BAC Information

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BAC

Clone NameB6Ng01-347B09
Chromosome3 (Build37)
Map Location 41,658,849 - 41,660,045
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2, EG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e
Downstream geneLOC666031, LOC100039204
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347B09.bB6Ng01-347B09.g
ACCGA128797GA128798
length1,2251,185
definitionB6Ng01-347B09.b B6Ng01-347B09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatcttcccaagactgttatcatgaatgggtgttggattttg
tcaaatggtttctctgcatcaaaggagattattatgtgttttgttttttt
ttctttgagtttgtttatataatggattactttgatgggtttccgtatat
taaaccatccctgcatccctggaataaaactgacttggtcaggatcgatg
attgttttgatgtgttcttggattaggttagtgagaattttattgtgtat
ttttcatcgatattcataagggaaattggtctgaagttctctatctttgc
tgggtctttctatggtttaggtatcagaataattgtgacttcatagaata
aattcagtagagtaccttcggctactattttgtgcataactggaattaga
tcttctttgaagttctgatagaactctgcactaaacccatctggtcctgg
gctttttttttttttttggttgggagaccattagtgactgcttctatttc
tttagaggatataagactgtttagatcattaacttgatcctgatttaact
ttggtacctggtatctgtctaaaaatttgtccatttcatccaggttttcc
agtttcattgagaatagccttttgtaaaaggatctgatggtgttttggat
ttcttcaggataagttgttatgtctcccttttcattcctggttttgttaa
ttaggatgctgtccctgtgccctctagtgagtctggctaagggtttatct
atcttgttgatttttctcaaagaaccagctcctcctttggttgattcttc
gaatagttcttcttgtttccacttggttgatttcgcccctgagtttggtt
atttcctgctgtgtattcctcttgggtgaatttgcttcttttgttctaga
gcttttagcgtattgtcaagctgctagtgtgttgctctctctactttctt
tttggaggcaactcagaggtatgagtttccctcttagaaatgctttcatt
gtgtcccataagtttgggtatgttgtgcttcatttcatactctaaagtct
taatttctttcttttattctcttgacagtatcatgagaaggagtgtggtc
agttcatgtgatgttgcctttctatatttattcattatgagatcagcctt
agtcatggggtgatgatgcatggacattcaatttggatcggtggagggcc
tgtttctgtcgacaacattagcact

gaattcttaagatggcttggatccagagatataaatttaggaaggcaatg
aacaaagatgtgggttagaataagccaggcatagttaagatgcagagaac
aatgattgaagcacaaaaagatttttattaaatgtatttatttattcact
ttacaagaccatatcagctcttcctcgcctcacagtgctccatgatggga
atcctcccccattctaccttccccttctcttttgggaagggaagccctcc
tctggggctttctcttcctcatgactggttatgggaatccagcttgatct
gagtgtagctgtctggagttagaactactgcacacgtccttgagaaattg
ggctgttttttccacagtttcctagagtgctgagtacacaaaagcattat
tacaatgtatgtggagctttatgagtggagcctggcgccatccgcagctg
gatcctgtctggtgtctttgatagtattatagattgagattaagctggga
cattccacctagggtatggtctcattgctgtctatatgcaacctttctgt
ggcccaacttgtagggactccctggttttgctattactcatgaccaggct
tcttccagtgcatcctagttctttctggctttgattgttttgaagaatct
agtgaccagttcccatacacagtgggattgcatttttccataccctggga
tattataaggtggtaataaataaacacagaaataagcctcttacggagtt
tacacctttgcacgtaaaccctccataaccttgatgggttcttactttgt
ctttgctttgttctccaaaaccttaagaacgtgtggcattccacaatcaa
gcaggtcccttaggtctgcttcgcatcaactcaggcttcactacacttcc
agaaaaggtatttttaagtaattttctccatttgaataattttcctgaga
ttatctatgatcatttaaattgcatcttcttttttcagttctttttattt
tatagatattttctttatttacatccaaatgctatcctgaaagttcccta
caccctccccctgccctgctccctacccaccccactcccacttctggccc
tggtgttccctgaactggggcatataagtttgcaatactagggtctctct
ccagtgagggctgactaggccacttctggctacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41658849_41660045
seq2: B6Ng01-347B09.g_67_1251 (reverse)

seq1  ATGTAG-CAGAAGATGGCCTAGTCAGCCATCACTGGGAAGAGAGGCCCCT  49
      |||||| |||||| |||||||||||||| |||||||  |||||| |||  
seq2  ATGTAGCCAGAAG-TGGCCTAGTCAGCCCTCACTGG--AGAGAGACCC--  45

seq1  TAGTATTGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAG  99
      ||||||||||||| |||||||||||||| || ||||||||||||||| ||
seq2  TAGTATTGCAAAC-TTATATGCCCCAGTTCA-GGGAACACCAGGGCC-AG  92

seq1  AAGTGGGAGT-GGGTGGGTAGGGGAGCAGGGCAGGGGGAGGGTGTAGGGA  148
      |||||||||| ||||||||| |||||||||||||||||||||||||||||
seq2  AAGTGGGAGTGGGGTGGGTA-GGGAGCAGGGCAGGGGGAGGGTGTAGGGA  141

seq1  ACTTTCAGGATAGCATTTGGAATGTAAATAAAGAAAATATCTAATAAAAT  198
      |||||||||||||||||||| ||||||||||||||||||||| |||||||
seq2  ACTTTCAGGATAGCATTTGG-ATGTAAATAAAGAAAATATCT-ATAAAAT  189

seq1  AAAAAAGAAACTGAAAAAAAGAAGATGCAATTTAAATGATCATAGATAAT  248
      |||||   ||||| ||||||||||||||||||||||||||||||||||||
seq2  AAAAA--GAACTG-AAAAAAGAAGATGCAATTTAAATGATCATAGATAAT  236

seq1  CTCAGGAAAATTATTCAAATGGAGAAAATTACTTAAAAATACCTTTTCTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAAAATTATTCAAATGGAGAAAATTACTTAAAAATACCTTTTCTG  286

seq1  GAAGTGTAGTGAAGCCTGAGTTGATGCGAAGCAGACCTAAGGGACCTGCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTAGTGAAGCCTGAGTTGATGCGAAGCAGACCTAAGGGACCTGCT  336

seq1  TGATTGTGGAATGCCACACGTTCTTAAGGTTTTGGAGAACAAAGCAAAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTGGAATGCCACACGTTCTTAAGGTTTTGGAGAACAAAGCAAAGA  386

seq1  CAAAGTAAGAACCCATCAAGGTTATGGAGGGTTTACGTGCAAAGGTGTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTAAGAACCCATCAAGGTTATGGAGGGTTTACGTGCAAAGGTGTAA  436

seq1  ACTCCGTAAGAGGCTTATTTCTGTGTTTATTTATTACCACCTTATAATAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCGTAAGAGGCTTATTTCTGTGTTTATTTATTACCACCTTATAATAT  486

seq1  CCCAGGGTATGGAAAAATGCAATCCCACTGTGTATGGGAACTGGTCACTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGTATGGAAAAATGCAATCCCACTGTGTATGGGAACTGGTCACTA  536

seq1  GATTCTTCAAAACAATCAAAGCCAGAAAGAACTAGGATGCACTGGAAGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTCAAAACAATCAAAGCCAGAAAGAACTAGGATGCACTGGAAGAA  586

seq1  GCCTGGTCATGAGTAATAGCAAAACCAGGGAGTCCCTACAAGTTGGGCCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCATGAGTAATAGCAAAACCAGGGAGTCCCTACAAGTTGGGCCA  636

seq1  CAGAAAGGTTGCATATAGACAGCAATGAGACCATACCCTAGGTGGAATGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGGTTGCATATAGACAGCAATGAGACCATACCCTAGGTGGAATGT  686

seq1  CCCAGCTTAATCTCAATCTATAATACTATCAAAGACACCAGACAGGATCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTTAATCTCAATCTATAATACTATCAAAGACACCAGACAGGATCC  736

seq1  AGCTGCGGATGGCGCCAGGCTCCACTCATAAAGCTCCACATACATTGTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCGGATGGCGCCAGGCTCCACTCATAAAGCTCCACATACATTGTAA  786

seq1  TAATGCTTTTGTGTACTCAGCACTCTAGGAAACTGTGGAAAAAACAGCCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTTTTGTGTACTCAGCACTCTAGGAAACTGTGGAAAAAACAGCCC  836

seq1  AATTTCTCAAGGACGTGTGCAGTAGTTCTAACTCCAGACAGCTACACTCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTCAAGGACGTGTGCAGTAGTTCTAACTCCAGACAGCTACACTCA  886

seq1  GATCAAGCTGGATTCCCATAACCAGTCATGAGGAAGAGAAAGCCCCAGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGCTGGATTCCCATAACCAGTCATGAGGAAGAGAAAGCCCCAGAG  936

seq1  GAGGGCTTCCCTTCCCAAAAGAGAAGGGGAAGGTAGAATGGGGGAGGATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTTCCCTTCCCAAAAGAGAAGGGGAAGGTAGAATGGGGGAGGATT  986

seq1  CCCATCATGGAGCACTGTGAGGCGAGGAAGAGCTGATATGGTCTTGTAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCATGGAGCACTGTGAGGCGAGGAAGAGCTGATATGGTCTTGTAAA  1036

seq1  GTGAATAAATAAATACATTTAATAAAAATCTTTTTGTGCTTCAATCATTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATAAATAAATACATTTAATAAAAATCTTTTTGTGCTTCAATCATTG  1086

seq1  TTCTCTGCATCTTAACTATGCCTGGCTTATTCTAACCCACATCTTTGTTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGCATCTTAACTATGCCTGGCTTATTCTAACCCACATCTTTGTTC  1136

seq1  ATTGCCTTCCTAAATTTATATCTCTGGATCCAAGCCATCTTAAGAATTC  1197
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTTCCTAAATTTATATCTCTGGATCCAAGCCATCTTAAGAATTC  1185


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