq1  GGTTGACGCTGTATTTGGAAAAAAGCACATGGCTAACAAAAATCGAG  1144
      |||   |||||||||||  ||||||| ||  ||| ||||||||||||
seq2  GGTGACCGCTGTATTTG--AAAAAGC-CAATGCT-ACAAAAATCGAG  1135