GCGGCCGCTATACGACTCCTATTCGCGAGAGGATCCGCGGAATTCAATGC
TTTTTCAGTAGCTTACTTCACTTGTATTTTTGGCCTTAGAATCAAGACTG
CCATAATTTTAAAATATATTCACTCTTTCTATAAGAAATATTACTCCATT
TACTGATCTGTTCATTCATTGCATATAAATCTGATTACCTATTGCCTGGA
ATATGCAATTATGTGAAGCAGAATAGAAAATTAGACTCAAATTTTTCATT
TCTAATTACCTGAAAATGTCATTGTTTCTTGAAATAGTCTTTCTGTTTAA
GTATAGATTCTGTAGTTTCTCTGAGAAGTTTCAACTCATCATGGGAAACA
GATCAAATAACATGCCCTCTTTGAAAGATGTCTTGACCATCTTCAACACT
GGCACAACTAAATTTAAACACTTCTGGGATCCTCTTGAACATATTAAATT
GTAATATATTTACTATAACCTTGATTTAGGTACTTGTCAATCAGCTTAAG
TACTTCAAAGGTAGGCACTGCCACGTACTCTTCTAAGTGTTCTAGGACCT
AAGAAATGGCAAAAAATCTTATTCAAATAAATAGACTAAAGAACATATCT
ATCCACCAATGACCTATTGCATTAATGAAAACACAAATAAACGAGTAACC
AGAACAACCAAATCCAATAGTACTGTAGACGCC

CAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTCATGTTGATTGCTACAGTTAGTGG
TTTACAGGATTTTTGCCTTGAAATTCTGCCCTGATTTCTCCAAAGGGCAG
ACTATAAATTGTAAGCTGAAGTGAACCCCTTTCTCTTCAAATTGATTTTG
GTCATGTAATAAAAACACAAATTGAGACAGTAATTGGTACTAAGGTAGTG
CTGTGACCATCTATTTTTGGAAGTACTGTGCAAAGAGTTTGGAGTTTTGG
GCTAGGAAAGCCAGTAGGTACTCAGAAATCAATGAGTTGTTGTAGGATCC
TAGAAGATGAGAATGATGAGAAAAATGCAGAGGATGTAGCCTCACCATGT
AACAAATCAGAGGGAATTTTCAAGGGTTCTTCAAAGACTCTGTTTGGGCT
GCTAATATGATATTTTGCATTGAGAATACATGGTTTCTGGTCATCAGTGA
GTGAAAAATCAGTTTTACCTAAGAAGAGACCATCATCACTTACACAACAC
TCTTACTATAATGGATCTATAGACACTGGTCATTGAGTGTGGAAAAATGA
GCTGTGATCAAAAGAGGGTAACAACACTGAAGCAAAATATTACAAGAGGG
CTTCTTACAGGGCAGCATGCAGAGATCATCCTACCTTGCCCA

Query= MSMg01no046_c08.b1 MSMg01no046_c08.b1 CHROMAT_FILE:
MSMg01no046_c08.b1 PHD_FILE: MSMg01no046_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:15 2005
         (519 letters)



>mm_chr3_42342400_42343318
          Length = 919

 Score =  946 bits (489), Expect = 0.0
 Identities = 504/509 (99%)
 Strand = Plus / Minus

                                                                       
Query: 11  ttcaatgctttttcagtagcttacttcacttgtatttttggccttagaatcaagactgcc 70
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 ttcaatgctttttaagtagcttacttcacttgtatttttggccttagaatcaagactgcc 660

                                                                       
Query: 71  ataattttaaaatatattcactctttctataagaaatattactccatttactgatctgtt 130
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 659 ataattttaaaatatattcactctttctataagaaatattactccatttactgatctgct 600

                                                                       
Query: 131 cattcattgcatataaatctgattacctattgcctggaatatgcaattatgtgaagcaga 190
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cattcatttcatataaatctgattacctattgcctggaatatgcaattatgtgaagcaga 540

                                                                       
Query: 191 atagaaaattagactcaaatttttcatttctaattacctgaaaatgtcattgtttcttga 250
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 atagaaaattagactcaaatttttcatttctaattacctgaaaatgtcattgtttcttga 480

                                                                       
Query: 251 aatagtctttctgtttaagtatagattctgtagtttctctgagaagtttcaactcatcat 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aatagtctttctgtttaagtatagattctgtagtttctctgagaagtttcaactcatcat 420

                                                                       
Query: 311 gggaaacagatcaaataacatgccctctttgaaagatgtcttgaccatcttcaacactgg 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gggaaacagatcaaataacatgccctctttgaaagatgtcttgaccatcttcaacactgg 360

                                                                       
Query: 371 cacaactaaatttaaacacttctgggatcctcttgaacatattaaattgtaatatattta 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cacaactaaatttaaacacttctgggatcctcttgaacatattaaattgtaatatattta 300

                                                                       
Query: 431 ctataaccttgatttaggtacttgtcaatcagcttaagtacttcaaaggtaggcactgcc 490
           |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 299 ctataatcttgatttaggtacttgtcaatcagcttaagtacttcaaaggcaggcactgcc 240

                                        
Query: 491 acgtactcttctaagtgttctaggaccta 519
           |||||||||||||||||||||||||||||
Sbjct: 239 acgtactcttctaagtgttctaggaccta 211


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space:   462681
Effective search space used:   462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)