BAC Information

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BAC

Clone NameB6Ng01-347A01
Chromosome3 (Build37)
Map Location 17,159,376 - 17,160,260
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040034, LOC100040059, EG383936
Downstream geneLOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347A01.bB6Ng01-347A01.g
ACCGA128739GA128740
length885659
definitionB6Ng01-347A01.b B6Ng01-347A01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattccaatcatgtgaataagcaggagccatgagtatatatgtgg
gaaatcctgctttccttttttctaaacagtcatcgtttgtttgttcattt
acatttcaggtttctttattttttgaccagaagcaactgtcttatcgtaa
ttcatggtaaccaaatagtgtcttcttacattttctgaaagaaaactaat
aacaatgagggtctcaagttttctcaatcttgtccctgatgtagccatct
actgaaagtctgactctttgctactctgcctccgcttacactcccacctc
ttgaaagtcactctgagaattatccaatcctgttccagggactcaaagta
aaagtgcccagctaactctctctctctttgctactgttaacagtgtctat
tgctctacttccattggtaattgccaagcatgatatggttttctttttgc
ctttacgtggtccctgaacaaaaagcagttggggatgatctgtaagaatt
gtttctttctaggcagttgctgaccatcttaataaagactcccaaataca
gtatctgttttatttgagtgatccttggggtctttgtctcacaacacatc
aaaaacaaaattcaaccctaatgtctttgttacacaatgttgaacaattg
gataaagttcattaaagatactacttggagaagaagcatacttttttcct
actgttacttcacatattagaattcccatgactctattagaaaaaaattg
tcagtattttttaaacttgtatgttttagcatctacatatttaaataatt
tactagaagtaacttcaaagtcctcactgtattcatagtttcatattcct
atagtttgtttttgggtgggaatgaaggagttgga

gaattcctgatctttccaaatcatgaatggatttgaattttgacaaatgc
tttctcctcatctaacaagatgatcacgtggtttttgtctttgagtttgt
ttatatagtggattacattgatggattttcatatattcaaccatccctgc
attacaggttgaagcctacttgatcatgatggatgatcgttttgatatgt
tcctggatttggtttgcaataattttattaagtatttttcaccgatattc
ataagggatattgttctaaagtactctttctttctttgttggggtttctg
tggtttaggtatcagagtaattgtggcttcatagaatgaattgggtagaa
taacttttgtttcaaatttgtggaacattttgaggagaattggaattagg
tcttctttgaaagtctgacagaactctgcactaaggccatcagttcctgg
gctttgttgttgttgttgttgttgttgttgttgttgttgagagatgatta
atgaccgctttctacttttttaggggaaatgggactgtttagattgctaa
tctgatcctgatttaactttggtacctggtatctgtctaagaaattgtcc
atttcatgcagattttccattttttgtttgagtatagccttatgtagtag
gatctgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_17159376_17160260
seq2: B6Ng01-347A01.b_47_931

seq1  GAATTCATTCCAATCATGTGAATAAGCAGGCAGCCTTGAGTATATATGTG  50
      |||||||||||||||||||||||||||||| |||| ||||||||||||||
seq2  GAATTCATTCCAATCATGTGAATAAGCAGG-AGCCATGAGTATATATGTG  49

seq1  GGAAATCCTGCTTTCCTTTTTTCTACAACAGTCATCGTTTGTTTGTTCAT  100
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGAAATCCTGCTTTCCTTTTTTCTA-AACAGTCATCGTTTGTTTGTTCAT  98

seq1  TTACATTTCAGGTTTCTTTATTTTTTGACCAGAAGCAACTGTCTTATCGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTCAGGTTTCTTTATTTTTTGACCAGAAGCAACTGTCTTATCGT  148

seq1  AATTCATGGTAACCAAATAGTGTCTTCTTACATTTTCTGAAAGAAAACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGGTAACCAAATAGTGTCTTCTTACATTTTCTGAAAGAAAACTA  198

seq1  ATAACAATGAGGGTCTCAAGTTTTCTCAATCTTGTCCCTGATGTAGCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATGAGGGTCTCAAGTTTTCTCAATCTTGTCCCTGATGTAGCCAT  248

seq1  CTACTGAAAGTCTGACTCTTTGCTACTCTGCCTCCGCTTACACTCCCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGAAAGTCTGACTCTTTGCTACTCTGCCTCCGCTTACACTCCCACC  298

seq1  TCTTGAAAGTCACTCTGAGAATTATCCAATCCTGTTCCAGGGACTCAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAAGTCACTCTGAGAATTATCCAATCCTGTTCCAGGGACTCAAAG  348

seq1  TAAAAGTGCCCAGCTAACTCTCTCTCTCTTTGCTACTGTTAACAGTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTGCCCAGCTAACTCTCTCTCTCTTTGCTACTGTTAACAGTGTCT  398

seq1  ATTGCTCTACTTCCATTGGTAATTGCCAAGCATGATATGGTTTTCTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCTACTTCCATTGGTAATTGCCAAGCATGATATGGTTTTCTTTTT  448

seq1  GCCTTTACGTGGTCCCTGAACAAAAAGCAGTTGGGGATGATCTGTAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTACGTGGTCCCTGAACAAAAAGCAGTTGGGGATGATCTGTAAGAA  498

seq1  TTGTTTCTTTCTAGGCAGTTGCTGACCATCTTAATAAAGACTCCCAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCTTTCTAGGCAGTTGCTGACCATCTTAATAAAGACTCCCAAATA  548

seq1  CAGTATCTGTTTTATTTGAGTGATCCTTGGGGTCTTTGTCTCACAACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCTGTTTTATTTGAGTGATCCTTGGGGTCTTTGTCTCACAACACA  598

seq1  TCAAAAACAAAATTCAACCCTAATGTCTTTGTTACACAATGTTGAACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAACAAAATTCAACCCTAATGTCTTTGTTACACAATGTTGAACAAT  648

seq1  TGGATAAAGTTCATTAAAGATACTACTTGGAGAAGAAGCATACTTTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAAAGTTCATTAAAGATACTACTTGGAGAAGAAGCATACTTTTTTC  698

seq1  CTACTGTTACTTCACATATTAGAATTCCCATGACTCTATTAGAAAAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTTACTTCACATATTAGAATTCCCATGACTCTATTAGAAAAAAAT  748

seq1  TGTCAGTATTTTTTAAACTTGTATGTTTTAGCATCTA-ATATTTAAATAA  799
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGTCAGTATTTTTTAAACTTGTATGTTTTAGCATCTACATATTTAAATAA  798

seq1  TTTACTAGAAGTAACTTCAAAGTCCTCACTGTATTCATAGTTTCATATTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAGAAGTAACTTCAAAGTCCTCACTGTATTCATAGTTTCATATTC  848

seq1  CTATAGTTTGTTTTT-GGTGGGAATGAAGGAGTTGGA  885
      ||||||||||||||| |||||||||||||||||||||
seq2  CTATAGTTTGTTTTTGGGTGGGAATGAAGGAGTTGGA  885


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