BAC Information

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BAC

Clone NameB6Ng01-346D22
Chromosome3 (Build37)
Map Location 151,635,401 - 151,636,562
singlet/doubletsinglet
Overlap geneLOC100040597
Upstream geneEltd1, Ifi44, H28, Ptgfr, LOC100040741
Downstream geneLOC676548, Gipc2, Dnajb4, Fubp1, Nexn, C030011O14Rik, Usp33, Zzz3, Ak5, LOC100040705, Pigk, Rpl29-ps1, St6galnac5
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346D22.bB6Ng01-346D22.g
ACCGA128196GA128197
length2541,143
definitionB6Ng01-346D22.b B6Ng01-346D22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tatagccaggcagtggtggcacactcctttaatcccagcacttgggaggc
agaggtgggaacttctgagttccaggccagcctactctacagagtgagtt
ccaggacatccagggctacacagagaaactctgtctcgaaaaaccaatag
atagatagatacatagatagatagatagatagatagatagatagatagat
agatagatagatagatagatgaaaggtagatagatagatagatagataga
taga

gaattctggggcaatattatttttcctagtacttaaaaacgttagcttgc
tctttttgtgaggccttctaggcagttagctgtgtcaagatgaagctgag
ttatttctttccagccaccagctgttggaaactcactgaatgacaaggta
gccttcatatgctctgtgagaagttcatggcaacagaaggagctgctaag
gttctaggtgagaagtgaagggttgtgtggtctgactcagcggtgggatg
acaaacaaggttttcccatgaagcaaggagttttgactcatggcagaata
tgcctgctatcgagtaaggggcattcctgttggagaccagggagaaatga
agagaggaagcacacatctgtccatgactgcattgtggatgccagtctaa
gcattctccacttggttattgtcaagaaaggacagaaggaagaagattcc
tggactaactgaccctattgtgcctccttggctgggacctaaaaggacca
gcagaatccaaaagcttttttgatttctctaaagaagatgatgtctgcta
gtatgttgtcagaaagcccttaaacaatgacgataagaagcccaggccca
aaccacccaagattcagcatcttgtgcaacacaaacaccaatatggtcct
ctgaagaaacaatgtgctaaagaaaacaaggaggaggctgcagaatatgg
taagctttggccaggagaatgaaggaagccaaagaaaagcatcaggaaca
gattgctaagaaatagaggctgtcctcactgagaacatctacttctgagt
ccgtcaacaataagtctttaaagagtaacaaataggtaatcagaccttga
accaccaccaccaccaccaccaccaccaccaaccaaaccagatgaacaag
gaaaaagcaactgagggtattctgttctagggtctagagtttcaaggaga
aattgtttgctaatctcatgaaagtcccgcttggtgagaacctatcccct
ctgctgctctgaagactctctttcttctatgagagtttacgtgtgagtct
ttctaaagctactggactcgttgtgagattgagggccatagagtctgcct
atctgtccattcatcctgtctctggctcattggtgtctgctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_151635401_151636562
seq2: B6Ng01-346D22.g_66_1208 (reverse)

seq1  CCAGCAGACACACAACCGAAGCCAGGAGGACAGGGGAGTGATGGGACAGA  50
      ||||||||||| |||    ||||||   ||||||    |||  |||||||
seq2  CCAGCAGACAC-CAA--TGAGCCAG--AGACAGG---ATGAATGGACAGA  42

seq1  TAGACAGGACTCTAT-GCCCTCCATCCTCACAAACGAGTTCAAGTTAAGC  99
      ||| || |||||||| |||||| || ||||| |||||| || |||  |||
seq2  TAGGCA-GACTCTATGGCCCTCAAT-CTCAC-AACGAG-TCCAGT--AGC  86

seq1  TTTAG-AAGACTCACACGTAAACTCTCAATAGGAAGAAAGGAGAGTCTTC  148
      ||||| ||||||||||||||||||||| ||| ||||||| ||||||||||
seq2  TTTAGAAAGACTCACACGTAAACTCTC-ATA-GAAGAAA-GAGAGTCTTC  133

seq1  AGAGCAGCCAGAGGGGATAGGTTCTCACCAAAGCGGGACTTTCAATGAGA  198
      ||||||| ||||||||||||||||||||| ||||||||||||| ||||||
seq2  AGAGCAG-CAGAGGGGATAGGTTCTCACC-AAGCGGGACTTTC-ATGAGA  180

seq1  TTAGCAAACAATTTCTCCTTGAAAACTCTAGACCCTAGAACAGAATACCC  248
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTAGCAAACAATTTCTCCTTG-AAACTCTAGACCCTAGAACAGAATACCC  229

seq1  TCAGTTGCTTTTTCCTTGTTCATCTGGTTTGGTTGGTGGTGGTGGTGGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGCTTTTTCCTTGTTCATCTGGTTTGGTTGGTGGTGGTGGTGGTG  279

seq1  GTGGTGGTGGTGGTTCAAGGTCTGATTACCTATTTGTTACTCTTTAAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGTGGTGGTTCAAGGTCTGATTACCTATTTGTTACTCTTTAAAGA  329

seq1  CTTATTGTTGACGGACTCAGAAGTAGATGTTCTCAGTGAGGACAGCCTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGTTGACGGACTCAGAAGTAGATGTTCTCAGTGAGGACAGCCTCT  379

seq1  ATTTCTTAGCAATCTGTTCCTGATGCTTTTCTTTGGCTTCCTTCATTCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTAGCAATCTGTTCCTGATGCTTTTCTTTGGCTTCCTTCATTCTC  429

seq1  CTGGCCAAAGCTTACCATATTCTGCAGCCTCCTCCTTGTTTTCTTTAGCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCAAAGCTTACCATATTCTGCAGCCTCCTCCTTGTTTTCTTTAGCA  479

seq1  CATTGTTTCTTCAGAGGACCATATTGGTGTTTGTGTTGCACAAGATGCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTTCTTCAGAGGACCATATTGGTGTTTGTGTTGCACAAGATGCTG  529

seq1  AATCTTGGGTGGTTTGGGCCTGGGCTTCTTATCGTCATTGTTTAAGGGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGGGTGGTTTGGGCCTGGGCTTCTTATCGTCATTGTTTAAGGGCT  579

seq1  TTCTGACAACATACTAGCAGACATCATCTTCTTTAGAGAAATCAAAAAAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACAACATACTAGCAGACATCATCTTCTTTAGAGAAATCAAAAAAG  629

seq1  CTTTTGGATTCTGCTGGTCCTTTTAGGTCCCAGCCAAGGAGGCACAATAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGATTCTGCTGGTCCTTTTAGGTCCCAGCCAAGGAGGCACAATAG  679

seq1  GGTCAGTTAGTCCAGGAATCTTCTTCCTTCTGTCCTTTCTTGACAATAAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTTAGTCCAGGAATCTTCTTCCTTCTGTCCTTTCTTGACAATAAC  729

seq1  CAAGTGGAGAATGCTTAGACTGGCATCCACAATGCAGTCATGGACAGATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGAGAATGCTTAGACTGGCATCCACAATGCAGTCATGGACAGATG  779

seq1  TGTGCTTCCTCTCTTCATTTCTCCCTGGTCTCCAACAGGAATGCCCCTTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTCCTCTCTTCATTTCTCCCTGGTCTCCAACAGGAATGCCCCTTA  829

seq1  CTCGATAGCAGGCATATTCTGCCATGAGTCAAAACTCCTTGCTTCATGGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGATAGCAGGCATATTCTGCCATGAGTCAAAACTCCTTGCTTCATGGG  879

seq1  AAAACCTTGTTTGTCATCCCACCGCTGAGTCAGACCACACAACCCTTCAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTTGTTTGTCATCCCACCGCTGAGTCAGACCACACAACCCTTCAC  929

seq1  TTCTCACCTAGAACCTTAGCAGCTCCTTCTGTTGCCATGAACTTCTCACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACCTAGAACCTTAGCAGCTCCTTCTGTTGCCATGAACTTCTCACA  979

seq1  GAGCATATGAAGGCTACCTTGTCATTCAGTGAGTTTCCAACAGCTGGTGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATATGAAGGCTACCTTGTCATTCAGTGAGTTTCCAACAGCTGGTGG  1029

seq1  CTGGAAAGAAATAACTCAGCTTCATCTTGACACAGCTAACTGCCTAGAAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGAAATAACTCAGCTTCATCTTGACACAGCTAACTGCCTAGAAG  1079

seq1  GCCTCACAAAAAGAGCAAGCTAACGTTTTTAAGTACTAGGAAAAATAATA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACAAAAAGAGCAAGCTAACGTTTTTAAGTACTAGGAAAAATAATA  1129

seq1  TTGCCCCAGAATTC  1162
      ||||||||||||||
seq2  TTGCCCCAGAATTC  1143


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