BAC Information

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BAC

Clone NameB6Ng01-348K06
Chromosome3 (Build37)
Map Location 16,078,635 - 16,079,755
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039985, LOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484
Downstream geneYthdf3, LOC100040034, LOC100040059
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348K06.bB6Ng01-348K06.g
ACCGA129878GA129879
length1,2391,120
definitionB6Ng01-348K06.b B6Ng01-348K06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatcttttaagggggttatttgatt
ttctggagtccaccctcttgagttctctatatatattggatattagtccc
ctatctgatttatgataggtaaagatccttttccaatctgttggtggcct
ttttgtcttattgacagtgtcttttgccttacagaagctttgcagtttca
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtgtctctggttttacgtgaagttccttgatccact
tagatttgaccttagttcaaggagataggaatggatcgattcgcattctt
ctacatgataacagccagttgtgccagcaccatttgttgaaaatgctgtc
tttcttccactggatggttttagctcccttgtcgaagatcaagtgaccat
aggtgtgtgcgttcatttctgggtcttcaattctattccattggtctact
tgtctgtcactataccagcaccatgcagtttttataacaactgctctgta
gtaaagctttaggtcaggcatggtgattccaccagaggtacttttatcct
tgagagagcttttgctaccctaggatttttgttattccagatgaatttgc
agattgctctttctaattcgttgaagaattgatttggaattttgatgggg
attgcattgaatctgtagattgcttttgacaagatagccatttttacttt
attgatcctgccaatccatgagcatgggagatctttcaatcttctgagat
cttcttttaatttctttcttcagagacttgaaaggttttatcatacagat
ctttcacttccttaagttagagtcacgccaagatagttaaactattttgt
tgactattgaggacggtgttgtttccctaatttcttttctcagcctgttt
attctttgtgtagagaaaggccattgacttgtttgagttaattttatatc
agtacttcactgaagctgtttatcagttagaagttgtctgtgatttaagg
gtccacttaataatactatcatatcatctgccaaaagtgatattcgactt
caacgttcaattgattcctgaatccgttgtgtcgaattgcctggcataga
acttcaagaacataggtgtcgaacagagtatgggcaatg
gaattcctaactgtgtagctttgctttgcatcaggaagaactaaaacatt
tacctggctctgatagtctttttactctctgtgctcattttggaaattct
gtcctgtcagttagggatgggaaatgaaaacatgctcctattttgggaag
tttaagttattcacttcagggcagtaaggaacttcaggcctgattgattt
gcttggaaacaatcactgatatctaccctcatcaatgtttaatgatacaa
aacttgatagaagtaagaactaaggccaactaagtcatggggggagtaca
cttgtaattctagcatttaggaggctgtgtcagtaagatcatgacttgga
ggatgccagcctggatgagactgtatctcaaaacaaacagaaaaatggaa
agaaattctagttagcatcatgttgcatggttccgtacaggtcagaatta
aagctctggaaatttttgtttttatgttaattaaactagattgtggaatt
ttgtcttatttagtcataatatccaggaagtaagaaaaaccatttggtac
tgaagaaagttaagtatccatagctccatttgtatttttagtgtgacttt
tgggtcctgtgaagaagctttactcaatgctgtcttataatttgtattca
ttatcccaaaactaggcgggacggaaactgtcatggtgactggcccctaa
aacatttaaaacgttggggaaataaacgcatcagagaagcagatggggct
cctcagaaggagctgctggcaatgggctgttaatcattgattactgacaa
agggaggataagctcagcgccgaattcctggaatttcctcaaggcttcac
caaatatagtaaaacgaacatttagcagccaatcagaaaccaacccctgt
aacttctctagcacctaacaatgaagtcttaggtatctaaccatcactaa
aattcctagagttcccaaaaacagacttgcgctcctttgtctgaagtcac
catgctagttagtgttcaccccggcatgcagcctatggcctttctcaaaa
taaaagcacttctggcctaactgcatatgtggatgctgtctcagtggtca
ctttcgaatgtaacaatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_16078635_16079755
seq2: B6Ng01-348K06.g_61_1180

seq1  GAATTCCTAACTGTGTAGCTTTGCTTTGCATCAGGAAGAACTAAAACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACTGTGTAGCTTTGCTTTGCATCAGGAAGAACTAAAACATT  50

seq1  TACCTGGCTCTGATAGTCTTTTTACTCTCTGTGCTCATTTTGGAAATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGCTCTGATAGTCTTTTTACTCTCTGTGCTCATTTTGGAAATTCT  100

seq1  GTCCTGTCAGTTAGGGATGGGAAATGAAAACATGCTCCTATTTTGGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTCAGTTAGGGATGGGAAATGAAAACATGCTCCTATTTTGGGAAG  150

seq1  TTTAAGTTATTCACTTCAGGGCAGTAAGGAACTTCAGGCCTGATTGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTATTCACTTCAGGGCAGTAAGGAACTTCAGGCCTGATTGATTT  200

seq1  GCTTGGAAACAATCACTGATATCTACCCTCATCAATGTTTAATGATACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAAACAATCACTGATATCTACCCTCATCAATGTTTAATGATACAA  250

seq1  AACTTGATAGAAGTAAGAACTAAGGCCAACTAAGTCATGGGGGGAGTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGATAGAAGTAAGAACTAAGGCCAACTAAGTCATGGGGGGAGTACA  300

seq1  CTTGTAATTCTAGCATTTAGGAGGCTGTGTCAGTAAGATCATGACTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAATTCTAGCATTTAGGAGGCTGTGTCAGTAAGATCATGACTTGGA  350

seq1  GGATGCCAGCCTGGATGAGACTGTATCTCAAAACAAACAGAAAAATGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCAGCCTGGATGAGACTGTATCTCAAAACAAACAGAAAAATGGAA  400

seq1  AGAAATTCTAGTTAGCATCATGTTGCATGGTTCCGTACAGGTCAGAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTCTAGTTAGCATCATGTTGCATGGTTCCGTACAGGTCAGAATTA  450

seq1  AAGCTCTGGAAATTTTTGTTTTTATGTTAATTAAACTAGATTGTGGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTGGAAATTTTTGTTTTTATGTTAATTAAACTAGATTGTGGAATT  500

seq1  TTGTCTTATTTAGTCATAATATCCAGGAAGTAAGAAAAACCATTTGGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTATTTAGTCATAATATCCAGGAAGTAAGAAAAACCATTTGGTAC  550

seq1  TGAAGAAAGTTAAGTATCCATAGCTCCATTTGTATTTTTAGTGTGACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAAGTTAAGTATCCATAGCTCCATTTGTATTTTTAGTGTGACTTT  600

seq1  TGGGTCCTGTGAAGAAGCTTTACTCAATGCTGTCTTATAATTTGTATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCTGTGAAGAAGCTTTACTCAATGCTGTCTTATAATTTGTATTCA  650

seq1  TTATCCCAAAACTAGGCGGGACGGAAACTGTCATGGTGACTGGCCCCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCCAAAACTAGGCGGGACGGAAACTGTCATGGTGACTGGCCCCTAA  700

seq1  AACATTTAAAACGTTGGGGAAATAAACGCATCAGAGAAGCAGATGGGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTAAAACGTTGGGGAAATAAACGCATCAGAGAAGCAGATGGGGCT  750

seq1  CCTCAGAAGGAGCTGCTGGCAATGGGCTGTTAATCATTGATTACTGACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAAGGAGCTGCTGGCAATGGGCTGTTAATCATTGATTACTGACAA  800

seq1  AGGGAGGATAAGCTCAGCGCCGAATTCCTGGAATTTCCTCAAGGCTTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGATAAGCTCAGCGCCGAATTCCTGGAATTTCCTCAAGGCTTCAC  850

seq1  CAAATATAGTAAAACGAACATTTAGCAGCCAATCAGAAACCAACCCCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATAGTAAAACGAACATTTAGCAGCCAATCAGAAACCAACCCCTGT  900

seq1  AACTTCTCTAGCACCTAACAATGAAGTCTTAGGTTATCTAACCATCACTA  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AACTTCTCTAGCACCTAACAATGAAGTCTTAGG-TATCTAACCATCACTA  949

seq1  AAATTCCTAGAGTTTCCCAAAACAGACTTGCGCTCCTTTGTCTGAAGTCA  1000
      |||||||||||||| || ||||||||||||||||||||||||||||||||
seq2  AAATTCCTAGAGTTCCCAAAAACAGACTTGCGCTCCTTTGTCTGAAGTCA  999

seq1  CCATGCTAGTAAGTGGTCAACCCCGGCATGCAGGCTTATTG-CTTTCTCA  1049
      |||||||||| |||| || ||||||||||||| || ||| | ||||||||
seq2  CCATGCTAGTTAGTGTTC-ACCCCGGCATGCA-GCCTATGGCCTTTCTCA  1047

seq1  AAATAAAAGCACTCCT-GCCT-ACTGCATATGTGAGTGGTGGTCTCAGTG  1097
      ||||||||||||| || |||| ||||||||||||  || | |||||||||
seq2  AAATAAAAGCACTTCTGGCCTAACTGCATATGTGGATGCT-GTCTCAGTG  1096

seq1  GGCACTTTTGGATGTAACAATGGA  1121
      | |||||| | |||||||||||||
seq2  GTCACTTTCGAATGTAACAATGGA  1120